Array 1 35357-38315 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPP010000013.1 Arcanobacterium phocae strain 13645 NODE_13_length_55069_cov_65.015475, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 35357 29 100.0 33 ............................. ATGATTTTAATATCGATATACCAATTCGTACTT 35419 29 100.0 32 ............................. TTCCGCAACGCCGTTGAGGAAGCACACATCAC 35480 29 100.0 32 ............................. CAGATACCTACACCGCACGTCGAGCGGATAGA 35541 29 100.0 32 ............................. CTGAATACGAAAATAGCCGGCGTGTTAAACCG 35602 29 100.0 32 ............................. GGCGTAATCAATTTCTTTGTAAATTCCTCAGC 35663 29 100.0 32 ............................. AAATCTTCTTCACAGGGGGACTTCCCTGCTGG 35724 29 100.0 32 ............................. GCCATGCGTGCGTTGCGAGCGTTCCTATTAGC 35785 29 100.0 32 ............................. ATTGATTGTTAATGCGTCATTGAAGCGTGCAT 35846 29 100.0 32 ............................. AAGCTATTGCATTATTTACGAAGTTTGCCATT 35907 29 100.0 32 ............................. TGAATACTGAATCAACCCGGCGTTCAACGCTC 35968 29 100.0 32 ............................. TGATCGAAGATTTCTATGAGGTTCAAGCGAAT 36029 29 100.0 32 ............................. ACTGAGAAACAACCCCAGCCCCAGGAACCGTT 36090 29 100.0 33 ............................. AGTGGCTCCGTTGAGGAGTAGTACGAAATGATT 36152 29 100.0 32 ............................. CGTCTAAGTTGCCCCTTAGGCGGTCATCTATA 36213 29 93.1 32 ..........................G.G GTGATGGGTTCGCCACTGGCCTTCTACCAGTA 36274 29 100.0 32 ............................. ATTTTCGGACATAACTTCTTCTCACCTACCGC 36335 29 100.0 32 ............................. GATTTGTGCCCAGTCGTCGAGGTTCTCCCCGA 36396 29 100.0 32 ............................. GACATCGGAAAGGGTTGGATCCCATGAGCGCT 36457 29 100.0 32 ............................. GTTTTGACGTTCCATGGAATCCCGCCATTTGC 36518 29 100.0 32 ............................. AATTTCGAGCTATGCGATCGGCAGGAACGCTG 36579 29 100.0 32 ............................. AGGCTCTACGAGATAGCGGAAGGAGTTGGGAA 36640 29 100.0 32 ............................. GGTTCGTCCTCTATCCTGCCTGCACTACTTTT 36701 29 100.0 32 ............................. GAAAAGATCATTGAAAACCGTCCACGGCTACA 36762 29 100.0 32 ............................. TGTTCCAGTAATAAAGCTAGCTATTTCTTTGA 36823 29 100.0 32 ............................. AGCTTATATCGAGAGTCTAACTGGCGAGAACC 36884 29 100.0 32 ............................. GAATGCGTAAGGTTTTCGAAGTGTAGTCATAC 36945 29 100.0 32 ............................. GACTTGGAAGGTGCTATCTCGCCGACCTTCCT 37006 29 96.6 33 ............................A CCAAAAGCTACTCGGAAGGCGCGTTCTTCGGGG 37068 29 100.0 32 ............................. CTCGGCCTGGGCTGGTGTTATAGTTTTTTCAT 37129 29 96.6 32 ............................T TAGTGCAGTACCGGAGTTGGCGTACACGGATG 37190 29 100.0 32 ............................. GAGATACCGTTCACGAAACCACGGATAACGTT 37251 29 100.0 32 ............................. CGTTATCAACATCGAAAATCTGGCTAGACTCC 37312 29 100.0 32 ............................. ATACTGTAAATTCCTCCTGTCCACTCTCCCGG 37373 29 100.0 32 ............................. TGGTGTGCCTGTCGAGTTACTTGCTGGACCTC 37434 29 100.0 32 ............................. ATCAGCGAATATTCCCGCCCGTCCAGTGACGG 37495 29 100.0 32 ............................. TTGCGAGTCTTGATTGTAGCGCCGATAATCGT 37556 29 100.0 32 ............................. TATATCCGAAGGGCTGGATTGTCAAGAACGCT 37617 29 100.0 32 ............................. GAGCCACCCCAAGACAACCGTTAAAGAATCCA 37678 29 100.0 32 ............................. TGCTTTGGTGCGCGCTGCTGAGCTGATGGCGC 37739 29 100.0 32 ............................. ACAGCTTCGAGAATGGCAAGAAGCTGGTCGCC 37800 29 100.0 31 ............................. TACACGGGGGAGCTTTTTGAAGCTACTCCAG 37860 29 100.0 32 ............................. AAGGTCTAATCCTTCCGCCTGGTCAAGAGGGT 37921 29 89.7 32 ..........................CTT TCTCGCATTGCTGCAAGATTTGCTGTACTTGT 37982 29 100.0 32 ............................. AGGAGGTGCGCTAAAAATCGAGCTAGTAGATG 38043 29 100.0 32 ............................. ACATCATGGTATGCCCTCCAAACCGTTGAAGA 38104 29 100.0 32 ............................. TTGCTGTGTAGGACGAAATCGTTGAAATGGTT 38165 29 100.0 32 ............................. GGTGGAATTAGCTGTGCGTCTTGCACTTTCGC 38226 29 96.6 32 ............................G TGCTCGCGGACATGACGTGACGCGCACCGTCG 38287 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================= ================== 49 29 99.4 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGCTTTCGTTAGT # Right flank : CAAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //