Array 1 452-20 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQAU01000044.1 Limosilactobacillus fermentum strain DSM 20055 Scaffold44, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 451 36 100.0 30 .................................... TAAAGCATCGGCCGCGTCGATCTTGTTTGA 385 36 100.0 30 .................................... TTATTTTGCACGTGTGATCAGTGCTTTCTA 319 36 100.0 30 .................................... TCCATGTTGTAAACGTTGGTTCCAAGCCCA 253 36 100.0 30 .................................... CCGATCCCGTCTAGCGTGGTGGCGGTCTGG 187 36 100.0 30 .................................... CAGTTAACAGCTTTAGATCGATTGGCTGCC 121 36 100.0 30 .................................... GACGAAAACATCGCCGGTTACTTATCGGAG 55 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC # Left flank : AATCCAACCAAGCTTGATAGCTACCAAATAGCACTTGATAAGATGATTGTCAAAAATCTTAGCATTCAGAAACGAGATCGGATGAATGACCTTGCTCGTGAGGTGTTCTCAGAGATGCAAGATTCTTTGTTCGAATTCGACTTACCGTTGGAGGTGCGGTATGACGAGAGCCTCTTGAGATTATACAAATATGCGAAAATTAAATATTTGACGCAAGTAATAAGGCAACCTTATGGTATAATTGAAACCGATCTAAAATTACATCTCGAATTAAAAGACTGTCAGGTTCTTGGGTATTGTAATGTCGCTAATTACTTATTGCCTGAGCAGATACAGGAATTCGCTACTCTTGTTGAGAAAACCGAATTGGCAGTTTTATTAGTGGAATTCTCAGAAAAGAGAGAAACTCTACAACAACTCAAACAGGATATTTACCGGATTGATCGGGACTTCATGGACTGGCACGAATAGATCGTTAGTTTTTGATGAGAAAATAACGG # Right flank : CGATGAAGTGCCTGGTTTTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [16.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //