Array 1 25005-25829 **** Predicted by CRISPRDetect 2.4 *** >NZ_VADW01000084.1 Campylobacter coli strain MON351 1011800084, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 25005 36 91.7 29 ...A.T.C............................ AAATCATATTTGCTTTGCTTGTTTTGTTA 25070 36 100.0 30 .................................... TATTGCTACCCCTATGTTTTAATTCTTGTA 25136 36 100.0 30 .................................... TTTAATCCTTTGAAAATGGTGTGCTTTGCG 25202 36 100.0 30 .................................... AGATTAAAAGATAATGATTTGCTAAGGCGT 25268 36 100.0 30 .................................... AATGGAAGTAGAATTATATTTGCAGGAATT 25334 36 100.0 29 .................................... ACCAATTCTAGAGCTTAGCTGTCCATACT 25399 36 100.0 30 .................................... TATAACAGTTACACAGGGTGAAGATTAATG 25465 36 100.0 30 .................................... AATATCATAACGGATGTTTTATTGACACCA 25531 36 100.0 29 .................................... CCAAATATCAGTATAACTCCAATCAATAA 25596 36 100.0 30 .................................... CATTTATTGTCATGGAACTGATATCCCCTG 25662 36 100.0 30 .................................... AAAGCATTACATGTTCAGGACCATCATGTC 25728 36 100.0 30 .................................... TAATTTGGTGTGCATTGCCTAGGATCGCTT 25794 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 99.4 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT # Left flank : AAAGGGAGTAGAATTAATCAAAGCAAAAAATAACGGCGATAACTTAGAATTTTATGATCCACGAAGTTTAAAAAATGCAAAAAATGTTCACCCACAAAGATATAGTTTTTGGTTACAACGGGAATTTACGCCTATGCACAATGTTTTAGATGAGAAAGATTATTATAAAAAACTTGTTTTTACTATCAATAAAAGCAAAGATGATAAGCCTGAATTATACAGCATAATTTGCTTTAAATATAAGGCTGAAAATTGTGATATTGATAAGTCATCAGTAAATTAATAATGCCTTAAGGCATTATTTTTTATTTATCGCATTTTTTAAAGCTTTCAAATAATAAAAAGCTTCGGATAATGTAGGTATTTTGATAAAAGCGTCCCTTTTATCATCTTCAAAATATTCTAAAGTCAAATAATAATTTTGATTTTCATCAGCACATCTTATTACTTTATATTGGATTATACCTTTTCTTTTTTGATTTTCATTTAAACAAATTCTC # Right flank : TAGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCTTGTCTAATTTTATTAGACTTAGTTTTGTTTTCTTTACATATCTTGTCATTGCTGTATTTAAAATCTTGTGTTTTTTCATCGTATTCAAAAAGAACTAAATTTTTATCATCATTCATTTTTTCATTAAAAGTAACTCCACCTAAAAGTATTTGCATATTGTCAAATTGTTTTTCGGTTATGGTTAATACTCTTATATTGCCACAAGGAGGTAAAATTCTTTCTACGGATTTGATTGCTGTTTTAGCCGAAGTCATTCCTTTACAAATTTTAACATATACGCTAAATTGCATCATAAAAAAGCCAAGTTTTACAAGCGAAACTCTAAATTTAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //