Array 1 32108-32495 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHZI01000013.1 Acinetobacter baylyi DSM 14961 = CIP 107474 strain DSM 14961 Q336DRAFT_scaffold00011.11_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 32108 28 100.0 32 ............................ AACGCGCATAACCGTCAATCGCTTGCTCAATA 32168 28 100.0 32 ............................ TCACTAGTACAGATGTCGGTTCCGCATTAAGT 32228 28 96.4 32 .......A.................... TAATCCAGCAGATGGTACTGCACGTATCATGA 32288 28 100.0 32 ............................ GTGATTGTTAATTTCTGGGTCAGAATAGCGAT 32348 28 100.0 32 ............................ ATTCACCGTGACACGTGTACCCGCCGTTTCTG 32408 28 100.0 32 ............................ TCTTGCTTCTTGAAGCTTATAAATCGCATCCA 32468 28 89.3 0 ........................ACT. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.0 32 CTTAACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATAACTAAAAAATGATTTGAGAATGGTTTCACCGCTTAATTTTCCACTGGCAATTGGGGTAAGTACGCCAATCGTTAAAATAATCACACCAACATTTAGGCCATGTTGCTGTAAAAAAGGGAAAAATTCACTTAAAGGTGTAAGCTTAAAAACAATTAATACGCCTGCAGCAATAGTTACCGCCGCATTTTGGCTAAAAATACCACAAGCCAGTAAAACGAGTAGAACCAGTAAATTGACATCAAATTGAGACATGAGCATGGTATGAATAGTTAGTTTTGCAGGAATGATTATTGTATAACGATTTTACCAACACTTGAAAAAGAAAGACTTTTTACAGTAAATTGAATATCTATTATACTGGCTTACCCCAAAATTTTAGACTCTTTAAAAAATCAATTTAAATCAAATGCTTATATTTTGACTTAAAAACTTTGGTTAGAAGTGAATTTGTTGATTTAAGTTTTTGATATTTCGACTATTGCTCAACAATATTTACT # Right flank : ATTCAATCAATTGACTTAAAAAAATAAGTTACACTAGGATGTCTTTTTTATTCTGGATATCGATATGCTCTTGGAAAAAATGTTGCAGTCACAAGGTTTTGGTTCAAGAAAATACTGTCAGCAACTTATTAAGAACGGAGCAGTTTCGATACAAGATGAAATTCAAAAAGATCTAAAATATCGAATTCATGATTTAACTGATTTTAATTTTCAGGTTTTTGATCAAAATTACGTATATCGGGAAAAGGTATATATTATTTTAAATAAACCTAAAGGCTTTGAATGTTCTCATCAGCCACATCATCATCAAAGCGTATTCAGTTTACTGCCAGATTTATTAATTCAGCGCAATATTGCGGCTGTAGGGCGCTTGGATCAGGATACTACAGGGCTGTTGTTACTGACTGATGATGGACAATACCTACACACGCTAACGCATCCCAAGAAGCATGTTCCAAAGGTATATCATGTGGCTACGATTGATCCAATTACAGTTGATC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTAACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1175-6 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHZI01000016.1 Acinetobacter baylyi DSM 14961 = CIP 107474 strain DSM 14961 Q336DRAFT_scaffold00013.13_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1174 28 100.0 32 ............................ GACACCAAAGGTAATAAAGCTATGAAAGAATA 1114 28 100.0 32 ............................ TTTACTCTTATTATACTATTACCCCTAACCCC 1054 28 100.0 32 ............................ TCCAGCTAAAATCGTTTGAGGGTGAAACTCCT 994 28 100.0 32 ............................ ATGATTTCGAAAGGCTCTCCGAGTACGTTATT 934 28 100.0 32 ............................ ATTCCCAGCATTCACGCTGAGTGCTTCGGCAC 874 28 100.0 32 ............................ TGTGCAGCCGTTTGGCGCGCCCCAGATATGCG 814 28 100.0 32 ............................ AGGAACCGTGGCAGATTGCGTTAATATGTTAG 754 28 100.0 32 ............................ TAACGATGGAATAACGTTCAAAGAATCTAACG 694 28 100.0 32 ............................ AATTCATGAAAGATCATTCGCTGTGTTTGGGG 634 28 100.0 32 ............................ ATTTGCCGCTTTGAATATTTGATGCACCTGCT 574 28 100.0 32 ............................ AAATCGATGAGGGACAACATCAGGCACTCGAC 514 28 100.0 32 ............................ ACAGGGCAGGGAAATAACCAAAAATCGATATA 454 28 100.0 32 ............................ GACATAGGAACGATATGAAGATGATTTTTTTT 394 28 100.0 32 ............................ ATCAAGCTATCGTCATTTGGCCGATACACAGC 334 28 100.0 32 ............................ TCTGCCATGCATACAATTTGATTTGGCTGCGT 274 28 100.0 32 ............................ AATCATCAATATCTTTTTGCGCTTTGCGTGAA 214 28 100.0 32 ............................ TCTCACGTACAAAAAAAAATCCTATTTGATGT 154 28 100.0 32 ............................ GCGATTGAATACCGATAGATCGGGGATATTAA 94 28 100.0 33 ............................ ATACACTACATTGAACTGCTCGGACTTAAGCAT 33 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 20 28 100.0 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAGCACTGTATAAAGAATTGGCCAAAGGATTTAATATTGACTTTAAACGAGATGAAGGCAAAAACTCACATGATAGTCTTACCGATATTGCGAATAACTACTTAGATCATGGAAATTACATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGTATGGGAATTAGTTTTGCCCTACCTATCTTGCATGGTAAAACACGCCGCGGAGGTTTAGTGTTTGATCTTGCCGACTTAGTGAAAGATGCTTTTGTGATGCCAACTGCTTTTATATGCGCATCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAACTTATAGAAATATGCCAAGACCAAGATCTTCTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCAAACAATTAACTCAAGTGATTCATAACGAAGTATTTTTACTCATTAAAAGCTTATATAATTGATATCAAGGGTTTTGTTTTGACTTAACTCTA # Right flank : AAAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 296794-296406 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHZI01000005.1 Acinetobacter baylyi DSM 14961 = CIP 107474 strain DSM 14961 Q336DRAFT_scaffold00005.5_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 296793 28 100.0 32 ............................ AGCTGAACACGCCGTTTTTTAACTTCCGCCAT 296733 28 100.0 32 ............................ ATGCACCTGATCCTGCCCAATGAGGGATTTAC 296673 28 96.4 32 A........................... TGATGGTGCAGGAACCACAGCAACATCAGTCA 296613 28 100.0 32 ............................ GATTGAAATACTATTAAGGCTGTTCGTAAAGC 296553 28 100.0 32 ............................ ACACACGCTGCCAATTCTTCGTTAGAGTGTAT 296493 28 100.0 32 ............................ AGCAGTAAAAGCCATGACCGTTAAGATCGCTC 296433 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 99.5 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : | # Right flank : TATTAAAAGCAACATCGATAAGATCTAGCTGTCCAAACTATCAAAAGTTGATTCAAAACTAACTTTACTTCAAATTTTTTTACAGACTCTGATCTTGTACTAAACTATTCATATATGCCACCGCAGCAGTACGGTTTTCGACACAAAGCTTTTCAAAAATATGTTCTAAATGTTTATTCACCGTTCTTGGGCTTAATTCCAAAATCTCGGCAATGTCTTTATTGGTTTTACCCAGTGCAAGCCAATGCGATACTTCGGCTTCACGTTGAGTCAATTGCGGGCAGTATTTTAAAATATCTTCTATACTCAATGCTGTACTGGAAATTTTGATTTGCACCAGATAATTTTTGGTCGTGCTTAAATCATCTTGCCAAGGGGTCAAAAGAATTAACTGAAGTTGCTGTGTCGAGGTAGAGTAAGTACAGCTCATACGTTTTTTATTGTCTTTGTCTTTTTTAATGTCTGCAAACCATTGCTTTAAGCCCAACTTAAAGCCCGAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.80,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //