Array 1 17206-17055 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFFZM010000027.1 Streptomyces smyrnaeus strain DSM 42105 27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 17205 29 96.6 32 ........................A.... CGAGGCGAGACCAGGTGACCCGGCCCCACGGC 17144 29 100.0 32 ............................. CTGATCGCGGGCGGCACGACGGTCCAGGCCGG 17083 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 GTTCTCTCCGCCCGCGCGGAGGTGGTCCG # Left flank : CAAACGCGCCGTCGGAGACGCGGTCGACGGCCATCCGCGCTCCCGTGCCTTCCTCCTCGATCGTCCGGCAGGTCGCGATGAAGCGCTGGGCGCGGGCCGGTTCGGTCCACGGCGGGGAGTCCCAGTAACGCAGCACGTGAGTGCTGCTGTGCAGCGCGTAGAGCGGCGCCGCGTCGGCGTCGGTGAACGGCCGCAGTCGCAGACGGGCGGTGTGTAGCTCGGGGGTGGGCAAGGTCATGGGGAGCATCCTGCCGCGTCACGCTCGCCCTCGACCATCCGTTTATCTGGACGGTTGGGGGCGCCTACGTCCGCGGTGACGCCTGACGCTCCGGCGGGGCGGTGAGTCCGCAGTACCGTGCCGACCATCGCACCCAGCAGCAACCTCTCCGTGCCGGCGCTGCTGTCGAAGCCCGTGAACATTTCGATTCCCTCTCGGGTGGCGGCTGCCTCCCAAACCGGTGTACATCCGCTGCCGGTTCTCGTGGACAGAACCACACCTC # Right flank : TCGGCGTACCGAGAAAAGTGCTCAGGCGTGTACAGACGAACGGGCTCTGTCGCTGATCTGGTGACGCGGGTATGGGCTGATCGTTTTGCTCAGGTGTGCAGTTCAGATGGGTCGGCGAGAACTGCAGCGACGTCGTCGTCATTCAGGTTGCTGCCTGGGGGTAGGGCGGCAGCCCCTGTCACCGACCGAACGTCGGCGGGGTGCACAGCCCGTATCGCTCGTGCGGGGAGGGCTACAGGCGATCGGCACATCAGCGGTGGTGTGTTCTCGGTGATGGCATTGCGGGCATCTCTTCGCCCCACGCCCGATGACCCTGGTTTCGGTAGTCCGGCGCTCGGTCCGGTGTCGGCGGCGGTTCGTCTGTGGTCCTGGTCGCCTTGACCGAGGGCTGGCCGGTCTGGGTTCGGTGCCGGTAGGCCCCTTCTTCAGCGGCGAGGGGCTGCGTCAGCACAGTCGCGCAAGGCCGAAGGCTGATCGGACTTCCGTGCGAAGTGAGGGTT # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCTCCGCCCGCGCGGAGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCTCCGCGCGAGCGGAGGTGGTCCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.10,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.5 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 2 22026-19741 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFFZM010000027.1 Streptomyces smyrnaeus strain DSM 42105 27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 22025 29 100.0 32 ............................. GCCGCGACTTCTCCGACGACGAACGCGCCCAG 21964 29 100.0 32 ............................. GTACGGCTCGTCGGCCGCTCCACCCCGAACGC 21903 29 100.0 32 ............................. ACCACGTACAGCGTGGACGAGCCGCTGAACAC 21842 29 100.0 32 ............................. CCCGCGAATCGGCATATGCCAACACCCAGACC 21781 29 100.0 32 ............................. TACATCGCTAGCCAGGGCCGGTACGAGGAAGG 21720 29 100.0 32 ............................. TTCACGCACCCGCAGCTGCACGCGCAGGTTCG 21659 29 100.0 32 ............................. GTCGTCGCGCTGCGCGCGGATCTCGAAGAACT 21598 29 100.0 32 ............................. TGGATCGAGGCCCGGCAGTGGGACCACCGCGC 21537 29 100.0 32 ............................. CCCGGTTCGGTCAGGCGCTGCTGGATGCTGTG 21476 29 100.0 32 ............................. CTGCAAACGCCGGATTCGGCTGTCTCGCCTTC 21415 29 100.0 32 ............................. TGTGACAGCGGCTGTGACAGCGGGCTGTGACT 21354 29 100.0 32 ............................. CGCGCGGACGACCTGGCCCGGTACCACGCGGA 21293 29 100.0 32 ............................. AGATCCAGGCATGGGGCTACGGTCCATCCGTA 21232 29 100.0 32 ............................. GGATCCACCATGAGCGTACCCACTCAGCACCA 21171 29 100.0 32 ............................. ACCGTGCCCGACGGGCGACCCTCTCCTCCTGG 21110 29 100.0 32 ............................. CAGGTGCTGCACGGCGGGGCCATCGTCCTGGA 21049 29 100.0 32 ............................. CCGTACGAGACCACAACGCCCAGTACCGGCCA 20988 29 100.0 32 ............................. CGGAAGAGGAGCTGTTCGACACCGACCCGAAC 20927 29 100.0 32 ............................. CGCACCATCACCTGCGCCTGCTCCGTCGTGAA 20866 29 100.0 32 ............................. CATGTGACCGCCGAGTCCGTCACCATCCGAGA 20805 29 100.0 32 ............................. CTCGAATTCCAGCGCAGGGGCGCCCCGCACAT 20744 29 96.6 32 ............................A GGCCCGCGCCCGCTGCTGACGATCGCGCCGGG 20683 29 100.0 32 ............................. CGGCGACCACATAGGTCAGCCCGGCCTCCTCC 20622 29 100.0 32 ............................. CGACCCGAGAACGTCTCCCACCGCTCGCCGAA 20561 29 100.0 32 ............................. CAGATCCGCTGCCGCATCCCCATCCCCGCGTA 20500 29 93.1 32 .C..........................T ACTCCATGACGTCCGGGATCGCGTGCTCCACG 20439 29 100.0 32 ............................. CATCCGTTCGAGAAACGCGGATCTCTGGTTCA 20378 29 100.0 32 ............................. GAAGCGCCTTGCTGCGTCGCGGTGAGGACGTG 20317 29 96.6 32 ............................T CCACCGGGACAGACGAGCAATGTACGAAGAGG 20256 29 100.0 32 ............................. CTGGGTCGGCTTTTGTTGACCTTGGTTGTTGG 20195 29 100.0 32 ............................. CAGCTGGTCAGCTCCGGCGCGGTGCGCCGTGG 20134 29 100.0 32 ............................. TTGTAGGGCAACCCGGGCTGGGCACTGGCGGT 20073 29 100.0 32 ............................. GACACCGTGTCCACCCCCACGACCACGGAGAA 20012 29 96.6 32 .........................G... ACCTCACGGCGGCACTGGAGCGTGCCCGCGAG 19951 29 100.0 32 ............................. AACCCGCATCGAGCACGGACCACGCCCAGGCC 19890 27 86.2 32 ...G........T-.-............. TACGGGAACGCGGTCACGCCGCCCGTGGCCGA 19831 29 86.2 32 ...G.........AT........C..... CATCGCCCGCAGTCTGGCGGCGTCCCCGCGAC G [19821] 19769 29 82.8 0 ...G......G..A....TA......... | ========== ====== ====== ====== ============================= ================================ ================== 38 29 98.4 32 GTGTTCCCCGCGCGAGCGGGGGTGTTCCG # Left flank : GCACGGGCTGCGGTGCCAGCTTGCGAAACTCGCGCTCTTGCTTCTGGCAATCGCGTTGCTCGATGTCGATCACTTGGAATTTGCAGTCGTCGCATAGGTGCGGGGTGGGCGGCCCAACCGTAGGAGCACTTGGCCACGGGACCAGCGCTCAGTCGCCCGATCTGCGCTGCCCGGGACAGGGAGGCCCCGCCTCGGTCGCGCCCCCAGCCCCCTGCAGAGACCGAGACACGCTTGCCAGCCATACCCCGGCCCCCGGCTCGGCGAAGGAACGGCCGCACCCATCGGCATGCTGCCCGCGCGGTCCTTAAGCGACGAGCCACCGCGTCGACCTGCGAACCCTCACGGGCACCTTGCCTCGAGACGTGCTCCAAAATGACACCCGCCCGAACAAGCCTATGGACACCCAAACTGCGGTACCGCTCTGCCACCATGTACCAATGACGAGAAGCCGCAGCAGTAAAGAACCGGCAAAGCCACGCTAACGGAGCAGGTCAGGAAGT # Right flank : ACCGCCTGTCAGTGCCGGGTGGAATGCTGGCAGCATCCGTATGCATCCAGCTGGCTGCTGTAGGCGGACGGCCCCGTCCAGTGTTGCCGGCGGGGCCACGCCGACGTTGGCTCAGGTTCGCACAGAGGACAGCCAGCACGGGTGAAGTCGAGCATTTCGACCCATCTGCGCTGGTTCGGCGGCGAAGATGGCGGCATGAGTGACTGGACGGTGATCGGCCTCATCGATGAGGACGCCAAGATTCTGCACGTGACCGCAGTCTTCCCCGGTGATGTCACCCCCGATACCGAGACCGCACAAACTGATGGCTTCCGGCCCGTCGCTCGCGCCGCGTCCGCAGCGACGAGCGCAGAGGCCGCCTCCCGCGTGCGAGATGAGGTCGAGGGTGCCGAGCCGATGCCTGCTGGCGGGGGCTGCTACTCCTGCCGTAACCGCCAGCACGACGAACTGCGCTTCCGTGACGCGTTCGGCCACGACAAGCACGGGCACCGGCTGTCGAA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 41502-39586 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFFZM010000027.1 Streptomyces smyrnaeus strain DSM 42105 27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 41501 29 100.0 32 ............................. CACGACGCCCCCGGACGGGAGGCGCTGCTGGA 41440 29 100.0 32 ............................. CTGAGGGTGTTGCCGGGGATGCGCAGCGGCAG 41379 29 100.0 32 ............................. GAGGAGAACTGGGAGGCAATCGACGCTGCCGT 41318 29 100.0 32 ............................. TCCGCCTTCGACGCGGTCACCGAACTGCAGAA 41257 29 100.0 32 ............................. CTGCTTGGTGATCTCCACGATCAGGTCACCAC 41196 29 100.0 32 ............................. ACCGCGGTCGCCCCGGCCGTCAGTCAGATTGC 41135 29 100.0 32 ............................. GAAGCGGCCGAGCATCAAGAGCAGATCACCCA 41074 29 100.0 32 ............................. CCCGAGGACATGTCGCACGCGATGCTGATCGC 41013 29 100.0 32 ............................. ATGGCGGCCCGGCGGCTGGCGTCAGCCGCCGA 40952 29 100.0 32 ............................. GAAACGAGCCGACCGCGGCCGAAGTCGGCGAG 40891 29 100.0 32 ............................. GGGGCGGGAATCCCCGACCGGCACCACACCGA 40830 29 96.6 32 ............................T GATGGGAACTCGCTTGAGTGAAATACGCCTGT 40769 29 100.0 32 ............................. GCCGTCGCCCTCGCCCGCGACATCCGCGACCG 40708 29 100.0 32 ............................. GCCCGCGAACACCGCGCGAAGGGTCCGCAGTA 40647 29 100.0 32 ............................. GACTGGTCTCTCGCCCGCTTCGAGCGGCATCT 40586 29 100.0 32 ............................. GACGGTCCGCAGATCCCCCTGGAGCCGGTCCG 40525 29 100.0 32 ............................. GTCCTGGCCGGTGGCCGGTTGCGCGTCGACGT 40464 29 100.0 32 ............................. TTGCCCTATCGTAAATCCAGCAGGAAGCGACA 40403 29 100.0 32 ............................. CGGATGCCGTACCTGCAGAACGTGCTGGAGGA 40342 29 100.0 32 ............................. GTCGTGCTGCGGCACATGCGGCACGGGGAGGA 40281 29 100.0 32 ............................. TCGCGGCGCAGCGCGGCCCCGACGAGGCCGGC 40220 29 100.0 32 ............................. AGGAGGTCCCGCCGTATCTGGTGGGATCCAGC 40159 29 96.6 32 ................T............ TCCTGCACCACGTCTAAGCCGGGCTGGTCCGG 40098 29 100.0 32 ............................. CCGGATTCGTCCGATGCGCCGGCGCATCGGAC 40037 29 100.0 32 ............................. GTCAGCCGGTTGGAGACGGGGCAGGGGATCGC 39976 29 89.7 32 ..TG........................T GACGGGGGCAGCGGGGTCCCGGGGGCGGCGAA 39915 29 93.1 32 ..TG......................... CGGCATCTCGACAAGTACGAGGAAGACAGGGA 39854 29 96.6 32 ...G......................... GTGGCGACTCTGATCGCGGCCACGGGGCTGGT 39793 29 93.1 32 ...G.........G............... GCCACCAGGGCGATTCCAGCGTCCTGGTGGCC 39732 29 93.1 32 ...G.........G............... TGGCGTGCGAACAGATCGGGGCCCGTGGTCAC 39671 29 89.7 27 ...G.........G....C.......... GCCGCCGCGCGCAAGGCACTGAAGGAC 39615 29 86.2 0 ..TG.........G..G............ | G [39593] ========== ====== ====== ====== ============================= ================================ ================== 32 29 98.0 32 GTGCTCCCCGCGCCAGCGGGGGTGGTCCG # Left flank : CAGTTGCGGCAGCGCCGCGTGGGTGGCGCTCTCATGACGTATCCGGCCGACTGTGGAGTCAGCCCACCGGTCGTGCGCGTACGCTGCCTCACTGAGGAACCCGGAATGAGCCGGCCTCGCCTTGAGGAGCATGCCCTGGAAAGACGGGATGATCTTTCCGAGATCGTGCAGTCCCGCCCAGAACATGACGATCCGCCTGGCCTCAGAGACACCCACACCCAACGCCTCCACGACCCGGCTGCGCTGCCCCTCGGCCAGCACGCGATCCCACACACTGCCGCACACCACCGCGGAGTCAACGAGATGCCCCACCACGGGATACGGCGTCGCCAGCCCGTCGGACTTCCCACACAACCGCGTATCAACCACGCCGCGCCTCCCCACCGCGTTCCATCAGAGGCAAAAACTCCATCACATGCCTCTGACAGCATGAGGGCGTGACCCCGACAGACCATGGTCAAGCAACAGCAAAGCCGCTATAGAGCTGCAGGCCAGGAAGA # Right flank : TTCGCGGTGCCCAGGGTCACCTCGCATCAGGGCGGCCACGCGCCGGCATCCCATTCCCCCGCCACGGGCGCCAGCAAACGCGGAACCGGCGGGGAACCGGGGACGAGCCACCGGTGACGCCTACAGCCCTCAGCAGAGCCGCCCGCCCGGGTCCGGAAGACGAGCCCGAACTCACCAACAGTGTTCTCAGGGTTAGATGAGCGCGCCGAGGACGCCGCCGGGCGGAACGAGTCGGGCGACGGCCGCCAGGCCCCGGCCGGCTGCTGAACGCTGCTGAAGAACGCGGTGCGCGTACTCGCGGCGGACCTTCGGGGGGCGGCAGCGAGTCAGGAGCTGCGGTGGATCGCTGGGGCACTTCCCGTCATTCCTCGAGTGCGGAAAGGCCGGCCAGGCCCGAGTCGAGCATGATGCGGTCGACGGTCTCGGGCAGGCTGCTGCCAGCGTCGAAGACGGTCTCGATGCCGCCGGGAAGAAGATCACGCGGCCGGTACCAGTCGCGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCAGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGGTGGTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 53371-51766 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFFZM010000027.1 Streptomyces smyrnaeus strain DSM 42105 27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================================================================== ================== 53370 29 100.0 32 ............................. GTACGGCTCGTCGGCCGCTCCACCCCGAACGC 53309 29 100.0 32 ............................. AGACTCAGCCCGTACGTGAGGACGCCGAGCAC 53248 29 100.0 32 ............................. GTCCAGCGCGCCCGCAGCGAGCAGCTGCTCGA 53187 29 100.0 32 ............................. CCCTCTCAGCTCGGACGGGTGAGGGCCACCGC 53126 29 100.0 32 ............................. ACGAAGAACAGGCCGCCGGGGACCGGGTGCGG 53065 29 100.0 32 ............................. GCAAGCTCGGTGATCTTGCCGACCACAGCGTG 53004 29 100.0 32 ............................. TCTGTGGCCGGGTCGGTCTCCAGGGGCCTGTC 52943 29 100.0 32 ............................. GCCCTGGCCCGGTACGGGATCGACCTGCTGCC 52882 29 100.0 32 ............................. GTGTTCCGGGAGGGGCAGGCGTGGGAGGACGC 52821 29 100.0 32 ............................. ACGTGGTGCGCGCGCGGCAGCGCAGCGCCCGC 52760 29 100.0 32 ............................. GTGGTCTTCCCTTTCGGCTGCTGGCTGGGGGT 52699 29 100.0 32 ............................. TGCGCCAACGCCAGTTCCAATCGGGTCGATGT 52638 29 100.0 32 ............................. CCGCCGGATGTGAGGTCCACCTGGTGGGGAGA 52577 29 100.0 32 ............................. AACCCCAGCGCCGCCCGCAGTACAACGCCGAA 52516 29 96.6 32 ...............A............. CAACTCGGCAACGTCCCGCAGCGGCTGGGAGG 52455 29 93.1 32 ..T..........G............... ATCCTCGACGAGGCCAAGACCGACCCGGACAC 52394 29 93.1 32 ..T..........G............... ATCAGTTCCTCCGGGCGCATCTCCGCCAGCTG 52333 29 93.1 32 ..T..........G............... CGGGAGGCCGACCGTGCCGAGCAGGCCGAGGC 52272 29 93.1 32 ..T..........G............... ACCTGCCACAGGTCGACTCGATCCCCGCCCGG 52211 29 93.1 32 ..T..........G............... GCCGCGCAGGACGCCGCCACCACCGCCACAGC 52150 29 75.9 32 ...G..C....G.GA....G....T.... ATGTTGCGGTCATTCACGCGGATCAGAGCGGT 52089 29 75.9 32 ...G..C....G.GA....G....T.... CCCGACGTCCCCCGCGTCGGGCTTCACCCTGC 52028 29 75.9 32 ...G..C....G.GA....G....T.... CTGGTGCGCATCTCCCTGCAGCTGCTGCAGGA 51967 29 75.9 32 ...G..C....G.GA....G....T.... CCAACCAGCTCGACCTCGAAGCCCCCGACCTG 51906 28 75.9 84 ...G..C....G.GA....-....T.... ACCCACAACGTGGGCCTGTACTGCAACGTCGAGTAGTCCCCGCGAGAGCGGGCGTGATCTCCCTTGAGACGGTGGCGCCGGCAG 51794 29 69.0 0 T..A..C..A.G..G....G..C...T.. | ========== ====== ====== ====== ============================= ==================================================================================== ================== 26 29 92.7 34 GTGCTCTCCGCCCACGCGGAGGTGGTCCG # Left flank : CGCATGCCCCACCCGCTCGACATCCCCCGCATCCCCCCGCAGCGCACGACTCACCGTCCTATACGCCCCCGGGGCACACTGCTGAAAACCAGGCGTCAGCTTCCCCAAGTCATGCAACCCAGCCCAAAAAGCCACCAGCCCCCGAGCCACCCCCTGCGGAACACCCAGCCCCCGGGCAATCCACACCCGCTGATTCGAAGACAGGAAGCGATCCCACAGCCCACCAGCAATCGCCGCGCTGTCCAGCAGATGGAACAACAGCGGATACACCACACCACGGCGCTCCAACGCCTTCCCCCACGGCGACCGATCCCCCCGGCCAACACACCCCGACACACGCCCTCCCCCTATACCGTCAACTCCCTACCGGTACCTAAACAGGACCCACTGACAACGAAGGCGCAGATGACTATGCCGACGGCTTGCCCTTCCTCCCGACAGCCGACCAACCCAACAGTCAACAACTGGCAAAGCCCTCAGTAGACCGCAGGTCAGGAAGT # Right flank : GACCGGCGACGGGGGGGTGGAGTAAAGCATTGTCCGCAAGGGTCAGAGGCGTGGCGGCGGCCTACAGCTGGGTATAGGCGTTCGATTGTGGAGTGATGCCCGTGAACGCGGGGTCTTCTGCAGGTTTTCGGTCGAGGAGGGTCAGAATGGCGGGTCGGCTGTTCCCAGGAGTTCCTCGGGGCGGAAGGCGACAAGGGTGAGGCCGTCGAAGTCGACAGGTGTGCGGCGGCGTTCGCCTGCGGTGTGGAGGGTGTAGCCCTGTTCGTTCGCGTCTGGATGGACGAGGACTGCGGCGCCGCTGCCAACGGAGGCGCTGACCACGCGCCAGAGTTCGTCGCGGACGCGGGCGGAGAGGGTGCCGACGTAGAGGCCTGGTGCCGGTTCGGTCATCCAGCGGGTAAGTGCGCCGCGAACGTGGTCGGGGATGGCTGTGGTGGACAGAACGGTCATGGACGGCACAGGTGATCACCGATCTTCTTGGGCGCGGCGGTGCACGTGTC # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:-0.14, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCCCACGCGGAGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCTCCGCGCAGGCGGAGGTGGTCCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.10,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //