Array 1 1835361-1837157 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021106.3 Nitrosospira lacus strain APG3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1835361 28 100.0 33 ............................ CCTGCGCAATCCCGCGGTAATTGACGCGGCGGG 1835422 28 100.0 33 ............................ CGTTAGTTCTCACACTGCAAGACGCCGCTAGTA 1835483 28 100.0 33 ............................ GTATTCGTTGACCGCTGACCTCAAAGCCTTCTC 1835544 28 100.0 33 ............................ CATGACGCTAACGGGTAAGACAATCAATGCGGA 1835605 28 100.0 33 ............................ CATGTGCCCAGTGTCCACCAAGGCTTTTGAGAA 1835666 28 100.0 33 ............................ GTAGGGGCAATGGAGAGTAACGCATCTCTAACC 1835727 28 100.0 33 ............................ CAGTCGTCAGAATGGGTTGCGTTGGGATGGCTG 1835788 28 100.0 33 ............................ CATATAAGAGCTGCCCTTTGAGGCGGCTTTTTT 1835849 28 100.0 33 ............................ TTCAAATGGCAGGCGTGAAAGGTAAGAGTGGCG 1835910 28 100.0 33 ............................ CTGAGGTAGGCGAGTTATTCACGACTTGGCAGA 1835971 28 100.0 33 ............................ CTTCAGACAGAGGCCGCGAGAATTGACCTTGCC 1836032 28 100.0 33 ............................ CACTAAAGGCGCTGGCGGCCGACAGCAATACGG 1836093 28 100.0 33 ............................ CCCAGCTAATACAAAGGATCAGCCAACCGCTAG 1836154 28 100.0 33 ............................ ACCAATCCGCCAGCTATCGTTGTGCCTGGATAC 1836215 28 100.0 33 ............................ CCACTCCGGGAATGTGTTGGGGATATTCACAGC 1836276 28 100.0 33 ............................ CCACCCGATAGGCTCTAGCCATTCCCTAATGCT 1836337 28 100.0 33 ............................ CTCGACCGCCAGCGCGAACATATCTCCTGGGTG 1836398 28 100.0 33 ............................ TCACCCGGGTGAGTAGGATGAAGCCAGTACGCT 1836459 28 100.0 33 ............................ TTAGAAGGCGGCCGGTACAGGGAGTTGAAGTTA 1836520 28 100.0 33 ............................ CACGCACAACGTCATCGAGCGATTCCACAATGA 1836581 28 100.0 33 ............................ CGTCAGGCGGGAGTCCGGCAGGGGCGGCGGAGA 1836642 28 100.0 33 ............................ CTCTGTGGTAATGTCTCCGAACAGAACGACATC 1836703 28 100.0 33 ............................ CTGGTTCGTCTTGGTCAGGTTAACCGATGTCGT 1836764 28 100.0 33 ............................ CCGTTACGACTACTGGGGCAAATAGCCATATCA 1836825 28 100.0 33 ............................ CCGGCAGGATACGCATCGGCTGTTGACGGGGAT 1836886 28 100.0 33 ............................ CAAGCTTAATCCACACTGCGAAACGCATCACCT 1836947 28 100.0 33 ............................ GCGATGCGGGTGTCGGGCGCGGCTCCGTCCATG 1837008 28 100.0 33 ............................ CGTATCGAATGGGGCGGTGATAGTTCCTAAAGA 1837069 28 100.0 33 ............................ CGCAGAAGGCATTATGGCATTGCTAATGCCGAA 1837130 28 92.9 0 ........................T..T | ========== ====== ====== ====== ============================ ================================= ================== 30 28 99.8 33 GTTTCCCCCGCGCCTGCGGGGATAGGCC # Left flank : AAAAAGATCAGCGAAGGCGACGAAACAATAATTGATCGATTGGTAAGGCGTGAAGCATCCACCATATTCAGAAAACAGGGGGTGATCCCCGCCATGATAGACAAAATCAAGCAGGTATTGCGTACTGAGGAAACAAATGGCTCTGGTAGTGATAGTAACGCGTGATGTCGCCTACAAATATCGCGGATTTCTTTCTTCAATAATGCTGGAGATTGCACCTACGGTCTATCTTTCTCCCCACTTGAATGCCGGAATAAGAGCGAGAGCTTGGGATATTCTTGCCGATTGGTATAAGGCTGAGCCACAGGGCAGTATTGTTATGGTGTGGAAAGATGTAAATGAAATCGGCGGTGTTGGCATAAAAAACCTGGGCAACCCTCCAAGTGAACTGGTAGAACTTGATGGTCTTTGGGTAGTAAAGCACATGATGTAATTCGATCTTTAACAAATCGCATGCTTTTGAATGATTGCTCTTGCAGATCAAGAAATTGTCTATGAGA # Right flank : TGTCGAAGTACTCTCGAGTACTCTATTTCCCCCGCCTACCAAATGGGGTTATGTCAATTTTATTTCGCTAACGGTGTAAAGCAGCGTTGTCGACTCTGCCAGATTATGCTTTGCGAATCTAGTTTGGGGCAATACGGACAAATGCGGATCCAGTTAAATTTTGGGGATGCGCAGCGTTTTACTGATCATCAGGCTTCCGGACAATACGAACAGTAGAGCCAGGGGATGCAATTCCCACGGCCCAATTGTCCACACTCCCCAGTAAAGATTCTCGCCAAGCCGTCCCATCCAGGCGGACAGCGCCAGCACGGCGGTGAGAACAATACTGGTGGGAATCGGCGTGCCCTCGAAGTAGGCCACCTTGTCGGCTCCCGCCGAGAGACTTTCCGCCGTGACATTGAATCGGGCCAGCCGGCTTACCCCGCAGCATACAAAGTAAATCAGCGCCACCCAATCCCAGCCGCCGCGCAGTCCGGCGGCGAAACCGAGAGCTGCGGGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCCCCGCGCCTGCGGGGATAGGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //