Array 1 2948-886 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGXFA010000198.1 Cytobacillus oceanisediminis strain 1T3 NODE_198_length_3096_cov_30.503873, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 2947 29 100.0 37 ............................. GAAGCGAATTACAGTATGCATTTTTAGGATCATTCAA 2881 29 100.0 38 ............................. TATTATGATGAAAGTTCAAAGAATGTACATCTATACAA 2814 29 100.0 38 ............................. GTATAAATTGCCTAAAGAACCACCAAAGCATCCAACAA 2747 29 100.0 39 ............................. TGAAGGTCGTGAAGACATGGGTATTCATCTTGATATTTC 2679 29 100.0 36 ............................. AAGTGATGCCAGAAGAAGTTTTGTTACCAGATATAC 2614 29 100.0 36 ............................. ACCTACTACAAGTTCTTTTGATATTGTTGATCCTAG 2549 29 100.0 35 ............................. ATACTAATCAATCAGATATGAAAAATGTTAAAGTA 2485 29 100.0 36 ............................. TGAGTTAATTCAATGACACTAGAAGAATTTAAATCA 2420 29 100.0 36 ............................. GAACTGGTATTCCATGATAAAGGGTTTTTATGATAA 2355 29 100.0 36 ............................. TATCTACCTACAAATATACAAACGTACTTTACAAAC 2290 29 100.0 36 ............................. CACAAAAGGCGTAACGATTCATTCGCCATATCCAAA 2225 29 100.0 39 ............................. ACTCAACTAGATTCGCAATTGTTACGCCAAAATCCGCTG 2157 29 100.0 37 ............................. ACGTGAAATCACGGACATCGGCATAAAGGATATTCGT 2091 29 100.0 35 ............................. CCACCGAGCACTTTTTTATACGTTTCTTTTTCCGC 2027 29 100.0 38 ............................. CGCGAAGGCCGTGCGCTTGGCTCGACGTTGTTTTAACG 1960 29 100.0 38 ............................. TTTCTTTGCGTTATTAATCGAAAGGCACAACGAAACAG 1893 29 100.0 37 ............................. CTAGTGCAACGGGGAGAGCTGAACGCAGTGGACTGTA 1827 29 100.0 36 ............................. GTTAAGAGATAAGTTTAAAACACTTGGTTATACATA 1762 29 100.0 35 ............................. TTAGAATCAGAAAGATTTAAAGTAGAGTTTACTCA 1698 29 100.0 37 ............................. AAAGACATAAGAAGTATATTGAGGATATGTTAGAATC 1632 29 100.0 36 ............................. AAACATTGGAAACTTGGTACAGTAGCGTTCACACGA 1567 29 100.0 35 ............................. CCAAAAGGCAAATACTATGTCTTTAATGAATCCCA 1503 29 100.0 36 ............................. TAGAGCTTGTTTGTACTTCTTTTGACGTTGTCTTAG 1438 29 100.0 37 ............................. TTTTTTAAGTCAACAGTTTTTTCTTCAGCTTTCAAAA 1372 29 100.0 36 ............................. CTCGAATAGGCTTTAAGCCTTTATCATTCATTTCAT 1307 29 100.0 35 ............................. AATAAAACTATAAATCATAAAGGTGGAATTATTAA 1243 29 100.0 36 ............................. AATAATTCTGATGTTCGTTGCACTATGTGGAATGGT 1178 29 100.0 38 ............................. GGTGAGGGTGCTATAGTTAAAGTTGTAGCTGGTTCTGC 1111 29 100.0 36 ............................. CGGAGAGAAGGCACGAACATTAACGCAATATCTACA 1046 29 100.0 36 ............................. AACTATTTTAGGTTCTGATTATTTACTTCAATTCTT 981 29 100.0 38 ............................. GGTGAGGGTGCTATAGTTAAAGTTGTAGCTGGTTCTGC 914 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 32 29 100.0 37 ATTTATATCCCACTACGTTCAGATAAAAG # Left flank : GGTTTTTAAAAAATGAGAGAATCAACAGTTGGAAGAACAAAACCAATTGGAAAGCGGATACAAACTTAGAGGTTTTACTTTATAAAAAAGGGAGCTAAAAAAACTCCCACAAAAACTTGACTCAATCCAGCATTAGGCATAGCAAATC # Right flank : CGGAGAGAAGGCACGAACATTAACGCAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTACAATTTATATCCCACTACGTTCAGATAAAAGAACTATTTTAGGTTCTGATTATTTACTTCAATTCTTATTTATATCCCACTACGTTCAGATAAAAGTGCATTAGCTGCTCTGCCTCTTCTTCGGTTAATCCGATTTATATCCCACTACGTTCAGATAAAAGCATAATTGTTGTTTATGACGCTTGAGGCATTGACTGATTTATATCCCACTACGTTCAGATAAAAGCGTTGGATCAACTGGCGGTGGAGTCGGTTCTCCTGGATTTATATCCCACTACGTTCAGATAAAAGGAAAAACCACCAAAGCATCCAAGCTAAAATAATTAAATTTATATCCCACTACGTTCAGATAAAAGGCTCTGATCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATATCCCACTACGTTCAGATAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 1754-154 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGXFA010000222.1 Cytobacillus oceanisediminis strain 1T3 NODE_222_length_1919_cov_28.617188, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1753 29 100.0 36 ............................. TACTTGGATGCCTTATATTCGTGGTTTCATAATAAT 1688 29 100.0 37 ............................. AAAAAATTGATGTTGGAATTGACAAACGTTCTACTAA 1622 29 100.0 35 ............................. GTTGTAATGATTTTAGGATATGCAATCGCAATACC 1558 29 100.0 35 ............................. TTAGAGATGGCAGCCAAAAGTGACGTTTTAAAATC 1494 29 100.0 38 ............................. GGTCGTGGTGATTATACCATTGCTCCAATTGTTCCTGA 1427 29 100.0 39 ............................. TTGATTAGCTAAAAGTAAGATTTCTTCATCTCTCATTTT 1359 29 100.0 36 ............................. AAAAGGTAATAATAGTTATATAGATTATGATAAACT 1294 29 100.0 36 ............................. TACTTTTACAAGTGATGGAATACATCCTAATACTTT 1229 29 100.0 38 ............................. AAAGATAGTTGGACTTATGCTAGTTTACAAGCTTCTAC 1162 29 100.0 36 ............................. TCAAAAACATGATTAGAAGAAATAGTTTTTAATTCA 1097 29 100.0 36 ............................. GGGAAGTTCTAATGGCAGAAGCAAGAAGTATCGCTC 1032 29 100.0 36 ............................. ACATCATCCGCACTTCAATGAAGTGAAGCTTATTTC 967 29 100.0 38 ............................. TGAAATGCATTGGGAATCCTTCTTCCTTTTTTCATCCC 900 29 100.0 38 ............................. GGATCTGCAGAACGACCTTCTGGGTTATCTTCTTCATC 833 29 100.0 37 ............................. AATATAGTTTAGAGATTGAGTAATTCTATCTCCGTCA 767 29 100.0 37 ............................. AGAATTTTTAAACCTAAATTCGATAGATCTATCAGTA 701 29 100.0 36 ............................. CGTATTAGCATTCGGTAAGAAACGATCTCCTAACGT 636 29 100.0 36 ............................. GCGTCTTCTTGTCGCTGGCTTTTTCGGTTCTTCCTC 571 29 100.0 36 ............................. AAAACATTCCATCAGTATTTAATGAAAGCTGTAATC 506 29 100.0 36 ............................. ATTCCCCTCAGCATCTTGCCTAGCATCCGTTATTTC 441 29 100.0 36 ............................. TGATTGGGTTGGTGAGGAACATAATCCATTTACCAG 376 29 100.0 36 ............................. TAGAATTATTCTCATATGCTTCTATATTTGTCCCCA 311 29 100.0 36 ............................. CAAACGGTCAAACATACGACACATTACCGAAAAGGC 246 29 100.0 35 ............................. AATCCAACGACATGGTTAATGAATGTATTTACTCC 182 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 25 29 100.0 36 ATTTATATCCCACTACGTTCAGATAAAAG # Left flank : ACGGAAGAAGGATTAAACTAATCCATCTTAAACAGGGCGTTAGATGATTCAAAAATTAAGGAAACCCAATTTATTAGGGTCTCCTTAATTTTTATCCAATAATCAACATTAAAGATTAACAGAGCCAAAGTAATAAAAATTTTCTTGTTTATACAAGACATTCTG # Right flank : GATAAGAGTCTTTAATGGACGCAATATCGGATTAACCCCCGAATTTTGGACAATAACTCTCTTATTCTTTCATTTCCTCAGTTTTTTATTTTATAGATTTCTTTCATTATTCTTCAAAAAGGCCATGTTGCTTGACATGGAGCCTCTGCGGGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATATCCCACTACGTTCAGATAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 4556-2894 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGXFA010000109.1 Cytobacillus oceanisediminis strain 1T3 NODE_109_length_15350_cov_26.129081, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 4555 29 100.0 37 ............................. AATTTAAAGAAGTTAAACCAAGTTAGAGTGATTGCTA 4489 29 100.0 36 ............................. CTCTTTATAAGATGGGGATAAATAAGTAACGACTGC 4424 29 100.0 37 ............................. TGAAGTAGATCGCACTCAATCCATGTCTGAAAACAAG 4358 29 100.0 37 ............................. TCATCTTCAGCACCCCCCTTCAATAAATCAATATTAG 4292 29 100.0 37 ............................. AAAGAAACGATAGAGCAAAAAACATATAATTGCTAAG 4226 29 100.0 36 ............................. ATGCGAAATATCTACGATTTTTTTCGTCATTATTCT 4161 29 100.0 35 ............................. CAGAAATCAAATCAATTTACATTACAATCAAAACA 4097 29 100.0 37 ............................. ATTAAAGAAGAAAGCAGACGGAGGGCTAGGAGGAAAG 4031 29 93.1 37 ............TA............... TTGGCTTGGCGTTCGAGTTGCCGGCTGGCTATGAATT 3965 29 100.0 36 ............................. AATACTCAACCATTGCAACTGTTTTTCCATAACCCT 3900 29 100.0 35 ............................. TATAAGATTCGGGCATATAGCAATCTATTTTTCTT 3836 29 100.0 36 ............................. AAGAAATAATGATTGTTAGCGCTGCAGTAAGCAAGG 3771 29 100.0 36 ............................. GAAGAAATCGAACGTGTAGCAGAGTGGGAAAGAATT 3706 29 100.0 38 ............................. TTGACTTGGGAAATGGATATGCTAAACGGAAATTTAAT 3639 29 100.0 38 ............................. TTGACTTGGGAAATGGATATGCTAAACGGAAATTTAAT 3572 29 100.0 37 ............................. TTGTAGCTAGTTGCTTAACCGGGAGACGTTTATAATA 3506 29 100.0 35 ............................. GTTGTAACAAATTCAATTAGTTTATCGATTTTAAA 3442 29 100.0 36 ............................. TGCTTATAGTTTAGTAATTAATGAAAATATCTTCAT 3377 29 100.0 36 ............................. TATTCCAACGCTTTAATGCTTTTTCACTAGCTTTTT 3312 29 100.0 37 ............................. AAGGAGTGAGTCGCATGAATTTCTTAATTGGCGCCGG 3246 29 96.6 37 .............T............... AAGTAACGATATAAATTATCTGTGCTATTAGTAACCG 3180 29 100.0 36 ............................. GAAGGATTTGGACCTACAAAAAATGATCAATCAAAC 3115 29 100.0 35 ............................. GAATAACCTTGTATGATTCCTAATTGCCCTTTATA 3051 29 100.0 34 ............................. TTTATAATCGCATCTTCTAAAGCCATTGCAATCG 2988 29 100.0 37 ............................. GACGATTGAACAGTTCCGCCACCGCTTGAAGTTGACG 2922 29 93.1 0 ....................A.......T | ========== ====== ====== ====== ============================= ====================================== ================== 26 29 99.3 36 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : GTAGCAAGTGTTTGTTATTATCACATATGATGTAGGTGAAAAAAGAGTGGGGAAAGTATGTAAAAAGCTTCGAGAGTATCTCGATTGGACACAAAATTCTGTGTTCGAAGGGGAAATAACCATTGGTAAATATACACAATGTATGGCAGATTTAAGTAACATTGTAGATAAAGATACCGATTCTATTTATGTATATGAGGTTAAAAATCCGCGAAATATAAAAAAAGTAATTCATGGAAGAGAAAAGAATCCTTTCGATTTATTTTTATAATAAAACGGTGTAGGGGAATATTATAATTATTCTAAATAACCTTGTATTTTGCAGTGAATTTATTTTTCAGCAAATGTCTTTAAATCCTTGTGTATCAAGGGATCAAGCCATCTTTTGAGAAAAGGTAAAAACATTACTGCTGGTTCACTGCAAAAAACAAAATATTGATTCATCAATAAAGTGCCTAAGCCCTTGATATAAAAGGGTTCTTGTTGGACTTGTTTTGAGA # Right flank : AGCCTTAATATGTGATCTTTTTAATCACTCGAATTCTAGTACTTCTAATGTTTAAAATTAAATCATTATTTTTGTAATTTTAAAAGGTTACTATCATAAGAATAGAGAATAAATAAGAGAAAAAATCAAAAGGTGAAATAATTTATAGACAAGGGTATGTCTTTCGTTATTAGCAAGTTATATTTTGACCATTTATGAAACCGCTTTAAAAAGGGGGAGTTAGAGATGACGGAAAAAATAATCGCTGCTTATCGTTTAATGGATAAGGTGGAGAGCTATGAAGATTTTAGTTACCACTCTCATGATAGGTATGAAATATACTACTTTCATGGCGGGGAATGTAAATATTTAATTGGAGACCGTATTTATCGTTTACAAGAAGATGATTTAATTATTATGAATGGATTAACGTTGCATCGCGCTTATCCTGAACCAGGAATTCCTTATGAGCGGAGTGTTATTGAGTTCTCTTCTGAATGGTTGCGACCGATTTTGAATAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 14605-15213 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGXFA010000109.1 Cytobacillus oceanisediminis strain 1T3 NODE_109_length_15350_cov_26.129081, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 14605 29 100.0 36 ............................. GTAAATTCAAATGAAGCTGTACTATCTTTTGTGGAA 14670 29 100.0 34 ............................. TAAAAAAAAGAACAGGAATTAATCCTGCTCTTTA 14733 29 100.0 37 ............................. AGATAGAAGCAAAAGAATTCCTTATGGATTAAGAGAA 14799 29 100.0 35 ............................. GATATCAACTTGTATCAAGCTGTCTTCACTTAAAT 14863 29 100.0 35 ............................. TTTATTAGGAGAGTGAATATAAATGAGCAACTATC 14927 29 100.0 34 ............................. TTCGTTTAAGTGAATGATTCTATAACGATCGTGT 14990 29 100.0 35 ............................. TTGATAACCGCATTTTCTAATGCAACTGCAAAAGT 15054 29 100.0 36 ............................. ATGAAATAAACAGCCGGTTCAGATGTAAATAATTCC 15119 29 100.0 37 ............................. TACGAAAGTACGACTCTAACCGCATCATTAATTAAGG 15185 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 10 29 100.0 36 CTTTTATCTGAACGTAGTGGGATATAAAT # Left flank : AGCCTTTTTTCTCAGTATGAAAATAGAAACCAACAGTCTCTAATTCACTTATATCGCGGTAAATATTGCGTTTAGATGTCTTTGTAATAAGAGCCAATTCCTCCGCAGTTACAAAATCTCCAGCACTAAGGTAGTCAATAATTTTAAAAAGTCTTTCCACCTTATTCATTTTCACCTAAAACAGCTCCTAAAATAAATTCCGATTTACTAATAAATATAATATACTATATATAATGATAACCTGTCTCAAAAACAGTGATTAAATATATAAAATGACAACCAACTATATTATAATTACTATAATTACGCTCAAAATCTGCAGCGAAACTATTTTTATTAAGAACAGCTTCAAACATAGAAGTGACAAGGGTTTGCTTACTTTTTTATAAGATAAAAAAATACACAACTATAGGTTTGCTGCAAAATGGAGAAATATTATTAAAACAACAATCGCCTCAAAACCTTGATACATATAGGTTTTTCGTATGATAAATTTGAGG # Right flank : GGATATAACATATCTCATAAGCCCCAAAATGAACTTGGACAATAAGAGTAATATTTATTATACTGCTTAATGTACCAAGGAGGCTGACATCATGAAACGAATAAAACATTCTAAAGAATTTAAATTACAAGTCATCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATCTGAACGTAGTGGGATATAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //