Array 1 33-548 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKIO01000034.1 Actinomyces massiliensis 4401292 contig00034, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 33 28 100.0 33 ............................ CGCTCAGCAGCGAGGGAGAGCGTGTGACGACGC 94 28 100.0 33 ............................ CGCTCAGCAGCGAGGGAGAGCGTGTGACGACGC 155 28 100.0 33 ............................ CGCGCTGCGCGCGGGGGCCGTAGCGGCCCAGAA 216 28 100.0 33 ............................ CATGCTGGACTGGTGGCCAAGGAGAGGTAGCGG 277 28 100.0 33 ............................ CAGACGGGGCGCGATGGGTGGGGACGGTGAGCT 338 28 100.0 33 ............................ CCGACTACGGGATTCCACCTCACGGGCGCCGGC 399 28 100.0 33 ............................ CAGGAGATCGCCGTGGCGAAACCCTCCATCGGG 460 28 100.0 33 ............................ GGGCCTTCTGGGTATTGACGCGGATGTCGTCGA 521 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 9 28 100.0 33 GTTAACCCCGCGTAAGCGGGGATGATCC # Left flank : TCCGCTTCCCACCGGACTGAGTCCGGCCCGTCG # Right flank : TTCTCGGCACGCATCACAGAACCTCGTCACTCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACCCCGCGTAAGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [15.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 490-35 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKIO01000035.1 Actinomyces massiliensis 4401292 contig00035, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 489 28 100.0 33 ............................ GCGCATACTCGGCATACCAGGTGCGCTCATTCT 428 28 100.0 33 ............................ GTGCGCTGGAATTCGTCGTTGCCGTAAACGGTG 367 28 100.0 33 ............................ TAGCGTCATCCAGGATGCGGCGGCCCGCGCCGT 306 28 100.0 33 ............................ CACCCGCATTTCCGTATTGAGTCTGTCCCGCAC 245 28 100.0 33 ............................ TGGAAGATCGATCCGGTGATCGAGATGGCCCCA 184 28 100.0 33 ............................ GGATTTCGCCACCAAGGTGACTGGCCTGACCAC 123 28 100.0 33 ............................ GCATACCGGCGACAGGCCCGGGATCACGTCCTC 62 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 33 GTTAACCCCGCGTAAGCGGGGATGATCC # Left flank : AAATTCCCGTCAGGATTGGAGTAGGAGAGCT # Right flank : CGCCGTGCGTCAGAGTCACTTCCACCGACCGAAAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACCCCGCGTAAGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [21.7-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA //