Array 1 93220-93486 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOOY01000008.1 Acetobacter orientalis strain DmW_048 Contig_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 93220 28 100.0 32 ............................ TGTGTAGCGTGCGAGAATGGCCTTTTCTTCTG 93280 28 100.0 32 ............................ TTGATCGCCTCGCCGTCCCAGATCGAAAGCTC 93340 28 100.0 32 ............................ CGTGTCCTAGACCCATTCGGCGGCGCTGGCAC 93400 28 100.0 32 ............................ ATCGCAGGCATGGCGAATTATGCGCTGGCGAC 93460 27 78.6 0 ....................-..GTTTT | ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.7 32 CTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : GCCCTTGTGGCTGGCACCCCCCTACCCAGCCCTGTTACGGCCTGATAGAAAAACCACCCAGCACAAAGCTGTTGTGTAATAAGGAGCACACCCCATGCAAATGACACTCCGCCTTGCCTGCCTTATTGGCATTGCCTTTGCAGGTGTGCTGCGCTTTGTAGCCCCACATTACCACCTTACGGCAGAAATTGTGGGGGCCGGGTTTTTAATAACCGCTCTGGTAGCCACCGTCATATTAGACGAAACAGCGCCTGCCGGTATTTCAGCCTCTAAAAAGTAGCCACTCCCCCTGCCCCAAAACAGGCCAACACGCCTTAAAACTGGCTATTCCGCCCAAGCCTAGCTACAGTGCCTAAACAAACCCTTTTTTGACCCTTTTTAAAACACCTCAAAAAGTTCTTTGAAAATCAAAGCCTTAAAAACCGCCCTCAAAAAAGGGGTAAACGCACTAAAACCCCTTAAGCCTTTGTTTTCTTAAGCATATCTCTTTTTCCCTTCTA # Right flank : TTCTCGTGCTAAAGCGCACTCTCCAACTCTGCTTTCAAACTGGCCATAAGGCTGGCAGCGGGTAAGCTTCGGGCTAGGGGGGCGCCTTGCCCGGCCCATTGGGCGGCAAACCCGTGTTCCCCTTGGTTTTGTGCTGCGGTATTGAGTGCCTTGGCCATATCGTAAGCTAAGGGGTATGCGGGGCATGCTTGGCCTGCCAACGTTTGAGCAAACGCCGTAAATTTATTAGGCAAAGAACGTGCCAAACGGCCAGAAAGAGCTGTAACCATTTCTGTTTTAAAGGCACCCGGCCCGGTAAGAGCCGTGCGATAAGCTGCATTAGCGGCAGATTCTGGGCAACCAATAAACGCTGTACCTAACTGGGCAGCCGTTGCCCCCACTTTAAGGGCTGCGGCAATAGCGTAGCCTGTCATTATACCGCCAGCCGCAATAATGGGTATTTGGCACGTTTTGTGCAAAAGCTGCGTTAGCACCATTGTGCTTAGGGCAGTGTCTGGCTG # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 20905-20576 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOOY01000020.1 Acetobacter orientalis strain DmW_048 Contig_21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 20904 28 96.4 32 ........T................... ATGGCCCCGCATAAGAGCACTGGTATCTGTTG 20844 28 100.0 32 ............................ AAGTGCGCATCAACCGCCCGGCGCAAACCACG 20784 28 100.0 32 ............................ TGTGAGGGTTTAGCTTACTTTGCGCCACGCAA 20724 28 96.4 32 ....................T....... GCTGTAAATGTCCTGAAAGCCCACTAAAACGG 20664 28 96.4 33 ...........T................ GGGCCCACGTTGCCCAACGCAGCTACGCGTACC 20603 28 71.4 0 T......A....G.......T.T.T.TG | ========== ====== ====== ====== ============================ ================================= ================== 6 28 93.4 32 CTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : GGCTTATGGGGCGCTTTCTGTAGGTGAATTGCTTATTAGCGCGCTTGGCCTTGCCGTGGTGGCCCGCTATGTGCCGCTTAATATTGGGGCGTTTATGATGGGCAGCTACTGCGTGTCTAACGGTGTGGCTATGTACCTTGGCAGCATGGTGGCCAATATGGCTGCTGTAAGCGGTGCTGTTGGGGGCGAAACTGTTGCCGCAACGCTGCCTGTTTATGCCAGTTTGTTCCGCTCTCTTTTCTTTTTAGCTGTAGGGTGCACGGTGGTTTTTGTGGTGTGCCTGCCCTTTACACGGCGGTGGGACGCCCAGCACCATGCAGCACTTGGCATTAAAGCCAGTACAAAGGGGTAAAGTTTACCCCTAAAATACCCCTTTTTTTAGAGCCAAAAATAATCTCTTTAAAATCATATACTTACAAAGCGGCTTGCAAAAAGGGGTAAAAGCGCCAAAATAGGCTGTAAGACGCACAAAACTGCTCTTTTATAACCATATCAGTCTA # Right flank : TGTTGTTAGGGGCTTTTATTGTCTGTTTAGAAAGGTGTAAGCGGGCGAGTGGTGGAGCTGAGGGGAATCGAACCCCTGACCTCCTCATTGCGAACGAGGCGCTCTCCCAACTGAGCTACAGCCCCGCCTGCTTTATTTTGCGTGTACAGAGCGGGGTAAAGCCCTGTCAAGTTTAGGTGGCATGCGGTAAACCGGTTAAACACACTGCATACTCTTATTGCAAAGGAGCAAATATTTGCTGTTTAGCCTTTATATGGTGCTAACGCGCCTGCTGGATATTTATTGCTGGATTTTGCTGCTATCGTGCATTTTTATTAATTTGTGCATGTTTGGTATTTTAGACAGCCGTAACCAGCTTGTTTGGAAAGTTGGTGTGTTTTTTAGCCGTGTGACCGAGCCTGTTTTGGGGCCTATACGGCGTATGCTCCCTAATTTGGGAGGGGTAGACTTTAGCCCCATGATTGTGCTGCTGGGCATACAGTACATTGTGCAGCCTTTGC # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.67, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //