Array 1 38090-31775 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNTB010000013.1 Lactobacillus delbrueckii subsp. lactis strain FAM 24849 FAM24849-i1-1_scf13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 38089 28 100.0 33 ............................ CTTGTATCGGCAAGAGACTTGTACAAGGCACTG 38028 28 100.0 33 ............................ TTTATCCAGACCAGACAGCTAGTGTAAGCGTTG 37967 28 100.0 33 ............................ TTCCAAGATTTGACTTGCGTTAGTTTCGATTCT 37906 28 100.0 33 ............................ TTGTCAGCTTTCGCCATTGTTTCGCCGTTAGGG 37845 28 100.0 33 ............................ CTTTTTGGAGACTCCGCAAAGGACATCCACTAA 37784 28 100.0 33 ............................ TGGTCGGACAACCTATGTGCACTTTGCTTATGC 37723 28 100.0 33 ............................ TCACCGCCCGAATATTTTTCTAGGAAACCGGCA 37662 28 100.0 33 ............................ CCGACTTCGCCGGCGTTTGACTTACCATATACA 37601 28 100.0 33 ............................ TTGTAAAATTCTATTTGATGGAAAAAGACAATA 37540 28 100.0 33 ............................ TCTCTTCCTTTGAGGTACGACATAGTTGAGCCA 37479 28 100.0 33 ............................ CCACGGGCAGGCTAGCGCTAGATTAATTAGTAA 37418 28 100.0 33 ............................ TACACAAGCGTGTAAGCAGTACATAGATGTATC 37357 28 100.0 33 ............................ CGAGGGCGGGAAGCAGAGATTTACGCCAAAAGA 37296 28 100.0 33 ............................ TATAATTAGATCAAATGAAAGAGGTAAAAAAGT 37235 28 100.0 33 ............................ TTGTTTGCGCTTCGTCCTCCCACTCCTTGACCA 37174 28 100.0 33 ............................ TTTTCCTGGTAAAAAATTTCCTGGCCTAGCAGA 37113 28 100.0 33 ............................ CAAGGTCTTGATCCTTGTAGAGCTTATCACCGT 37052 28 100.0 33 ............................ TGGATTGAAAACATCGAGGAGCCGGTGGTCTAG 36991 28 100.0 33 ............................ TGTTTAGACTAAATTGCAAGCCTTGACCTTCAC 36930 28 100.0 33 ............................ ATCATCGTAGCCCTTAACGGAAGTTCTGCTGAC 36869 28 100.0 33 ............................ TGTTCTACTCCTTAAATTGCTTTGCCCACTCAT 36808 28 100.0 33 ............................ TAAACAGCAGTCACTATACGACTTTTTCAACCA 36747 28 100.0 33 ............................ TTATGGCATTTTGCCGTTTTAAAGCAACAAAAA 36686 28 100.0 33 ............................ TTCCACTTACGACAGATTGGGCTCGTTACCATG 36625 28 100.0 33 ............................ AAGGCTTGCATTACCACCGGTTAGATGTTAGTA 36564 28 100.0 33 ............................ TGGGAAGAAACCTTTGCCGAAGAATTAAGAGAG 36503 28 100.0 33 ............................ ATCGCCATTGGATGGTTTCCAAGCTGTGCGGTT 36442 28 100.0 33 ............................ TATAAGGACGGTTTGACAACTCAAACTATTAAT 36381 28 100.0 33 ............................ TAGTTGGTGCTGATATCTCTGCGAGGTCTGGAG 36320 28 100.0 33 ............................ TACTTCTTCCACAGGAACAAACCCGCTTGAAAC 36259 28 100.0 33 ............................ TAATGGATCGAATGCTGATCGTCAGATCACCGC 36198 28 100.0 33 ............................ CTCCACCATTCCTCAGTGTGCTGGTAATGCCGT 36137 28 100.0 33 ............................ TAGTGTCATTTCCCAGAGAGCAAACACGGTATC 36076 28 100.0 33 ............................ TGTTCGATTGGTTAGCTTTCGTTGTGGGTGATA 36015 28 100.0 33 ............................ TATTCAGCACGAGTTAACTACTGGTATCACTGC 35954 28 100.0 33 ............................ TTTTCAGACCGGTTTAAGAAGTACAGCGCCGAT 35893 28 100.0 33 ............................ TGATGAAAGCTTGACCATCAATGACTACGCTAA 35832 28 100.0 33 ............................ TGTTGACGTAGTCGCCACTAATCCAGTCGGTGC 35771 28 100.0 33 ............................ TGTCGGCGGATCCATTTGGGATGGTGTTAAGTC 35710 28 100.0 33 ............................ TGTGTATAATGCGTGAATTATGAAAAAGCGGAA 35649 28 100.0 33 ............................ TGGCCGCTCTTGGGCTTGCTGTGGTGCGCTATG 35588 28 100.0 33 ............................ TAGCTTCGATGATCCTAGCGAGTACTGGACAAA 35527 28 100.0 33 ............................ TTCTGAGCGCCGTTTTCGACCGTAAACTTTAGG 35466 28 100.0 33 ............................ CATTCGGGGCAATTGAAGAAGCCGCCGGGGAAT 35405 28 100.0 33 ............................ CAGTTCTTCTGGATTCACTAAAGGACCTTTGTC 35344 28 100.0 33 ............................ TAGCCCGTTACATGCGATTGTGGGGCTTGACCT 35283 28 100.0 33 ............................ TCGTAAATCAAGGTTACAAAATTTCTCTTCAAA 35222 28 100.0 33 ............................ TCGCTTGTTCAAAAATTCTACTTGCAAAGCAAA 35161 28 100.0 33 ............................ TCATGAAGAACATCCAGACATCCCAATCAAGTG 35100 28 100.0 33 ............................ TCATCATAGTTAAAGCCTTTCAACTTACACATG 35039 28 100.0 33 ............................ CCAAAGTCTGAAAGAACGTCTTTTAGGTTGCCA 34978 28 100.0 33 ............................ TTTCTTCTTAAAAATGCAAAGATCCGGAGCGAG 34917 28 100.0 33 ............................ CCTACGATCGAACCAGATTCCCACATAATATCG 34856 28 100.0 33 ............................ CCACATTGTGCCCAGAAATATGAACCAACTGCC 34795 28 100.0 33 ............................ TTCGTCCGCTGGCCAAAAGCTCCTTAACGGTGA 34734 28 100.0 33 ............................ TTTTTTTCATCGCTTGTCATCCTCGTCATGGCG 34673 28 100.0 33 ............................ CTTCAGTCATGGTCTTTCCACAAATCTCTTTGA 34612 28 100.0 33 ............................ TTCTTGGCTCTTCGGGCTACCCTTGCCCGCTTG 34551 28 100.0 34 ............................ CAAAGCACTAAAGAAGAACACCAGCGCCGGTTGG 34489 28 100.0 33 ............................ CAATAGACCAAATTATCTTTTCATGAGTATCGA 34428 28 100.0 33 ............................ CTTCATTTGGGACGGTTTCACCGACCCGGCCGG 34367 28 100.0 33 ............................ TTGTTAGAAGTCGATAACCCTAACGAGGACGCC 34306 28 100.0 34 ............................ CGGCAACCAGTTGGTCGTACAAAGCGGCCGTGAA 34244 28 100.0 33 ............................ TGCGATCAAAGATGGCCAATTTGACGCCGTAGA 34183 28 100.0 33 ............................ TTGCCGGCGGCCCGTGCTACTTGGTAGCGCCAA 34122 28 100.0 34 ............................ TGCCCAGCTGGAGGAAGCTGGGCTAAGTTGTGCG 34060 28 100.0 33 ............................ TTGATTGGCATGCTATTTAGATTTAATCCATCT 33999 28 100.0 33 ............................ TAAAGGAGTGAGGAAAATGTCAATTGGAACAAG 33938 28 100.0 33 ............................ CTTGCTCGTGTCCGTGGCGGCCTTCTTAGCAAT 33877 28 96.4 33 .......................A.... TTGCTGTAATCATACCGTTAACAAGGTCAATTA 33816 28 100.0 33 ............................ TTGAACGGTAACACGACAGTTACTGGGCGACTC 33755 28 100.0 33 ............................ TAATTCGACCATCGGGCAGGTAGTCAATGGACA 33694 28 100.0 33 ............................ TAAACTAGCCATTTTTCTCCTCCCAACGTTTCT 33633 28 100.0 33 ............................ TCGTGGTCAGCAAGCAAGGACGGCGCAAGCTAA 33572 28 100.0 33 ............................ TCAGCTCCAGCAAACCATCTGGCAAAGGTTGGA 33511 28 100.0 33 ............................ TGCCACCCGATAGTCGGGATAAATGTCGCAGTA 33450 28 100.0 33 ............................ CGCTGTCGGGATCAACTGGGCCGCCACAAACTT 33389 28 100.0 33 ............................ TTACATAGCTTTCATAAGTAGTCATTTTTCTAA 33328 28 100.0 33 ............................ TGTAGTACATGGCGATCCTCCTAGAATGGCAGG 33267 28 100.0 33 ............................ CAGCTAAACAACGCAAGTTTGTAGCTGAATATG 33206 28 100.0 33 ............................ CGTAGATGCAAGTCTTTTTTGGAGATTTTTTCG 33145 28 100.0 33 ............................ TGCTTTCCTTAGCTTGTGCCCAAGCCATCTTGA 33084 28 100.0 33 ............................ TACAGAAAACCTAGTGACGTAATGGAAGCCGTT 33023 28 100.0 33 ............................ TTCTTGACGCTATACGGTACTTTGCGGCCGGCG 32962 28 100.0 33 ............................ TCAGCTCCAGCAAACCATCTGGCAAAGGTTGGA 32901 28 100.0 33 ............................ TGCCACCCGATAGTCGGGATAAATGTCGCAGTA 32840 28 100.0 33 ............................ CGCTGTCGGGATCAACTGGGCCGCCACAAACTT 32779 28 100.0 33 ............................ TTCAGTTGATCAAGACATGCTGACCAGAGGACA 32718 28 100.0 33 ............................ TGTCATTATTGGTGAACGTTCAAACGGTAAAAC 32657 28 100.0 33 ............................ TACTTAGCGAATATTTCATACCGTCAAGTTCTA 32596 28 100.0 33 ............................ TGAGTACCGCAACGAACTTCCAAGCCAGTTAGG 32535 28 100.0 33 ............................ CTCCTCATACCGGCGAATTAGACAACCGGCCCC 32474 28 100.0 33 ............................ TCAATCGTGCCAACGTACTCACCCCTTGCATAA 32413 28 100.0 33 ............................ TCTAGTCATTCTGCTTTACGTATAGATTTTTTA 32352 28 100.0 33 ............................ CGCTAGGGGCTATAATACGATTGTCTAAAAAGC 32291 28 100.0 33 ............................ TCGTAGGCAAAGACAATGTCGCCATATCTGCTC 32230 28 100.0 33 ............................ CGAGAAGACAGGAGAACCTGTCAAGGAACATGA 32169 28 100.0 34 ............................ TGGATCATCCTTAGCGTCATAGTTCAGAACACAG 32107 28 100.0 33 ............................ CCTGAGATCAACGCAAAACGGGACGATGGTCGG 32046 28 100.0 33 ............................ CAGCGCTGTCTGCTGACTCATAGTCACCATTTG 31985 28 100.0 33 ............................ CCGGCTGCAGCTTGTACCTTGCCTGTTATTGTG 31924 28 100.0 33 ............................ CGTGATGATAATAAGGCTGAGTGGATGCCTTTT 31863 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 31802 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================== ================== 104 28 99.8 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTTGATAAGGAAGGCGTCCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAGCTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : GTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAGGCTATACGAGTACCTGAAAGGTCGCGTCAAAGGCGAAGAAAGCATGACGCAAAAGTGCGAAAGAAAAGGTTTACCGCTGACGCCAGAGTCTGCATTGATTGAAAACCGGGATGCGATTGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //