Array 1 349769-344177 **** Predicted by CRISPRDetect 2.4 *** >NC_021058.1 Sulfolobus islandicus LAL14/1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================= ================== 349768 24 100.0 41 ........................ GTCAATAGTATAGTTTCTTTAAGATGATCTTTCACTTCTTC 349703 24 100.0 44 ........................ AAATGTAAAATATTTCGTAACGACTGAAGACGTTATCAATGCTC 349635 24 100.0 42 ........................ CACCGTTGTTGTCGACGAACTCGACAACTTCAGAATCATCTA 349569 24 100.0 42 ........................ GTCATAATAAGACCTGGACAAAAACTAGGTCTTGATCTGATG 349503 24 100.0 41 ........................ CATAACTGATTTACTAGTTGAACAGTGCCCGCGTGCCCGAT 349438 24 100.0 40 ........................ GGTATAATGACGCCATATATCATTTACAGGAAGCATATGA 349374 24 100.0 40 ........................ GTATCTGTATTGGGGGAATAATCCATTACCACCGATAAAA 349310 24 100.0 39 ........................ AGGAGAGATTCAAGATACGTATGGTACTGATGATATATT 349247 24 100.0 41 ........................ TTAAATAGTCTAGAAGCTTAGGCGAATTGTCTGGCAAATTC 349182 24 100.0 39 ........................ GCGTATTAAGATTTGAGTTAGGGGTTGGAAAAATGAAGG 349119 24 100.0 45 ........................ CTATTGAATCAATTAAAGATACTACAGTAACTGGAATAAATGCAT 349050 24 100.0 45 ........................ AACTTTTGATAATGCAGATTCAATAGATACTTCAACTTATGCTCA 348981 24 100.0 39 ........................ CTAAATATTCAAGTAGAAAAGTCCGAGTACGAATATGAA 348918 24 100.0 39 ........................ GTAAACTTGACCAAACTATACCAAACGGCGTTATAAGAC 348855 24 100.0 41 ........................ TTAAGACAACAAATTGAAACGTTTTTGCAAACTGGGTATAC 348790 24 100.0 38 ........................ TAGCGATTTTTTCACCCTCCTAATTACGTCATCAGCAT 348728 24 100.0 41 ........................ ACGGCAAATGATACTGAAGAAGGAGCTGTTTCTGTTTCTGA 348663 24 100.0 44 ........................ AATTATCCGTTACGCTTAGCTAGACTAGTCTCAAAAGAATTAGG 348595 24 100.0 41 ........................ CTAACATATATCCCTCCTGCTCTCAGTAGTGTCTTAATTTT 348530 24 100.0 44 ........................ AGCACTTCCATTGCCATTTTTTCTAACAATTTTCTACTTTTCTT 348462 24 100.0 40 ........................ CTTTACTTAGGTCATTCCATCTGGTATAGGGGGGATTACC 348398 24 100.0 40 ........................ GGTTCTTTAAGAAATTCGTAGAAGCAGAAGAAAGACTAAG 348334 24 100.0 44 ........................ AAAAAGAACTATTCCTAGAATTAGACCACGAAATTAGAGAGCTA 348266 24 100.0 41 ........................ AACATGAAAGAAGAGGAGATAAAGCAGTATCTCAAGAAGAT 348201 24 100.0 41 ........................ TTACGGTTTGTCCGTTTAATGTGAAAGCGGGGTTAAACTTA 348136 24 100.0 38 ........................ TTATGAGGTTTTTCACTAACTGGAGCTAGTGTAATGTT 348074 24 100.0 41 ........................ TATACAGTTTGTATTTTTTTCATGCAGCAGGCCGTAAAAAT 348009 24 100.0 44 ........................ AATTTATAATGTACATTTAGTCCAAGATAGGATATTTGATACTT 347941 24 100.0 40 ........................ CTAACTCATCTCTTTCTGCAATATTGAAAAAATCCTTCAA 347877 24 100.0 42 ........................ AAAATCATTTTCCCTGATTTCATCATACGTCAATATTATTTC 347811 24 100.0 38 ........................ GTAGAAATCTTTCTCATTTCTGAATAGAATCCTTCCGA 347749 24 100.0 40 ........................ GGGAATCCGGGGAAACCGGGGAATCCCCCCGGGTTTTTGT 347685 24 100.0 38 ........................ GCCTTATTTTTTAACGTACTTCTTCATGAAGAGAAGGG 347623 24 100.0 39 ........................ AACATATCAGCTAACAGGCTCATTAACGAGAGAAGTCAG 347560 24 100.0 43 ........................ TATCTCTCTATCTATAGATAACCCCAAACAAACAAACCCCTTA 347493 24 100.0 39 ........................ AAATTTTTTAAATATTTTTTTCAGTATCTCCATATTTAT 347430 24 100.0 38 ........................ CTCGCTATGGCTTCTACGATTAACTCTCTCGTGCCTTG 347368 24 100.0 39 ........................ TCTTGGTCTGGGATGACTGAACAATAACCAAGAATTACC 347305 24 100.0 41 ........................ TTCCTCAAGAGTTCTTCCGCAATACTTTTTGGGATTGTTAT 347240 24 100.0 40 ........................ CAATTTTGTTATACACGTTTAATTTTACTTCCTCCATTTT 347176 24 100.0 40 ........................ CTTTCATATTTTTGGTTTCAAGGTTTTGGGGTGTCATTTT 347112 24 100.0 42 ........................ CGTCATATGTTCATCGAGGATATCATCTATTATTCTGGACGC 347046 24 100.0 40 ........................ TTAAAGAGAATCATGGAAGGTGATAGGTTTGCCTCTATTG 346982 24 100.0 41 ........................ TTTACTTGAAACTTAACATTCATCTCTTTTAAAAAATTAAT 346917 24 100.0 41 ........................ TCTAAGCCGAAGCGAGGTCATTAGGGAGGCTATAAAACTTT 346852 24 100.0 42 ........................ GATCCCTTAGCTGCTTATCTCTCTCTTGCTCTTTCTTAGCTT 346786 24 100.0 37 ........................ GGTTCTTATGTTAACGGAAATGTAGCAAATCCAGGAA 346725 24 100.0 42 ........................ AAAAGTATCATCACGGCAAACGGTGATCTATGGACTGAAGTA 346659 24 100.0 41 ........................ ATGCCTGCTGCTGCAATAGCAGCACCCGCAATGTAAGGCCA 346594 24 100.0 39 ........................ AAATTTAATGAAGATTGTTTCGTCATCGATAATTATATA 346531 24 100.0 39 ........................ CAGCGTAAAGGATGAAGGCGAACGGCATATTGGCTACTG 346468 24 100.0 41 ........................ TCAGGAAATCCAATAAGTTCTTTGTATTCCTCTCTAGTAAC 346403 24 100.0 37 ........................ AAATATAGTAAGATTGCTAGGAGAATTAAATGGGCAG 346342 24 100.0 39 ........................ TTGTTTGGTATAATTGTAATATTATCAATAGGCATTGTC 346279 24 100.0 44 ........................ ATATTCTTAGAATACCTAGGATATAGGGACAATGACTGCTTTAG 346211 24 100.0 40 ........................ TCATGACGTTACAGGATCCATCTTCTAGTCCGTTTACACT 346147 24 95.8 42 A....................... TAGAAAGATTTTAGGGACTTCACCTCTCTCCCCCCAACCTCT 346081 24 100.0 38 ........................ AAACTTCCGTAGAATTTGTCTCTCTCCAGGTGAGCATA 346019 24 100.0 42 ........................ GTTACATTATGGCATTAAAACTATCAATGCCTAACAATGAAA 345953 24 100.0 41 ........................ GTTACAAAATACGCCAGAGCTCTGATAGATATCCCACTGCC 345888 24 100.0 42 ........................ CTTCTTGATCATTCATAACCACTAGAAGGTCAGAATCATTAA 345822 24 100.0 38 ........................ TCATCTTTGACTTCAGAGATACTAAAATGAGAGCATAG 345760 24 100.0 40 ........................ CTTATATTTCTATATTGGAATTTGACTTCTACTTAGAAGT 345696 24 95.8 40 .......................A ATTCTTTCAAAGCTAGTTCACTCATAAAAAAACTTGTCTA 345632 24 100.0 42 ........................ CTTACAATACCTCCTTTCTACTTTTATTGTAAAGTTACGGAT 345566 24 100.0 41 ........................ AAATATTGGTATCGTTTTGCATCCTTTTCGAAAAGGAATAG 345501 24 100.0 41 ........................ ACCCCCTTACTTGTGCTGTTTGATGGAATGGTAAATGATGA 345436 24 100.0 41 ........................ ACTCGATATCGCTTGTCTTATGCATTCCTCACTTACTCCAT 345371 24 95.8 41 .........G.............. ACCTTTGCTCACTGTAAAGACGTACAACTCAGCATGATTTT 345306 24 100.0 44 ........................ CTGATCCTGGTTTTTCCACGCTTTGGCAATAACTCCGAACTTCT 345238 24 100.0 41 ........................ TCATAGAAAGCACTCTTGATAGCGATCAACGTTAACAGCTT 345173 24 100.0 42 ........................ TTAAAGATCCATTTTTGCCCTAACGACACTAGACTAATCAGT 345107 24 100.0 40 ........................ TCCTTTAACAACTGTTCTAACTCCTCCTTACTCAAAACTT 345043 24 100.0 40 ........................ TAGTTGAAATTGCAAAGCTAATGTACTTATTTCTATAACT 344979 24 95.8 38 A....................... AAATGATACCATCCCTAACAACTCCGCCGATACTGTCT 344917 24 100.0 41 ........................ CTGGAAATTCGTACATTCTGCCTTTTACATAAATATCGAAT 344852 24 100.0 45 ........................ TATAAACCTTTCTATCTTTCAATCTCTCTTTCTCAATCTATCAAT 344783 24 100.0 42 ........................ TGAGAACACGTTGTATAGGTTCCGGTAAGTACTTAATTATTT 344717 24 100.0 42 ........................ CTAACGAATTGATTCTAACTTCTAGCAATCTTTCTACTGAAT 344651 24 100.0 40 ........................ TAGAAGATGTGCAACAGTTATGTACACAGTATTGTACAAA 344587 24 100.0 38 ........................ CGCCCTCTCCTAACGATATTGCCCGTTTTTTGCGAGAG 344525 24 100.0 39 ........................ TCTGTAAGTGAAAGTATATAGTTCAGCGTGATTTTCCAT 344462 24 100.0 44 ........................ TCTGTATCCATCTTTTGTGAATCATATCCAAAAGCTTGCAATAG 344394 24 100.0 41 ........................ GGAGATGGGGGCCAAGCAAATGTGCCCGTGCAAGTTGGTGA 344329 24 100.0 40 ........................ ACTTTCTCTTCGTTTTGTGCCGCTTCTTTCAACTTTAACT 344265 24 100.0 41 ........................ ACTTGGGAGGCCGGCATTAGGGGGACATCCCCTAAAACCCC 344200 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ============================================= ================== 87 24 99.8 41 GCTAATCTACTATAGAATTGAAAG # Left flank : TACTAATTTTAATTTCAATTATTTCCGGATTAGGATAGCGAAGTCGTAGAGTTTGGATTTTTAAGTTTTCTATAGCGGCTTTAGTTCCTTCCACTATGGGACTAGGAACTACTATAAGTAATTTATCCTCCTTTTGAGCAGAAGTCTCATTAAGAAGTCTTAGAAGATAAGTTTCATTAAATCCCAAAGTTACAAAGTATGACTTCATCATTATATATGGTAATATCATAAATAAATAATTTTTGATTACTTTCGAGGAACTCTAATTACAATTTTTGTTCCCTACTATTTCCGTTGTTTTCCTTTTTCCTTGTTTCGTTTTGGGTTAGGTTGTTATCCTAAATTCATTATCTTTATGAAGAATTCCTTAAGATCCCGGGAAAACCCGGGAATAGTAAAAAAGATAAGAAAGAGTAATATAATACTAATCGAAGAGTAGAGAAGAAAAACTTATAAGAAAGGGAGAAGAAAAGATCAAATAGAGGGTTAAAAAACCCTCA # Right flank : TATTATGGCCTATGATTTTGACACACTTTCCTCAATTTTCCTTTCATAATCAAATTATTATATAAATTAATAAATTAAACGAGAGAACTCTTTAGTGAATTTACTGCACGTAATACGGGATATCTTTTTCCGTTGATGAGAAAAATTTAATACTTTATTTTTCGGATTTAGGGTATGATATTACTCTTAACACTTGGCTTTGATGAGAAGTTTCAATACCGTGCGTTAATGAGGCAAGGTAAGAGTATTGAAAAGGTCATTATTGTTGGGGGTTTTGAGGAAGAGAAGGCTAAGAAAGCGTTGGAATCCCTTACCAATTTCTTAAAAACAGTTAACGTTCCTTATGAGACTATTGAAATTGACCCTAGAGACTTTGAAAATATTGTTGAGAAAGTTGGCAAGGTTATTTTAACTAATGCAGGGAAGGATTTCATGGTTAACCTAAGCGGAGGGATGAGATTAATGATTTTAGCAGTATTTTCCGCCTTTTTATTGACTGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 353820-360962 **** Predicted by CRISPRDetect 2.4 *** >NC_021058.1 Sulfolobus islandicus LAL14/1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =============================================== ================== 353820 24 100.0 40 ........................ TTACTAGAATGACAAAGGAAGCACTAGGGCGTTTAAAGGT 353884 24 100.0 40 ........................ TTCGATTAAAGGAAATATTTTTTGACTTACATTTTGCATA 353948 24 100.0 46 ........................ TATTTCTAATTTGCAAATTAATAGATATGAAAAACCAAAACTTTTA 354018 24 100.0 41 ........................ TAATCAATACATAAAACTGTGTAGAAAACTTTATATACCCC 354083 24 100.0 39 ........................ TCCTTATTTTAGGTATTAGTTTATCCCAATCCAGGGTAG 354146 24 100.0 42 ........................ ACAAGTTAGGGACTACTTCTTGTAACTGCTCGGAGAACGCTT 354212 24 100.0 39 ........................ TAGATGACTCTTTACTTTCGATCTGAGTTTTCTTAATCT 354275 24 100.0 38 ........................ ATTAATTCCGTTATAACTTATGCGAAGAGTTTGATAGA 354337 24 100.0 40 ........................ TTCTAGTAGCCTTTCGAAATTCCGGCATTGTAGTAAACGA 354401 24 100.0 42 ........................ TTTCCTTTGCAAAATGTAATCCGGATCCGCCCCAATTTTCAG 354467 24 100.0 44 ........................ CGTTCAATCATGACAGAGGCTAACCCCATTGCCCTTAACTTGTC 354535 24 100.0 41 ........................ TTAAGCTTTCTATGATGTCATTGTTGATTATTATAACTTTA 354600 24 100.0 39 ........................ TAGACTCTAGCGTAGACTTTAAAATAAAAGAGAGGTGAT 354663 24 100.0 39 ........................ TTCTAGTAATATGGATTCTATACTATTCAAACGGGTATT 354726 24 100.0 37 ........................ CATACCACCGACTTCTCTATCTTATTAAGGTTTTATA 354787 24 100.0 40 ........................ TTTGGCGGGTAAGTTCTCATTCTCATAAAGTTCCACGCGG 354851 24 100.0 39 ........................ TATTTCGTTTTCCCCTGAGGGGGATTTGATTGTTTTCCA 354914 24 100.0 41 ........................ ATCCAGACATGACCAAATGGGTCATGTCTAGACCGTAAATT 354979 24 100.0 38 ........................ TTAATATCGTAAAATATCTCAAGTAAAACTTCATTTGG 355041 24 100.0 39 ........................ GTATTATTAACGCGAAAAATATCGTTATTATTAATACAA 355104 24 100.0 40 ........................ CTTAAAGCACCTACGCCGGCACCTATTAGTGTACCAATAC 355168 24 100.0 41 ........................ TTATCATTTCCAATTACTATCTCATGTGTATCGTGATATGC 355233 24 100.0 47 ........................ AACATAAGTAGAATTGAAAGAAGAGTAACATGTAGTACAACTCTCAA 355304 24 100.0 41 ........................ CTGTCAATAATGAAGGTTACGTCTTTTATCCCTACTTCCTT 355369 24 100.0 40 ........................ AATTCTTCTAAAAAATTAATTATTTCCTCTTTTATTTCAT 355433 24 100.0 37 ........................ GCACCTATGGCGACCCAAAACAGCGTGGATCCGCTGA 355494 24 100.0 39 ........................ ATATTTTTGATTATATTCTTTTTCTCAAGTATTTTTATG 355557 24 100.0 43 ........................ AATTATATCATATCAGTAAGCCAAACTAGTATCTCGAGCACAC 355624 24 100.0 41 ........................ GATCTTTCCTTGTGCCAGCAGTTCCTCTAGCTCCTTGCTGC 355689 24 100.0 40 ........................ TAGGATTTACACCATAATAAATATCGGCGGTCTCCCTGTA 355753 24 100.0 42 ........................ AATACCTCAATTATTTCGCCTTTAGTTAACAATAATGGTTTT 355819 24 100.0 39 ........................ TCCCATAACGCCTCAATGGGGAACGCGTGCTGATATTTT 355882 24 100.0 43 ........................ CATACCATTTATAAGGCTCCACCTTCGCCTTAGCCTTACCATC 355949 24 100.0 43 ........................ GAGTTTGACTTATCTCTCTACTGTTTTCCATTAGACTCACCCC 356016 24 100.0 40 ........................ CTGTTATTTCGTTGAACTGAACTACTACCGGAAGCTCTAA 356080 24 100.0 41 ........................ CCTATGGACCTTCTTAGGACCTCGTTTGTTAATCTTGGCCG 356145 24 100.0 40 ........................ TCTTGAAATTAAATCTAGAATTGATGGTATCGGCGTATAA 356209 24 100.0 40 ........................ TTATAAAAATTCAAAATGTATACAACCATTCAGCATACAA 356273 24 100.0 42 ........................ AGGTTTTGGATTAAAGGTTGCTAGAGCATTAAATAGGATTGG 356339 24 100.0 40 ........................ ATTTCTTCACGGTGTTTGAGGCAATACTCCCTATACTTCT 356403 24 100.0 39 ........................ TGCAATAACAGTTGTAGTAGTACTACTACTACCAGCAGA 356466 24 100.0 40 ........................ GCCCCACCAGCCATAGAGATCAAGTTCAGAAGGAAAGGTA 356530 24 100.0 43 ........................ TAGGCTTTATTTTCTTTATAACACTGTAACGCTCTTTATTTAT 356597 24 100.0 40 ........................ TTGGTTTTTTGCTTGGCAATTTTTGTCACTGGGAATAATA 356661 24 100.0 43 ........................ ATTCTAACGTTCCGTTTTTGAATGCTATCTTGAGAGGTTCAGA 356728 24 100.0 42 ........................ TCTTCGGGGATCGGTATCATGCCCCCAATCACACACAATATT 356794 24 100.0 39 ........................ ATTATACCGTGAAAGTAACTTATAATTAATCAAAAATAG 356857 24 100.0 39 ........................ TTTCTTTATTTGAAATCAGTAATCTGTTAGTGTTATTAA 356920 24 100.0 40 ........................ AGTCAAAGCGACTGGTATGCCCCAGTTCTCCGCATAAAAT 356984 24 100.0 41 ........................ TCTGCCCAGAGAATTCTTTATGGTTCTGGATATCCTTGGTC 357049 24 100.0 39 ........................ TTGGACTGATGAAAAGTGGATATTGCTCTATGAAATCAT 357112 24 100.0 41 ........................ TTACCAATTAATTCACTAAACTCATCTTGACTAATTTTTAT 357177 24 100.0 40 ........................ GGATGACCGGCTTCAAAAAATTCACTTGTATCTAAATTTA 357241 24 100.0 40 ........................ TATAATAGATTCTCTTTATTTTTCAGGTTAAATCCAATAT 357305 24 100.0 39 ........................ GGGCAAAAAGTAGAGAGTAAAGTTAGAAAGTAAAAACAG 357368 24 100.0 41 ........................ AATCTAATAGAGGAGCTCGAAAAGTACAAAAAAGAAGGAGA 357433 24 100.0 45 ........................ TATTTTTCAATTTTGCAGAAGTGCTTGGGCCCTTTGTCGGTCAGT 357502 24 100.0 40 ........................ TCTGAATTATTGAATTTATACATAAATTACTATCAACATT 357566 24 100.0 39 ........................ AAAATACTTTTAACTTGATTTGCTACGGCGGAACTTATG 357629 24 100.0 43 ........................ ATTCCTAAAGTTGTAATATTTACGCTTACATTTGTTTTTACTA 357696 24 100.0 39 ........................ TTTCGTGGCTATGGTATTATCTTATCTTCTTCTCCGGTA 357759 24 100.0 41 ........................ TTTTCTCCTGATTTACTTCTTTTCTTTCTTCACTCATTTTC 357824 24 100.0 41 ........................ GAGAAATTAAGAAATGATGGTTTTGAAGTGTTATGGACACT 357889 24 100.0 39 ........................ TCCGAATAATTACTTCCGTGTAGCTATCAAGAAGATTAT 357952 24 100.0 40 ........................ AGAATTTACAAAGAACTCAGAGGAGCATAATAGGGTAATG 358016 24 100.0 43 ........................ AATTTCTATACTTCTTTTGAGTAAAATTGGAGCACCCCTGCTA 358083 24 100.0 42 ........................ TCATCAATTCCTAAAGCCTCTTCAATTTCCTTCAATGTACAG 358149 24 100.0 44 ........................ GTTAAAGTTGCTGAAAGTGGAGGTTACGTAGAACTATACCTACT 358217 24 100.0 40 ........................ TATCCGTTAACATGAACATATCGGCAAAACCGAAGGGGAT 358281 24 100.0 39 ........................ AAACTTGTTTGACAAAGTCAGTATTGCAGACATAAGCAG 358344 24 100.0 40 ........................ ATTTCTATCAATTTCTTAAACTCTTCACTTGAAAGTTCTA 358408 24 100.0 39 ........................ ATATGAACAAAGGTTTATGCTACTGAACAACGCAAAATT 358471 24 100.0 43 ........................ AAGACGAAGATTATCAGACCTTTATTCATGTCAAATTAGGCTA 358538 24 100.0 40 ........................ AGTTGAAGGAGATGAACGTCTGAGTCATGGGGAGAGTCAA 358602 24 100.0 41 ........................ TAAATTATGCCCATAGCCCCAAAAAGCTCTTGAAAAAGCAA 358667 24 100.0 41 ........................ GTTTTTGAAAAAATTTTTATAATAAACATTTCAGGGTTTGT 358732 24 100.0 41 ........................ TAACACATATGAGCTGGAATTATGTTATGAGGAAAACGGAA 358797 24 100.0 42 ........................ GAGCGGGGGTATAGCAATTTTTCGAAAGCAGAAGAGAAAAAT 358863 24 100.0 40 ........................ ACCATTTAGTACTGCAGGGAAAAGGGAAGGGCTACAGGAC 358927 24 100.0 42 ........................ TCTATGTGAAAAGAGCAACCATGCATCTTTCTCTGCATTAAA 358993 24 100.0 41 ........................ ACCTTGTTTACCATACCACCTTAACCTACCAACAAACTCTA 359058 24 100.0 41 ........................ CGATATTCGAAATACTTACCGCCCTCACCTAACTTTACGTC 359123 24 100.0 41 ........................ ACCCGCATTCTAACACAACACTACGTTTCGCTTTTCGGCAT 359188 24 100.0 40 ........................ AACCAATTATCTCATAATCGTCAGTATTATCGATAACGCG 359252 24 100.0 42 ........................ ATTTTTTATTCACCTACCGATTTGTGACGAAACGAAACGGAA 359318 24 100.0 42 ........................ TTAATATTTTTTTTTGGCAAGCCTATTTTTTCTCAACATTTT 359384 24 100.0 43 ........................ CTAACTTTTTTTTGATATACTCTAATTTCTTACTCATTCTTTT 359451 24 100.0 39 ........................ ATTTTTTTAAAGAGGCCACTTTTTATTCCTAGTCTGAAA 359514 24 100.0 43 ........................ CATTTAGCCTTAACTCAAACTCTTGCATACCCGAATCCTCAAA 359581 24 100.0 40 ........................ ATGGCACTGGGGTCGTCAAAAAGCACTACGTCATAACGTT 359645 24 100.0 42 ........................ CTCCCTCTCTCTGTCTATCCTAACTTTTGAACTTACTTTCTC 359711 24 100.0 42 ........................ AGTGATTATTTTAGAATATGTCCCGCCATACCAATAGAAAGT 359777 24 100.0 41 ........................ GTATTGCTCATTATTGATTTGATTAACGACTTATCTAACTG 359842 24 100.0 39 ........................ AATTGATGAAATATTCTTCTATCCAATGTCGTTTAATGA 359905 24 100.0 41 ........................ TTCTCCTTTCTCCTCTTTCCATTTCCCGATAAGTATTATTA 359970 24 100.0 36 ........................ GTGATAGGGTTAAAAATAAGGGATAAACACATAGGA 360030 24 100.0 40 ........................ GATCTTGACCGGGTTTGACCTATGGAAACAGCAATAATAG 360094 24 100.0 41 ........................ TGTCTAGCTAATTGTAAATGATAATTAATAACTTTTGGATA 360159 24 100.0 41 ........................ AATGACGATTTCGTTCTCAACGTTGACGCAAAAGACGGCGA 360224 24 100.0 42 ........................ AAATGTCCTCAAAAACAACGTGATAGATCCTTACGAGACAGA 360290 24 100.0 40 ........................ GGTCTTGCTCTCATGAAGACCACTGCCTCACCAACTGATA 360354 24 100.0 43 ........................ CACTCTTTCTCCTATTGCTATTTTTCCCTCTTCATCATTTTCT 360421 24 100.0 42 ........................ GGGAATCATAGATTAAGATAGAGGGTGGAAATAAATGTCCCA 360487 24 100.0 36 ........................ ACTTTGACTTGTTTTTGCATCTTTTTATCCCCAATA 360547 24 100.0 41 ........................ TTTCGCTTAAGAATAACGCCTTTTCTACTTTCTCTTTGTTC 360612 24 100.0 38 ........................ TTGGAATTACGTAAAATTTCTAAATTATTCTTACGTAA 360674 24 100.0 43 ........................ TTTTTATTATTATCCTTAAGTTATATCCCTATCAATGATTTTT 360741 24 100.0 45 ........................ ATCATAAAAGAATGGCAAAAGTACAGTACTCAACAATTAACAGAG 360810 24 95.8 41 .........G.............. ACGATATAAACATGCCTAAAGAAGTCTTCCAGATCAAGTTT 360875 24 100.0 40 ........................ CTCTGATAGCTGCATAAGTATATAAGAAATAAGAAATTCT 360939 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== =============================================== ================== 111 24 100.0 41 GCTAATCTACTATAGAATTGAAAG # Left flank : TCAGACATGGACAAGCCTAGATATCTTCTGGGTTTTATTGGAGGCATATGATAATTCCAACCCCTTAGTTCCTCCTCTATAGGGTCAGAAGCCCTATAGGAGTGAAGCCTCCTAACCTGTCTAATTATCTGCGACCTCACATTATACATTATGCAAAAAGAATCTAAAATACACAATAATGATCCTTGTAAATTTCTTCCCGACTTTAGTAAGGATAATCTTAATAAACGACGATTTTCCTCTTGATGAAGAATAATGGAAAATATAGGGAAAGTGTTCTCCCGTATACGATCCTTGTTTTCCTTTTTCCTTGTTTCGTTTTGGGTTAGGTTGTTATCCTAAATTCATTATCTTTATGAAGAATTCCTTAAGATCCCGGGAAAACCCGGGAATAGTAAAAAAGATAAGAAAGAGTAATATAATACTAATCGAAGAGTAGAGAAGAAAAACTTATAAGAAAGGGAGAAGAAAAGATCAAATAGAGGGTTAAAAAACCCTCA # Right flank : GAAAATTTGTGACGGTGACTGTTTTGACGTCAGAGTGTTTACGCAGAAATGTAGATATTTGTCACCTTGATAATACAAAGCTGCAAATACTCTTCCGAATGTTACGTATGGGTCAAATTTCGAATAGCCTATATCCACTCGGGGGTAGATCTCATACCACGTCATTTCACTACCACCGCGACCAAAATTATTACTGCAAATAATATAATAAAGCCCTGGACGTATTTTTTAAATGCTGTGAACATGTGACTTGTTAGATATGTTATCACTATTGTAAGAAACAGTAACACTATAGGACTTAGTTCCATAGCTTCCTGATTATTTAACCCTAATGTTTGCAGGAAATTTACTATATGCATTAGAATCACGTTGTATGCTCTGTATAGGATATTTATTATATTAATAGAGTTAAGACTTATCATCAACCTAGTAATGAAAAAAGATTTAAATTTGGAGACATGGTGGAGTAGGGGCTAACTTTTCAGTCTTATTAGGAGCTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 3 362885-363102 **** Predicted by CRISPRDetect 2.4 *** >NC_021058.1 Sulfolobus islandicus LAL14/1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================== ================== 362885 24 100.0 39 ........................ AAAACTTCTTTCACATCATCAAGTGATCTCAGTCCTTTC 362948 24 100.0 42 ........................ ACTTTATATGCCGGTACTTTTAAACCAGAATTTTTAAATGCT 363014 24 100.0 41 ........................ GTAATTTATTATTAGTTAAAACGGGCTTAAGGCCAGGGGGA 363079 24 83.3 0 .....C...T.........T...A | ========== ====== ====== ====== ======================== ========================================== ================== 4 24 95.8 41 GCTAATCTACTATAGAATTGAAAG # Left flank : TAGCAATTCACGGCTTAATAAGAATAGAAAAATAAGAAAAAAAGTTAATTTATTTTTTATTTTTTAGGTGACGTCAGGGAATTGGTAGGTCTATTCAATCTCATATTCTGTCCGTAGTTTGGTCTGAGCATTGAAGGGCTTATTCCTAGCCTTCTTTGTAAGCTCATATCGAAATGCCTTGCAAACAATAAGGTATTCTGTTTTAACGCATCAACAAAAGCGTGGAACTTAGTTTCTTGTGCTATCACGTTCGCTGTTGCATTTGACTTAGCACCAGCTATATTGTTTCCTCCTATTCTTCCCTGAGAAACTGTAGTCCCTATTTTAACATTGTTAGGTGTTAATCTCAATCCAGTCCCGTATGTAGTATCTCCTATATTTAAGTTACTATTCGCTGGCTGCGGCTTAACCACTGGATTAGGACTGCTTATTTCTTTTGTAGCAAACCCTGAGGGTAATGCAGAACTTACTGTTCCAATAGGTGCCTGTGTCTGTAAACT # Right flank : ATATACCACAAACCTTGCTATCTATATTTGTTAACCTGAAACAGTTTCGCTATTTCAGCAATTCCCATTCCTTCTAAGTATTGCCCTAGTCTCGTTTAAATCCTTAGGCTTCTTGCTGATTAGCTTCTTTATTTCCCTTTTTAAGGCCCCTCAGTACGCTAAGCCCAACAGTCCCCCATTACTAACACCAGATTTATCCATTTTTAACTCGCGTTGCAGCTATTATGAATATGAAAAAGACTATAAAATTAGCAATATCTAAGACAATTTATCTATATGTGAACTACCACGCCCTAACGGACGTAGCTTCCTGCTTCATAGCCGAGGCTTGCCAAAGGTAGAGGTCTCAGCTCCACAGGCACTAAGGGTCGTTCCGACCCCGATCTACTCAGAATATTAAGAGAAGCATTATAATCACGGTCTACAGTCCAACCGCAGGAAGGACAGACAAACACACGGTCAGCCAAAGCCAAGTCCTTCTTAACGTAACCGCACCTAGC # Questionable array : NO Score: 8.65 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 4 575527-573686 **** Predicted by CRISPRDetect 2.4 *** >NC_021058.1 Sulfolobus islandicus LAL14/1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 575526 24 79.2 18 A....C..GG.............A TGAGGGCGAGAAGGATCA T,G [575504,575507] Deletion [575485] 575482 24 100.0 33 ........................ AAATGTCGGGCCAGTTGCTCAACAAAATTTCCA 575425 24 100.0 37 ........................ TTAGATATGCTTTATTTATTTCATCAGACATCTATTT 575364 24 100.0 35 ........................ ATTTGCCCTAGGTGCGTAATTGATTGTGTATGTAG 575305 24 100.0 34 ........................ ATTGACCTGATTATTCGCTCCATTTAGTAAGTAA 575247 24 100.0 33 ........................ TCCTTTATTGATTCGACCGCTACTACAGTACTC 575190 24 100.0 35 ........................ TATTAATTTAGGTACTGCAGTAAAGTTAGAATCGC 575131 24 100.0 35 ........................ TTCTCGACAAGCCTCATGATTCTCCCGTATGCGTA 575072 24 100.0 34 ........................ CATTTTGTAGCAGAGTTTGGATACAATAGTAGAG 575014 24 100.0 34 ........................ TTGCTATTTGAAATGTTTTTATTATGTATTCTAA 574956 24 100.0 34 ........................ GATTCTCGCAGGTGCGGACGATGTCAAAAGACAG 574898 24 100.0 35 ........................ ATTTTAGCTGATAACATTCCACAATCGCCTTTCGC 574839 24 100.0 37 ........................ ATATTTTTCCGTCCTTAGTTATTGCGATATCATGAAG 574778 24 100.0 35 ........................ CCACCAATTCTATTGTATCCGTGACTTTAATAATT 574719 24 100.0 35 ........................ GCTGATAGGCTGGCATATGTATATGCGTTGCTGAT 574660 24 100.0 37 ........................ TATCACATACCTTATAATCACTGGTCTTGAAACGGCT 574599 24 100.0 34 ........................ GGTACAAAAATATCATAATGAAAGCTGCTTATAT 574541 24 100.0 37 ........................ TTTGTGGAACATAATAAATTCCTCTAACTTCATTTAT 574480 24 100.0 33 ........................ GCTGTATTATCGGGAAGATCAAACAATATATTT 574423 24 100.0 37 ........................ TTCTTTTTGACTTACATTCATTTTTTATCCCCACTTT 574362 24 100.0 34 ........................ TCATGCTACCTCACCCAAACAAATGTATCAATTT 574304 24 100.0 35 ........................ TTTATTCCGTAAAATTCCATAAGTTCTTTTAATAT 574245 24 100.0 36 ........................ AAGGAGACCCTGGCGTTCTGTAAATAGTCAAGCAGT 574185 24 100.0 37 ........................ AGCCCTTGAGGCTAAGTGAAAGTGATTATAAAGAAAT 574124 24 100.0 36 ........................ ATAGAGCAATATGAAACTATCGTTTACTTCTCCAAT 574064 24 100.0 36 ........................ GCTGTTTATTCTCTTCCACCAACTTCCTCACCTGGA 574004 24 100.0 35 ........................ TTCAAAAAACTGATCTACAAATTTACTTAACTTTT 573945 24 100.0 35 ........................ ATTTCTTTATATTCTGCATTAATTGCGCCTAACGC 573886 24 100.0 36 ........................ TTTTTACGATACAACTTTTCGTCTGCCATTCATACT 573826 24 100.0 35 ........................ ATAATATGGCAAATTGGCACTAAAATATTGAGAAT 573767 24 100.0 34 ........................ GTTTTTACATATATAATCGGTGAAAGAAGAATGA 573709 24 83.3 0 ...................T.GCA | ========== ====== ====== ====== ======================== ===================================== ================== 32 24 98.8 35 GTAACAACACAAAGAAACTAAAAC # Left flank : TAATTCCTAATTTCTGATAAGATATAATTTTAAAGTTTCTTGTAACTTTAATAACATGTATAAGGTAAAAATTGATTTCATTAATAAATTATATTAGAGGCATAACAAACTCCTTGTAACATTCTTATGCCGATGAAATAGCTGCAAAAAGGTGGTAAAACAATCTTACCGTGCTCAATTATCCTGTAACCTTAGACAATTTAAGGAATTAAACTTTCCTTTTCCCATTATATTGATTCTCATTTAACTGGCTAAATATATAAAAATAATAATTGAGATATATATAATAATTCATTATTTATTTTTGTATTTATTCCGTTTTAATACTTGATTTAAACTAGAACTTGTTATTACTGATTTACAATTTTTTATTTATCATTATCAATTTTATCAATGCCTTAAATGAGTTATTTTTCCTTCTCCTTATTTCTTTCAATATTCAATAGGATTCCCTTAAATGAGTTAGGGTAAATTAATGAGTTTTAAGTTAGTAAAATTTT # Right flank : GTTGTTCTACTTTTCCTTGGTAATATAAAGTTCACGGTACTATCGATAAAGTTTTTAGATTTACGTTTGGTTGATTGAAAACTGTGAAGTCCGAGAAAGAGGCACCACATGCTAGCGCCTCTAACAAACCTACGGGGATAACGAGTCCAGTGCATCCCCCACGTCGAAGTCCTTGACGTTAACTTCCTTACCCCTAGGTACTCTGAAACTCTTCTTAACAACGCCCTTGTAAACACCATCCTTTATAACGTGATAACAAATGCTGGCAAGCTTTCCAGCAAGAGCACAAGTAGCTTGTTTAACACTCTTACCCCTAGCAATAAGCCTCTCATAATACCCGTTAAAAGGCTCAAGATCCCTAGCAACCCTAGAAACCAGGTAGAGAACCCTACGCAAATACTTATTACCCCTAATCATACCAGAGTGGGACTCGCTATCACCACTCTGCTTAGTTTTAGGGGCGAAACCAGCATAAGCCCTAGCAGCCTTAGAACTGGAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAACACAAAGAAACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 5 584662-586213 **** Predicted by CRISPRDetect 2.4 *** >NC_021058.1 Sulfolobus islandicus LAL14/1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ====================================== ================== 584662 24 100.0 35 ........................ ATACACAAAATTCTATTGAAATTAGCAGAAAGGAA 584721 24 100.0 38 ........................ AAGCAGATATTCCTGAAAGTATGTATATAAAGTTAGAA 584783 24 100.0 36 ........................ TTTCTATTTTTCAAATTTAAAACCATATCTATTTAT 584843 24 100.0 35 ........................ ATCGAGTTGAGATGAAAATATTTCCAACAGGTTAT 584902 24 100.0 34 ........................ TGAAAAGGATGCAAAAAAATATCAACCATATGCA 584960 24 100.0 35 ........................ TTGACTTTCATTTATTTGGGCTTTCATTTTTTATT 585019 24 100.0 34 ........................ ATATACTGATATTAGCATTGAGGTCGAACAAGGT 585077 24 100.0 35 ........................ CCTGAACTGTTCTGGCGTTCCTTGGCGTAAATTTA 585136 24 100.0 36 ........................ TAGGAGTTGAAGTAGCAGAAACTGATAAAATTGCAA 585196 24 100.0 35 ........................ CGAATGGTGGGAATATGAAGACCAATATTTAAAAT 585255 24 100.0 35 ........................ AAGGGGCAAGTAACCAGGTCAACAATTTCATTAAT 585314 24 100.0 35 ........................ AAGGGAAGTTCATAAGACGAATGGAAGACTGGGCT 585373 24 100.0 36 ........................ ATTAGAAGCGCCTATCGCCATCAGCAGATTTGTTTT 585433 24 100.0 35 ........................ AATCGACATTAATAGGATAAGGATGACTAAAAAGT 585492 24 100.0 36 ........................ GGGGTTCAGAAGCGGTAGCTGGACTTTTCCATTCGA 585552 24 100.0 35 ........................ AAACTTAGCTTGCCATTTCGCGTACCTTTGCGAAT 585611 24 100.0 35 ........................ TGAATAACTGTCAATAATTGAAAGAACTGCTACAA 585670 24 100.0 35 ........................ TACAAATTAGTTTATCGACAGTTCCATCTCCACTT 585729 24 100.0 37 ........................ TTTGTTGTCGGAGACGTAAGGATCGACGGAACACTTT 585790 24 100.0 36 ........................ TTTTGCAAATTATAGTTATGGACAATTATTATTTAT 585850 24 100.0 36 ........................ AGAACAAAAGAAAAAATCAAATTTGAATACAGAATT 585910 24 100.0 36 ........................ CCCACCCCACCCCCCCACCCCCAATTTTGCCTTGGA 585970 24 100.0 36 ........................ TTTAATATCAACGTGCCCCTTTGGCAAATCACATTA 586030 24 100.0 35 ........................ TTTTCAGTTCTATAACAATATTTCTTCTTACTGAA 586089 24 100.0 33 ........................ ATGTTTTTATAATGAATTATATGATTTTTAATT 586146 24 100.0 18 ........................ TGATCCTTCTCGCCCTCA Deletion [586188] 586188 24 79.2 0 T.............CC..G....T | A,C [586191,586194] ========== ====== ====== ====== ======================== ====================================== ================== 27 24 99.2 35 GTTTTAGTTTCTTTGTGTTGTTAC # Left flank : ATTAAATAAGTCAACAACCGTGTTTATTAAATATCTAGATGTCAAGTATACATAACCTTTATCAAGGCTTGGAACGGGGATTGCTATTGGGTAAAGATCACTTATGCTAATTATTGAAGTAACGTCAGTTTCTTCTTCACCACCAAAGAGGCAACAGCATACATTAGCTTTACTACAATCTATTCTGCCATTATTATTTATCGCATTATAAACAGTTCCACAATATTGCTTTAACGCTCCCTTAAAGGTTGAGGAAAAAATTATAGGAAAACCTTGAGGATCCCTTTGGATAGGTAAATCCACTACTCCGCTAGATCTACCCATTCCCACATGTAAAGAAGTTATGGCATAAACCACAAACGGAATTCCCTTCATAGTAAATAGTGAATTTTGGTATATAATAAGCTTTACGAACTATATTACATTCAATTTCACAACATATTTAATATAACACCCTTTCTACAAGATTAAAAAGTATAGAGTTTTGAAATATATACTAA # Right flank : TAAAATTTTACTAACTTAAAACTCATTAATTTCCCCTAACTCATTTAAGGGAATCCTATTGAATATTGAAAGAAATAAGGGGAAGGAAAAAATAACTCATTTAAGGCATTGATAAAATTGATAATGATAAATAAAAATACTAAATACTCTACTGAAGAAACTTTAATGCTTATTAATAATTTACACTTACTATATGATCGCATAGAAGTGAACGCTCAACGAAACGCGTAAGTAATAGAAAAATTAAAGAAGCGCCGTATTTTAGTTCTTCATTCATATTCTTCACGTAATAGCTAAAAATTAAAGAAAGAGAAGAGCAGTATCAATGAAAGACAGGGATTGTGAAGAGAGAGGCAAATTATTTATTACTTATAGAATAGATAAGAATTCCATTCAAATTTAGCCATATATCCTAATAATCTCTAACACGGTCTACAATTTCTATTCGAAATTTTTTATACTTGAATGTACTATATACTTTAGTGTTTTATAATGAAATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTTTCTTTGTGTTGTTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 6 597345-599148 **** Predicted by CRISPRDetect 2.4 *** >NC_021058.1 Sulfolobus islandicus LAL14/1, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================= ================== 597345 24 79.2 18 A....C..GG.............A TGAGGGCGAGAAGGATCA G,T [597362,597365] Deletion [597387] 597389 24 100.0 37 ........................ AAAAAGTCATTCTTTTTTTTATAATCCAAGAGATAAT 597450 24 100.0 38 ........................ ATAATCAGAAATCATAAAATAGAGAAAAATGCAAACTC 597512 24 100.0 35 ........................ TGGATTACCATTTTTCCACCTCTATTCTCTATAAA 597571 24 100.0 36 ........................ TAGAGTTAAGGTCGCATGACAATAACATAATAATTG 597631 24 100.0 35 ........................ AACGTTAATAGAGACACTTGGGTCTTATTTTCACA 597690 24 100.0 39 ........................ AAAATTTAGAAAGTAGGAGAAAAGAACAATCTATAGAGT 597753 24 100.0 33 ........................ ACTGGAGCTTTTGCAATAACTTTTCCATAAAAT 597810 24 100.0 37 ........................ ATGAATTTTATGAGTTGACAAAAGATAAAAAATTTTT 597871 24 100.0 35 ........................ TTAAAATACTCATCAAATGTAAGGTATTTTATAAC 597930 24 100.0 37 ........................ TAAAAGTTCCGTGTTTTTGCAGCAGCGTGAAATTTTA 597991 24 100.0 36 ........................ AATCTCTCTTTTTTGACCATTTTCATCATAATAAAT 598051 24 100.0 35 ........................ CAACAATATATTTTGAATGGAGCTAAGGTAATCGC 598110 24 100.0 36 ........................ TAATGTAAATGCCAGCTTTGTTTCACCAGATACCTT 598170 24 100.0 34 ........................ TTATTTGTCAGTAGCAAGCGGAAGTAAGGCAAAG 598228 24 100.0 36 ........................ ACAAAAAGGAGTTACGTTAGCAAAAGAAGACTAGAA 598288 24 100.0 35 ........................ ATGTCTATGCTTGGGCTACTGGAAAATGCACAGTT 598347 24 100.0 34 ........................ ATAGTGATTGTGGCTTCATCAGAAAGATTAAGAT 598405 24 100.0 36 ........................ TTCGCTATTATTAGCGTTATACCTAGCGAAAAAACT 598465 24 100.0 36 ........................ TTTTTTGTTTCTTGTTTTGTCATTTATTTTTACCCC 598525 24 100.0 36 ........................ AGCCCTCACCAGAGTGATGATTAGCGAAAGAACCAT 598585 24 100.0 36 ........................ TCTTCGTCAAAAAAATAATATGTTCTTATTTGATCT 598645 24 100.0 38 ........................ AATTGGTGGATTAATCAACCTAAGTCGCAAAATCAATC 598707 24 100.0 35 ........................ ACCGTATAGTGTCACTATTTCCCCATAGTCGTCAT 598766 24 100.0 36 ........................ TATGCTTTTGAATGTCTGTTCTTCTGAATTCGATAT 598826 24 100.0 37 ........................ AAAAGAAAAACTTAAAAAGAAGAAGAAAATAAAAAAG 598887 24 100.0 35 ........................ TAATTTTTTCTGCTATGGCGGAACTCATGCATACA 598946 24 100.0 35 ........................ TCTTCTTTCATACAAAGGAATTTTCTGTTCTTCTT 599005 24 100.0 34 ........................ AACACCCTAGGTTCCCTTAGCACCTCAGGTTGTT 599063 24 100.0 38 ........................ AAAAAAGATTAACCTGGAAACAATTCCGCAAGAACCTT 599125 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ======================================= ================== 31 24 99.3 35 GTAACAACACAAAGAAACTAAAAC # Left flank : GAGAAATCTCTAATTTCATTTTTACAAATGGAACATAACACGAGTTAATACTCAACCAAGTTATGATAATCAAAAAGTACATTGCTAATAAGTGAGACTAAGATGCATACATTGTAATAATGAAGAAGTCTCTAGCAAGTAGTTTAATCTCTCAACGCTCTAGAATTGATAAACATACAAATAAATCTCTGGCAATTAGTTATTGACAAAGGTTCGTTGCCAATAGAGTACAAGCGCGTTGAACTAGAATAAACTCAGAAAAGCCTTATATGTATAAAGTTCTCTCTATTTTCTTTTTTATAATTTTAACTGCGCATTGAAGTTACTCAGCCATTTAAGAACAACAACTAAAGTCGTTTTCAATTTTTTATTTATCATTATCAATTTTATCAATGCCTTAAATGAGTTATTTTTTCCTTCCCCTTATTTCTTTCAATATTCAATAGGATTCCCTTAAATGAGTTAGGGGAAATTAATGAGTTTTAAGTTAGTAAAATTTT # Right flank : CTATGTTCTTTAGTGTGAAAAATAGCGAGGTAGTTCCAGAGTTACCTCCCAACGCTGTGAAGTTGTTTAAAGGTTACGTGGATTATAGGTTCGGAATCCCCCTTTCTGAGGAAGTTGAGGTCTACAAGCGTGGGAAGGAGTTATTTACGAGGTCATCGCACAGTGTTATAAAATATGAAATAGCGGAATTTCTAAACCTTTACTTGGTCTACTCGTTGTTATATATTACTTATGAACATAATAACGGTGAATCAGGGAAATATAAGATCTCGGTGGAACATATAGAGTGTGGACAACAATTTTGTTAATTCAGTATAAATTGTATAAAGTATAAATTTATTTTCAATTCACCACAAGATTTATCAGTTAATAAAATATAATATTGTAATTTTAACCATGTTCAAAAGTTTTATTGTAAATCAGAGAGTTTAAATGATATAACTTTAAGGAAATTTTAACCAAATTTCAAATGAACGAAATTGTTGCCCACACTCAACATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAACACAAAGAAACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //