Array 1 218475-221480 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGFBC010000001.1 Schleiferilactobacillus harbinensis strain HUL 20 HUL_20_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 218475 36 100.0 30 .................................... GGAAGGACTCGGGCACTGCGAGCTCAGTAG 218541 36 100.0 30 .................................... AATGGCATTGATATATCTATCGCCAACGAA 218607 36 100.0 30 .................................... GGTAGTTGTGCAATTGATCATTCGTTAATT 218673 36 100.0 30 .................................... CGGCAGCATTTGAGCGTTGAACGATACAAA 218739 36 100.0 30 .................................... GGGTAGGTGTGGAGATTTTTTGCGATCTTT 218805 36 100.0 30 .................................... TTTGGTTAGTGCTACTCGCAATTCGTCTGT 218871 36 100.0 30 .................................... CGCGAGCACTTTGTGTTTGGCATTATCAAA 218937 36 100.0 30 .................................... GACCGTGTTGTTACGCAGCAGCGTGTTGTA 219003 36 100.0 30 .................................... GGAAAGAGTTTTCGACCCTGAAACGCTGAA 219069 36 100.0 30 .................................... GGTAGTAACCCACGAAGAACGTGTTACAGA 219135 36 100.0 30 .................................... AGTCGCTGCGCGTGGATTACACGCCGATTG 219201 36 100.0 30 .................................... AGATGATCACATCGCCTTCGAAATCTTGCA 219267 36 100.0 30 .................................... TACGTGTTGCGCATCAAGACGTTCTGTACG 219333 36 100.0 30 .................................... GCACAATGCCGATTATGTCGAGGTGAGGGG 219399 36 100.0 30 .................................... ACAGCATGGCAACGCCGTTGTCTGTGACAT 219465 36 100.0 30 .................................... AACGGCCAGCGAAGGCGTCACCACCGTGTA 219531 36 100.0 30 .................................... AACACCAATCTGCTGGCCTACGCCGACAAG 219597 36 100.0 30 .................................... CATTGCCTTTAAGAACAACAACGCCGAGTA 219663 36 100.0 30 .................................... CCTTTGTCGGGGTTTACGATTTGATTGACG 219729 36 97.2 30 ...................................T ATAGAACCTCTACTAAGCTCCGTTGGTTGA 219795 36 100.0 30 .................................... AGTAGTCGTAGTAGTAGTCAAACTCTCTGC 219861 36 100.0 30 .................................... CGTCGGGATATTACGACAACGACCCATACA 219927 36 100.0 30 .................................... CAGTTGCTAAAGATGTATCTGATGCGCTTG 219993 36 100.0 30 .................................... AACGGTGGCCAACGAAAATAATGATCATCA 220059 36 100.0 30 .................................... GGTCGAGTATAGGGAAAGATGGGCGGTCCA 220125 36 100.0 30 .................................... CAATGTCGGGTCCGATTCCCGGCCGCCGTA 220191 36 100.0 30 .................................... GTGAGCGTATTGGTGCTTCAGCACGAGATA 220257 36 100.0 30 .................................... AGAACATGCCAGTCAGACGATCTTGAATAT 220323 36 100.0 30 .................................... TGCCTAGGCGCCGGGGCGGTACCGGCGGCG 220389 36 100.0 30 .................................... AGGTTCCTCAGTAACATTATCAATCCCAAT 220455 36 100.0 30 .................................... GCTCGACGCGAAGGCTTTAGCTCAATCCGT 220521 36 100.0 30 .................................... CAAATACCACCGGGGTGCTGACCTGGATCA 220587 36 100.0 30 .................................... GGATCGGATTCAAATGTAATCGGAGTACAA 220653 36 100.0 30 .................................... CACTGGATGAGTGGAGCTGCTGCCATTTGA 220719 36 100.0 30 .................................... GCGAGTGGATGTCATCAACCACGATGCGGG 220785 36 100.0 30 .................................... AGATGATCACATCGCCTTCGAAATCTTGCA 220851 36 100.0 30 .................................... TACGTGTTGCGCATCAAGACGTTCTGTACG 220917 36 100.0 30 .................................... GCACAATGCCGATTATGTCGAGGTGAGGGG 220983 36 100.0 30 .................................... ACAGCATGGCAACGCCGTTGTCTGTGACAT 221049 36 100.0 30 .................................... AACGGCCAGCGAAGGCGTCACCACCGTGTA 221115 36 100.0 30 .................................... CGAAGTGTACGTGGAGAATTGGGACAACTT 221181 36 100.0 30 .................................... ATGTGAGCTACGAAGTCCAGGAGCCCGACA 221247 36 100.0 30 .................................... CGTGTCTTGGTATTACGGGCTGGCAAAAAA 221313 36 100.0 30 .................................... GAACGAGGGGCAACTGGGCGGCCAGGCTTC 221379 36 100.0 30 .................................... CATCAAGATCATGCCCAACGCTAAGGAAAT 221445 36 94.4 0 .......................G.........G.. | ========== ====== ====== ====== ==================================== ============================== ================== 46 36 99.8 30 GTCCCATTTTAGCCGATTCTGGAAGGATCCAATAGC # Left flank : TAACGGCTCGTTCCAGACGGTACGCAACGCAATTCATTTGACGATTGAAAGTATCGGCACAGCCTTTACCCAGGAAAAAGTATCTGGAGTCATTCTCCCTCAAGTGATTCCTTTGGTCCCCCATGGATTCGCCTAGATTTATGCGAGTGATCGTAATGTTTGACTTGCCCGTTGTAGAAGTTGCGGATCGAAAAGCAGCTAATCAATTCCGTCATGACCTTATCGCTGAGGGATTCGTCATGATGCAGTATTCGGTCTATTATCGGATCGTTAATGGCCTAGACATGGCTACAAAATACGAAAAACGACTTGAGGGCTACTTGCCAGAGAAAGGACAAGTCCGTTCCCTAGTTTTGACAGAAAAGCAATTTGCGCATATGAAAGTATTGGTTGGAGACGTCAGTCCGCAAGAAACAAACATCTCAGGTGACTCACTGACCAGTTTATAGACAAGCAAAGAGGGCGCAAACTGCGAGGTTACGCCCTCTTTGCTTGTGACT # Right flank : CTATTGCTGTGCTGATTTTGAGAATGATTAACGTTGGCGATGAGTGCGGGCAAGGAGCAGCGAGATGACTGCTTGTGCCGCACAGAAAAAGTGGCAGCCGGATCAGCGCGCACGGAAATTTTCGAGGGTTGAAATTTTGCGGCGAGATTTTTGAAATGAAAACGACAAAATTTATTTTCAGAAAGAGCAAATTAATTGCAAGAAACTGATATGCCAGATTTCTGTGACGGTTGCTGCTACTTGCGATGTATCTGATCCAATGACGCCCATGGCACACCATAATTTGCAACGTTGATATTTTCTTGCAAAATTCGATTTGCTTCCGCGTTGCTTTTCTGCTTTTCTGGTGTATTGTTTTCATAATACAAACACTGCGTAACAAACAACAAAAAACCAACCGTTGCTGTAATCGCAATACCTGCCAGCATATAATCATTCATCCAAATCACTCTTTTCCTAGACGCACGGGCACGCCGCGTATTATTTCAATACTGTATTTC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCATTTTAGCCGATTCTGGAAGGATCCAATAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.60,-3.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //