Array 1 40960-39133 **** Predicted by CRISPRDetect 2.4 *** >NC_016799.1 Corynebacterium diphtheriae 31A, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 40959 36 100.0 28 .................................... AAAATTCCCATGCACAACAGCATGAATT 40895 36 100.0 28 .................................... AAAATTCCCATGCACAACAGCATGAATT 40831 36 100.0 28 .................................... CAACTGGTTATGTGTTCACTGGCCCAGT 40767 36 100.0 28 .................................... ATGGCCACACTGCTATGGTGCTGCAGGA 40703 36 100.0 28 .................................... TATCCCCAGCGAACTCCTCCATGCGGGA 40639 36 100.0 28 .................................... TTCGGGACGTCGAACCGGCTGCAGGAGA 40575 36 100.0 28 .................................... ATCGTGAATTTCGCAGCAATTTTGTCCG 40511 36 100.0 28 .................................... ATCGCAGACGCAGGACTACTAGCAGACA 40447 36 100.0 28 .................................... GATAGTACGCACAAGGTATGCATGAAAG 40383 36 100.0 28 .................................... GCTGGGAGTCGCAGAGCATCGGGTGGCA 40319 36 100.0 28 .................................... TCACCGAATACATCCTCAACCACTACGG 40255 36 100.0 28 .................................... AAAAGCCGCGCATAGGTATCCGTTTCCT 40191 36 100.0 28 .................................... TTACAACAACACGGGCGATGACACCCTC 40127 36 100.0 28 .................................... AGCAGGCCGGTGAATGGGTCATCGCCAA 40063 36 100.0 28 .................................... ATACCACCAAGGACACCACCAAGGCCTT 39999 36 100.0 28 .................................... GATCATTCGCATGAATCCACAGATGACA 39935 36 100.0 28 .................................... GGAACGGGCGATAAATTCGGAGCCTAGG 39871 36 100.0 27 .................................... GGCTTGCGCTGCAATGCCGGCGATCTT 39808 36 100.0 28 .................................... GCGGCATGCCATAGTCCACCTTTTTGGA 39744 36 100.0 28 .................................... TCGAGGCGCAAGGAAAAGTAAACCTGAT 39680 36 100.0 28 .................................... GATCGTGACGTGGAAGAAGCAGCACTCT 39616 36 100.0 28 .................................... TTGCTAGGAAACTCGGCACCACAAGCAG 39552 36 100.0 28 .................................... GCCCACCCACGCGGCGTACATGCTCATC 39488 36 100.0 28 .................................... CCAGCAAGCCCATTAATGGTATCGGTGG 39424 36 100.0 28 .................................... CGCGACAAGCGGGGCGGCGATTACTGCA 39360 36 100.0 28 .................................... CACCCTACGACATCGCCATCAAAGACAT 39296 36 100.0 28 .................................... GACAGGGAGATATCCGAAGCGCTGTCAA 39232 36 100.0 28 .................................... AGCCCAGTAGCCCCAAGACGACCGAGGG 39168 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 29 36 100.0 28 GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC # Left flank : ACACCATTACTTCATCAAGTACTGCGTCAGTGACCGCGGAAATCGTCTCATGGGAGATGTCCACCCGCATAACAGTGACCATATGGTGCCTGATATCGCGCACGGTCATCCCACTGGCATACAAGCTCACGATCATGTCATCGACATCCGTTAAACGCCTCGAGCCTTTCGGGACCATGGTGGGAATATACGTCCCAGCTCTATCCTTGGGGACGTCTACGGTAACTGGCCCGTCGTTGGGATCAACAGTCTTTAGGTAGGTGCCGTTGCGATAATTGTAGATCCCAGCAGCAGCTTTAGCTTCGCGATTTCAGCATGAGCAAGCAGCTTTTCCTCAGGTCGCGTCAATCTTGGCCTTATCAGCCGAGTCTCGTCTTACCACAGTAGTCATTCTGACTTATCTCCTTATGCGGAATAGAATCCCAAACACAAACCATCAGGCACCCTCATTCCCAAAAACCCTGATAAACTTCTCCTACGGTTCATCCCCGCTGGTGCGG # Right flank : AGGTAGCCCAAAAAATCCTGTTTAACATGGTTTTTTGGGCTACCTGAAGTCTAAAAAATCGCGAGTTGATCAGGCTTTTCTTCGCCAGAAACCTCTGCAGAAGAAGAAAAACGGATCATCTTCGACCATTGGATGTCCGATACCGAAAGGATTCGAACATCCCCACCTGGGGGTAATTTTTCTTTAATTAATTTCACCAAATTAGATAACTTTGCGGCCAGAGGCAGGTACTGCACATATACACTCAGCTGTGCCATACAGAATCCAAGATCTAAAAGATTCTGACGAAACGCCGTTGCTTGCTTTCGCTGAGTCTTTGTCTTCACCGGAAGATCAAACATCACCACACACCACACCGGATCGCTACCTTTCTTCGGCATCGAAGGGACCTTCCCAAATAGGCGGTACTAATTTCTCAACATCACCTTCCACATACCGCCCATACTGTTGAGCGAACGCGGTAAAAACCGTCGGAATTGACTGCCCCGCAGAATTGAAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: R [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //