Array 1 343-735 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQIR01000497.1 Streptomyces sp. WAC04770 AA000317-256_WAC04770, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 343 29 100.0 32 ............................. GCTGCGGAGACGTTGCAGAAGGGCATGCGGGT 404 29 100.0 32 ............................. AGCTTCGACAGCTACATGTTCCAGCAACTGGA 465 29 100.0 32 ............................. TGCTCGGTCGCCGTACGGGCGTGACGCAGCAG 526 29 100.0 31 ............................. CAGACGGGCATCGCAGAGGCTTTCGACCGTG 586 29 100.0 32 ............................. CGCCGGACCCGGACGTTGAAAGAGGCCCTTGA 647 29 96.6 32 .....................G....... GCCGACAACCTCACGGAAGCGAATCTCTGTCG 708 28 86.2 0 ..G..................G.-A.... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 97.5 32 GTCGTCCCCGCGCACGCGGGGATGTTCCC # Left flank : AGATGTGTATAAGAGACAGCTGCCGCCCCTGCCGCGAATCCCACAGCAACGAGACCGGGAACTCTCCGACCGCCCCCACCGCAGCACCGGACATCAAGACCCACATGGCCAACCTCCGCAACCTCCTCAAACCCGTCTGAGGCGGGCGACGGCGGATCGGCATCGATCGGGCGGCCTCTCATCCGGGGAACGAGCCGCCAACCTCGGTCAACAAGGGCAGAATCTCCCCAGGCAGGCCCAGAGTCCGGAAACGGCCGCCTGCACAGCGAGGGAGATATGTCCGTTTCTCAAGAAGCAAGTAAAAACGAGCCGCACGCCGCATAAAACCGCAGGTCACGAACTG # Right flank : CTCTTAACCTCCGTCAGCAGCTAGGCGAGGCGGCCGCCGTACCGGTGCCAGGCGTAGTACATCCCGCGAGGGGCGGACGAGGACCCCTCCGCGTCTTGTCCGGGCAGTCCGCGAGGTCCGCTGAGTCCGGGCTACAGCACCTCGCCGGGAATCGAAAGATAGGCCTCGCGGAGGCGGTCCAGCAGCGGGTGTTCGGCGGCGAACTCGGTGCCGTCGATGGCCGACAGGGGGCGGACGCCGATGCCCGCATTCGTCGCGAAGGCGGCCTCCATCACGCGGGCGTCCTCCAACGTCAGGTCCGCGTCGCGGTGTTGGGCGGGCGGTGGCACGTGCTCGCGCAGCAGGGCCGTCGTCACGCCGGGCAGTACGCCGGATCGTGGCCACAGCACGGTGCCGTCCCGGTCGATGAAGCCGACGTTCCAGGTGGCGCCCTCGGTCACGTACCCGTCGCGGCCCACGAACAGCGCGTCGTCGTAACCGGCGAGCTGCGCCGCGCGCCG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCACGCGGGGATGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 6122-6513 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQIR01001629.1 Streptomyces sp. WAC04770 AA000317-279_WAC04770, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6122 29 96.6 32 ............................T CCCGCAGCGAGAACCGCGTCCAGATGTCCCCG 6183 29 100.0 32 ............................. TGGTGGCATGAGTTGGACCCGCTCAACCCGGT 6244 29 100.0 32 ............................. CGTCGCCTTCGAGCTGGGCATCACCGCCCTCA 6305 29 96.6 31 .........................C... CGGCCGTGCGGGACCAGACGGCGGACCGCAG 6365 29 100.0 32 ............................. TGGGCGAGCAGCTTCGCGAGCCGCATCTCGCG 6426 29 96.6 30 ............................G GTCGTCGACCAGGACCCGCAGACCGGCCGC 6485 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 98.5 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : TGCCGGATGAAGAAATCGCCTTGCGACTCGTCGAGTTGCCGGGCTGGGAGCGTGATGGGGACACGATCACCCGCACGTTCGCGATCCGCTACCACGGTGGCGTCGCCATGATCGTGAACGTCGCGGACGTCGAAAGACTCATCGGTCACCACGCGGACATCGACCTGCGCTGGGACCACGTACGGTTTCGCATCACGACACATGACGCCGGACACCGCCTCACCACCGCCGACTTCGACCTGGCCGCCCGGATCGACCGCATCGCTACGGCACACGAGGCACAGCCGCACAACTCTTGATCAAGGCACCCGGGTTGCAACCGCAGCGTTTGGTGAACGGCCTTCGGCGGTGAAGATGCGGCACTGTGGGGGTGCAGCCGAGTAAGGAGCCCGTTCGCTGTGTTCACTCTTGGATCACCTACGACAAGGGGAGATATGTCCGTTCCTCTGGAAGTAAGTAAAAACAGCCCCTCAGCAACATAAAGCTGCAGGTCACGAACT # Right flank : ACCTGGACGTACGCCGTGACGCTGCTCGGCGGGTGGTCCCCGTGTACGCGGGGGATCCCCGCCTTGCCCGTCTCTTGGGTCCCGAGCCTCGGGCTTCGAGGGCCGGTCCGTTCACTCTTTCTCGTGTACGGGTACGGGCGTGGCCCGAAGCTTGGACTCCGAGACACGGGTGTCGGGACACGAGGCCCGGGATTCGAGCGCCTTCTTTAACCGGTAGGTAAGAGAGGGGGTTTGGGAAAACCTCCCCACCTCCCCCTGTCTCTTATACACATCTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 226-745 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQIR01001222.1 Streptomyces sp. WAC04770 AA000317-454_WAC04770, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 226 29 100.0 32 ............................. TCCTCGCACCCCGCACGGAGCCCCGATGACCA 287 29 100.0 32 ............................. GCGACTTCGTCCACGGCCCCGATGGACAGGAG 348 29 100.0 32 ............................. GAGCTGCGCTACAGCCTGGACTGGGTGATCGA 409 29 100.0 32 ............................. TTCGCCCCGGCGTTGTCCCGCAGGGCGTCCCC 470 29 100.0 32 ............................. ATCACGACGAACTCTCAGGACCCGCGTGTCCT 531 29 100.0 32 ............................. GTGCTCGGCTGTCGGTGCGTGGTGTGTACGTG 592 29 100.0 32 ............................. GCCGCTACCGCGGAGCCACCGCCATAGACCTG GGG [614] 656 29 100.0 32 ............................. TACGACTACAAGAATCGGCTCGGCCGGTATCA 717 29 89.7 0 ........T...TA............... | ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.9 32 ATGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GGCGAAGGGGGCTGAATTGTGGGCGGTGGTACGTCGAGCTTGCGGCTGCGGTAGCGGGGGCGCGGCCCGAGGCTCATCCGGCGGGGTGGACAGCGTGCTCACGACCGGAACAATGGGGACTCGGCTCGCACCTCGGGCCGCCGATGAAGCGAGGTCGATATGTCCGTTTCCCAGGAAGTGGTGGAAAACAGCACCTCGGCCGCATAAACCCGCAGGTCAGGAACTA # Right flank : CCCGTCCGCGACGTAGTCCGCGACAACGCCCATACGATCCCCGGGCGTGCGGGGGGACCTCGGCGGAGCCGACGAACGCCCCCATGCGCTCGTTCCCCAGGGCGTGCGCACCCTCCGAGGCACCGCGAAGGACGGCCGGCGGAGGATGCGCACAGCCCCGGACCTGGCGGCGGCAGCCGGCGCTCGGTGCAGGCGCTCAGTGGCCGTACGCCCCGCACAGGCCCCGGCCGCCGTCTTCCGCCGCTACCGTCCCGCAGCGTTACGGAGGTCACGCTCGCGGCGCATACTCCGCGAGGGCGAGCGCGCAGTGAACGGTACGGCCGTCCTCGCTGACTCCCCACGCGTCGGCCAGCGCCTCCACGATGCCCAGTCCGCGACCGCCCTCCGAGGTCTCGTCCACGGCCCGGAGCACAGGACGCACGGGAGAGCTGTCCTCCACCCACATCGTCAGATACGTGACGTCGGCGCACCAGGTGACGGTGATGTCCTCTCCGCCTCCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched ATGGTCCCCGCGCATGCGGGGGTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 322-899 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQIR01000323.1 Streptomyces sp. WAC04770 AA000317-493_WAC04770, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 322 29 100.0 32 ............................. GCGTCGATGAGGCGCAGGAGTTGCTCGCGCTG 383 29 100.0 32 ............................. CGCATTCTCACCGTCCGCGCAACCCGGGCCGG 444 29 100.0 32 ............................. ATGCAGCCCGTGAGTAGCACCGAGGCGACCGA 505 29 96.6 32 ............................T GGCAGTTCCGCGAACGGCTCCGGGAACCTGAG 566 29 100.0 32 ............................. CCGGCAGCGAACCGGTGGTTGACCTCGGTGAT 627 29 93.1 32 ...................AA........ GCCTCGCCGGAGACCGACCTCCAGACCCCGAA 688 29 100.0 32 ............................. ATCGCCCTGGACGGCGCCCGAGCGGCGCTAGC 749 29 100.0 32 ............................. TGGCCGATGGAGGAGGGCGACAGCGCCGTGCA 810 29 96.6 32 ..............C.............. GGGGCGTAGCCGACGCGGACGGTCTTGTCCCG 871 29 93.1 0 .............A..........A.... | ========== ====== ====== ====== ============================= ================================ ================== 10 29 97.9 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CTCCCCGACGGCCTCTGCCGCCCCTGCCGCCAAACCCGCGACACCAGCCCTGGGAACCCGCCACCCACCCTGGCCACGCCACCCGACATCAAGACCCACATGGCCAACCTCCGCAACCTCCTCAAGCCCGTCTGAACCAGACGCTCACCGTGCTGCTTGGCCTCAGGGAAACGAGGGACGGTCTCAGCAGCCAGGAGGCAGAATTGCATTTGACAGACGAGCAGCCGACCAGCGACGGCCCGTGCGGCGGGGAGAAATGTCCGTTTCTCAAGAAGTATGCAAAAACAGCACCCCGGCCGGATAAACCGCAGGTCACGAACTG # Right flank : AGTGGCCAGCTGACCGTAGTCGAGGCCTGTTCGTGGTCCCCGCCCTGTCTCTTATACACATCTC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 11421-10894 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQIR01001204.1 Streptomyces sp. WAC04770 AA000317-643_WAC04770, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 11420 29 100.0 32 ............................. GACGTCAACGCAGGTCAGGTCGACACTAGGCC 11359 29 100.0 32 ............................. TCGATGAACCGACCAGGTTCTCCTTCTCCGAA 11298 29 100.0 41 ............................. ACTCCACGTCGACATCGCGGGCCTCCTCCAGGTGGATGATG 11228 29 100.0 32 ............................. ACCTCCGCGCACACAGAGAAAGGCGCCCGACC 11167 29 100.0 32 ............................. CGGCAGGGGCGTTGTGCTGCCTCAGGCCGCCC 11106 29 100.0 32 ............................. GTGTCACCCATGGCGGGCCTCCAGCGGGGTCG 11045 29 100.0 32 ............................. AGGACGTCGATATCGACACGGAGCTCTCTGGC 10984 29 93.1 32 .....................G...T... GACCTCTGGGAGGACAACCTGTGTCGGTGGCC 10923 29 86.2 0 A...........A...........C...T | C [10897] ========== ====== ====== ====== ============================= ========================================= ================== 9 29 97.7 33 GTGGTCCCCGCGCACGCGGGGATGGACCC # Left flank : CCCCAGCCCCGCAGCTCCCTCCGGCCGCGTCCTGGTGGAATGCACGGAGTGCGGCACCCCGGGCCCCTCCGAGGCCCTGCCCGACGGCCTCTGCCGCCCCTGCCGCGAAACCTGCGCCACCGGGCCCGGCGACCCGACACCCACCCTGCCCGCACCACCGGACATCAAGACCCACATGGCCAACCTCCGCAACCTCCTCAAGCCCGTCTGAACCGGACGGCGCCCTATTCAGGGGAACGGGTGTCGGCCTTGGTGACCCAGGGGCAGAATCGCCTCTGGCAGGGCGAGCAGCCGACCCAACGACGATCAACACGGTGGGGGATATGTCCGTTTCTCAAGAAGTGAGTAAAAACAGCACCCCGGCCGGATAAACCCGCAGGTCACGAAC # Right flank : CAACGAAGCTGGGCTCCTGCCGGTCGCGGCCCTCGGCGGATGGCGGCCGTTGGACAGTGTCCGGCCGATCACGACGGCCCGCGGAGAGTCGGGCCGCACTTGCCTGACCACCAGCCGTCACGGCACGGATACGGCGCCCGTATCATCCCGCCATGATCATGCTATCTGTTGACCCTGCCTCGCGAAGCTACGCCGACGGCCAGGCCGTGGGGCAGCTTCTGGTTCTCGCCGTTGCTCTGGTCCTTGTCTGGGTCGTCACCCGGACCTGGCGGCGAGGTCCGGCCCCGGACGGTCCGGACGACGTGGAGAGAACCACCGCCATCGCCGTACGGCGTGGCAACATCGTCCGCGGAGCACTGCTGGCCATAGCCGCCGCCGGGCTGATAGGGATCTTCACCGGCAGGGGATACCAACCTGCCGCAGAGGCGGCCCCCACCGCCCCAAAGCCTGTCGCCCAGTCGCCCTCCGCCACGACGGGGCCTGCGGAGATCAAGCGCGTC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGATGGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGACCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2333-2483 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQIR01000466.1 Streptomyces sp. WAC04770 AA000317-1529_WAC04770, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2333 29 100.0 32 ............................. GCGCTCAACAAGCCCTGGACCACCGTGGACCA 2394 29 100.0 32 ............................. ATCGACGCCCGGGTCGTCCGGGTCGCGCGACA 2455 29 93.1 0 C.....................C...... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Left flank : CACCGAAGGACGCCTTCGCCCGCGCCCTGCACATGGCGGACCTCTTCGCGGACTCGAAGCAGGACTTCCCGGGGGCCGCCAGGATCATCGACCGGGTACTGAAGCTGAAGGACGAACAGCCCACGCCGGCGCAGCGGTTGCAGCTGCTGGTGTTGCGCGGGGACCTCGCGCAACGGATGGGAGACGCGGAGGGGGCACGGGGGTGGCTGGAGACGGCGGGATCGGTTCAACTCGCCGCCGAGGAGGAGGCCTTGGCCCGTGATGCGCTGGCTCGGCTGGAGGAGCTGCGGGGGTGATGGAGCAACCGGTGGACCGCTGAAGGCTACCCCTCCAGGCTCGGCGGGGGCGCCCCCTCACGTCTCTCCGCCGAATCACCCGCCATGTGGGGGGCTCTCGAACCAACTGCGCCCAGCCGCCCTCTCTGTGATCATGTAGAGGTGAGCACGCAGCCCAAGGGTCAAGAGCTGGCAAAGCCCCTGTAAACCAGCAGGTGAGGAAGT # Right flank : GGAATCAACAGCGGTAAGGGTGAACCTCAGCAGCTCTCCTCGAACTTGACCGCAGTGAACTCGACCGGCTGCCCATTCAGAGCGGTTCCGGGGGAAAGCGACTGGGTGCACACCCGCCAGTTGCTCTCCATGAGCACCTTCCGGTCCTGGGCCGCGTCCTCGACGGTGATCGACGTACTGGAGTCGAGTGCCTTACGGGCGGCCTTCACGGACTTCCCGACGAAGTTCGGCATCTTTCCACCGATCACCTCAGGGTCTTTCGCATCACGAGCCGGGCACTCCTCCTCCAGCTTTACGGTGCCGAAGTGCAGCACCGTGTCTGTGGGGATGACCTTGCCCGCCGCCATGTTCTGCGAGCAGACCTTCCAGTTCCGGTCGAAGGCCTGCATACGGCCACGACCGGCGCTGTCGTGGGACCTCAGTGCGTAGAAGCCTTCCTCCTGCGCAGCGTCCTGTGCGGACTGGAGTCCCATACCGACGAAGTCGGGAACCGCCCTCGC # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.50,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 936-2062 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQIR01001336.1 Streptomyces sp. WAC04770 AA000317-1607_WAC04770, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 936 29 100.0 32 ............................. TCGGCGGCGTCCTCATGGGCGCCGGAACCCCC 997 29 100.0 32 ............................. AACTTCGCGGAGTCGTTGAAGTACGCGAAGAA 1058 29 96.6 32 ............................A TCGTCTGGAGGGGCATGAGGTCGTTCGGCGCC 1119 29 100.0 32 ............................. TCGAACTCGAAGAACGCGTTCACCAGCGGGTG 1180 29 100.0 32 ............................. CCAGGGCCGCCACCAAGCTCATCGGCATGACG 1241 29 100.0 32 ............................. TGCCGCGCGAAGGTCACCACGATCGCGACGTA 1302 29 100.0 32 ............................. GTCCTCGCCAACGAACCGACCAAGGAGAAGTG 1363 29 100.0 32 ............................. AGATCCCCGGCCAAACCGCCCTGGAACTCCGG 1424 29 100.0 32 ............................. GCGGCGTCGAGGGCTGCGCGGATCTCGGCGGC 1485 29 100.0 32 ............................. TGCTCTAGGACCAGCCCGGGGAACAGCGGGTC 1546 29 100.0 32 ............................. ACGCAGCCTGCTGGCCCGGACTGGACGCGCGG 1607 29 100.0 32 ............................. GGGCGGCTGCGCCTGGAGCATGTCCAGGACTT 1668 29 96.6 31 ............................G CGTCGATCATCCCGGCAGAGACCTGCCCGGG 1728 29 100.0 32 ............................. CTCTGCCACGAGCGCGATGCGTGTCCTGATGG 1789 29 100.0 32 ............................. TCAGGGCTTGTCGACGGGAGTTGCCGGGTAGA 1850 29 100.0 32 ............................. ATGTTCCCGCGCCACTCGGTCTCGTAGTCGAT G [1872] 1912 29 100.0 32 ............................. CGTACGGAGCCCGCGACGGTGTCCCGGTCCGT 1973 29 100.0 32 ............................. GCCAAGATCCGGTCGCTCAGCGTCCAGATCGC 2034 29 89.7 0 .....................A.AG.... | ========== ====== ====== ====== ============================= ================================ ================== 19 29 99.1 32 GTCGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : AGAACACCTCGCCCGACACTCCGGCCCCGACCGCCCGCCGCATCCTTATGGAATGCACCGACTGCGGCCGCCCCGGCCAACCAGAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAGCCCACAGCACGAAGCCCGGTGAACTCCCGGCCCACCCCACTGAAGCCGCCGACGTCAAGGCCCGCATGAGTAACCTTCGCGACCTGCTCAGAACCGTCTGAGGCTGAAGCCTGCAAGGTCAGTTCGCGCCAGCAGAGAGCGCGGACACGTATCGGGGCACTGGCGCGGCAACCGTTCGCCTTCACAGTTTCCTGGGCAGATGCCGCACGGCCTTCCTTGAGGAAGGGGGCGCCCCCGGGGGTGGTTGGCGGGCAGAATGACCCCTGGCATGCCCAGTCTCGGGTAAGGGCTGGTTGCAACGCGGGAGAGATATGTCCGTTTCTCAAGAAGTAAGCAAAAACAGCCCCTCAGCCACATAAACCCGCAGGTCACGAACT # Right flank : CGGCCGCCCGAAACCGGAAATCGATCATCTTCTGTCGAGTTCGAATCACTTTTGAACAACTGGCCCCTACAGGGCATTTCCGCATGTCAAATGCCCACATGCCCGCGATCGACACGGAACTCCTCACCGCGTTCCGCCACCTGTCCCCCACCGCCCGAACCCCCTGGGGCAAGCACGATCGGCCGACCGAGCAGTGGCTCCCCCTGTGGCGGCACATGGCCGACAGTGCAGCCGTGGCAGGCAGGCTCTGGGACGAGTGGGTGCCCGGCAATGTGAAGGAACTCGTCGCGGGTGCCTTCCCCCAAGGGGCCGACGACGCACGGCAGGTGGCCGTTTACCTCGCCTGTGTGCACGACATCGGCAAGGCCACCGCCGCCTTCGCCTGTCAGGTGGACGGGCTCGCGGATCGGATGCGGGCGGCCGGGCTCGAGATGCCGTATCTGAAGCAGTTCGGGGCGGATCGCAGGATGGCTCCGCACGGGCTGGCCGGGCAACTGCTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2737-2524 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQIR01000272.1 Streptomyces sp. WAC04770 AA000317-1804_WAC04770, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2736 29 100.0 33 ............................. GACGCGTGCCCCGTACTGCACCACCTCGCGGAG 2674 29 100.0 32 ............................. CACCTGGCGGGGTGAGTCTCCGCCGAAGCGCG 2613 29 96.6 32 ........................G.... GCGGGCTTCAGGGCGTTGTTCCAGAGCCAGGT 2552 29 82.8 0 .....................A.AGC..A | ========== ====== ====== ====== ============================= ================================= ================== 4 29 94.9 33 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : CCTTTCCTCGACCACTACCAACTCCTGCTCCCCAGCGGGTGCTTCACCGAGCCACTGCTCCAGCCGCCCTTCCTCCTCCAACAGATCCCACTGGTCCTCGTCCAGCAGGTCGGCCAGTTCCCGGTCGGAGGCCTCCTCCTTCATGTACCGCTCGTCGTACTGCTCCAGAAAGCGACGCCACTCCTCGGGCGTGGTCAGGACGTCAGTAACTTCACTGTCTTCAGGCTTGGTTGTCTCATCCATGCGACTCATGCTCGCAGGCGCCTATGACAACGCCCCCTGTCTCCGGGGCGGCGGACGGGCTGACCGGCGGAGGGAACCGCACCGACTGGACGTGGTTGGCGCTCCTGTGCCACGCGCAGCACCGAGGAAGGGCAGAATCACTCCTGGGGTATTCGGCTCAAGCAGGGGCCCTTTCCCGAGACCGGAGGGATATGTCCGTTTCTCAAGAAGTAAGCAAAAACAGCCCCTCAGCCACATAAACCCCCAGGTCACGAACC # Right flank : GAAGCTCAAAAGGCCCACAGGACCCGCCGTACCCGAATGAAGCCATCGGGCGTCGGCTGACGGCCTGCCATGCCTCCGTGCCGCCCACGACCAGAGCACCGAGCACCGAGCACCGAGCACCGAGCACCGAGCACACGTAACGCCGTCCTCCTCCGACTCGTTGTCGCGAGAGGCGAGAGACATGGGTGGTCGACGCCCGCGGAGCCCAGGAGGCTTGGGAATCATGATCGAAGAGGGCGGCCCCGGGGGATGCCCGGCATCGCGGGAGGAGCCGCGCGTCGCGCACTCCCGTACGCTGCGGTTCTGGCTCGATCCGGCGAATATCGCGGTGCGCCTCGGCCAAGCAGGCCCCGTCGCCCGGACGAAGGCCGGACCGGCGGTCGCCTTCCAGGTCAACGACCCGTCGCTGCTCAGAAAAGTCGGCTGCGGGGAGGACACCTTCCAGGCCTGGAGCGCGGACCCGTGCCTTCGGGACTTCACCGGGAACGGTTTCGCCGGAT # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //