Array 1 3805379-3805559 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP037423.1 Stieleria neptunia strain Enr13 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 3805379 36 100.0 37 .................................... GTTCGGAATTCCGAACATTTCCGATCGCGTCAGCCGA 3805452 36 100.0 36 .................................... CGACAGTCAGCAAAGAATCAAGCGACCTTCGCCATA 3805524 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 3 36 100.0 37 GAGCAGCTATCCGGCGATCCCAACGCCCACTGCAAC # Left flank : AACGGTGGTTGAAGTACAACGAAATGATCGAAGCAGGCGACCCGGATTGCGAATCGTTCGACCTGGCCGGCCAGATCGCCGAGGATGCGTGCCCCCTCCCGCCCTGGCTCTATTCCGCCGATGAAGAAAAAGAAACGCGATCGCGTGGTCGATGATTCAAACCACCTTTTGACGCTGGCCGAAGTTGCCAGAATCGCAAACGTCAAACGCGATGACGTTGACCGATGGATTGAGACGGGAGCGTTGAAGTCGGTCCCGATGCCGGGCTCCACTCGGCGACGTGTGAGGCGGCGAACGTTGAATGCGTTTCTGGCCGAGTTGCGGGAGTGAAATGCTCCGCCCCCGGATCCGGTGTCGGTCGATCGAGCGGCAACGGCAGCCGCACAATCATGCGGCCGGTGATGACCAGAGCCGCCGGTGATTGCGTCCCTGCAGGGACGCAGGAAACCGCGTCATCGGACGTTGCCGACTAGAATTGACGTCAATTCTAGTCGGATAGT # Right flank : CAGCCCCATCGGCAGCCCCCGCAAAACACGGGGCGAAAATGACCGTTTGCGAGCGGTCCCCGATTCCATGTTGAAAAACTTTCGTTGTCGCTGTTGACTCCGGCTTTAGGTCCCGGCAAACTCTGGTCTCTGTCTGGCTGTTTTGCGGGCTTGAACACTTAGCAAAACTTCTGATCGGTTCGTTTCACCCGATCAGCGACCCGGCCTCCACACGATTCTTAGGCAAATGAAAATGGAAAAGTCGCTCAATACGTCGGTGTTATCCAAGCGTTGATCCTGCACAGGCAGGGGAGCAAAGTTTCATCGGGCGGCCAAGTGGTAACACTTGGTAGGGACGTGTGCCCTTTCGCTGTTCAAGCGTGTTGAGCGACTTTTCCGTGCGCGCATCGAATCGGTGCGCAAGGGGGATTTCATCCCATGGCTTACATCTCTTTCTCTGAGGCCGCACGTCGCGCCGGCGTTTACGTTCATGGCGTTCACAAGTTGGCCGATGCGGGCAT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGCAGCTATCCGGCGATCCCAACGCCCACTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 2 4890719-4886999 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP037423.1 Stieleria neptunia strain Enr13 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 4890718 32 100.0 37 ................................ TTCGCGCCATTCGTGCAGACTGTTCAAAATCGCGCGT 4890649 32 100.0 35 ................................ TTCAACGCCGTGTTCATCAACGGCGTAACTGTCGG 4890582 32 100.0 37 ................................ ACCAGGTCCCACGTAACAAAGTAGGATTTGCCAGTAC 4890513 32 100.0 33 ................................ GCCATAGCTATCGATGAAGTTGTTCAGCGTTGC 4890448 32 100.0 36 ................................ ACGCGATCGCCCTACAGTGCTCGCGTAGCTGTCGCC 4890380 32 100.0 33 ................................ TTGCGCAAGGAGATTTGTGCAACTGACCTGCGA 4890315 32 100.0 34 ................................ CAAATCCTCTCGCTCGTATCGTGTGAGGATGAAG 4890249 32 100.0 35 ................................ TTGAGCATGGGTCAGCCGAGTTTATCGGTGGTCAC 4890182 32 100.0 34 ................................ TCCCTCATCCTCTTCCGTGTTCGGGTCGTCCGGA 4890116 32 100.0 34 ................................ TGTCACACGATCGGCCGAGATTTCGAACCGGAAA 4890050 32 100.0 34 ................................ CTCGATGTAACCGAAAGGGAAGAGACTGTCGTGG 4889984 32 100.0 35 ................................ GTCGCGTTGCCGCGTTCGGCGCGAAGCGCTGAAAC 4889917 32 100.0 36 ................................ GTGAACCCCGGCTCGGTCTTCGAGGCCGGCACGTCG 4889849 32 100.0 34 ................................ GCCTTCACGGCGGATTGTGTCGCCGGATTTTCGC 4889783 32 100.0 36 ................................ GCCGAACAATGCGGTGGCGTTGATTAACCGCTGCTC 4889715 32 100.0 36 ................................ AACTCCACCGACTCGACCGACTACGGATCCAAGGCG 4889647 32 100.0 35 ................................ AACGCAGGGTCGGCCGGCAGAATTCCGAGATCCAG 4889580 32 100.0 34 ................................ GGTGCGCGTTGGGCGGCTTGCCGGGCTTGCTGAT 4889514 32 100.0 35 ................................ CATTAGTTGACCAATCGAGAGAGGGGGAAGCCCGA 4889447 32 100.0 38 ................................ ACCTACTGGCAACATGCGGCCGGTCAAGTGTGATTCAC 4889377 32 100.0 38 ................................ GTCGACGACGGTCATTTCGGTGGTTGGGCGGACGTTTG 4889307 32 100.0 34 ................................ TACCTGACACGTTGTCAGTCCACATCACCATGTT 4889241 32 100.0 35 ................................ ACCTCGGCCTGCCCCTTGTAGTCGGGTTTCTTGGC 4889174 32 100.0 33 ................................ ATCATGGAGGAGTGAACGGACATAGGGTGCCAG 4889109 32 100.0 35 ................................ CTTTTGCACGGACATATCAGCTCGCAACGTTTTGA 4889042 32 100.0 39 ................................ TCGGACCAAGGAAGGTAGAGAGATGACGGCCGCAGCACC 4888971 32 100.0 34 ................................ TCGGAGGGCGGGACATTCAGCTACGACTGGTTCT 4888905 32 100.0 35 ................................ TGCATACTCGAGGGGATCCGCAGAAACGACGTGAG 4888838 32 100.0 35 ................................ CAAAGCGGCCGTCTGGAAATCCACCCCAGGGCCGG 4888771 32 100.0 37 ................................ ACAAACTTCAACGAGCCGTTGACGCCCACCGCTTGCC 4888702 32 100.0 35 ................................ CCCGCCAGTCTCCCCGCCGGGATTGTCCGGGTCAT 4888635 32 100.0 38 ................................ CACTTCCGCGATTACCCGGTCCAGCGTCCCGCACGATT 4888565 32 100.0 35 ................................ ATTGGCACTGGTGACAACGAGCGGTGCATTTGCTC 4888498 32 100.0 34 ................................ CCCGCATGTCCGTATTAGTCGTGCAGGTGCCCAC 4888432 32 100.0 36 ................................ CCGAGTTGTGTTTGACACGGAGGTACTGGGCGACGG 4888364 32 100.0 35 ................................ CACGACATCCCCGCGCAACGGCCCAACCAAGATCG 4888297 32 100.0 36 ................................ GCCGTCCACGCCTTTTGCGTGTGCCATCGTCCACAG 4888229 32 100.0 33 ................................ GTCGAGGACGTCAGAGGCCGCCGGCTGGACGAC 4888164 32 100.0 36 ................................ CTCAGACGACCCAGAGGCATGGCTTGAGACGGCGAC 4888096 32 100.0 34 ................................ GAATTCGCCGCTTAGTTTTTGTTGCTTGCTCACT 4888030 32 100.0 34 ................................ CCAAACGCCCGATACAGTGCCGCACCATCGCGGC 4887964 32 100.0 37 ................................ GCTGGTCGTGTACGCCCGATAGCCTCCCCGCTCCGAC 4887895 32 100.0 36 ................................ GCCAACAGACGGCGACGCGATGCGGCCAACGCGATC 4887827 32 100.0 35 ................................ TTCGGCGATCTTGTCGCCCATCGAAACGAACGAAT 4887760 32 100.0 33 ................................ CTTCGGATCTTTGTTGATGTGATACCGAGGTTC 4887695 32 100.0 34 ................................ GTCGTAGCTCCTGCCGGTGAGCGTTAGGCTCATC 4887629 32 100.0 33 ................................ GCGTTCCACCTGGTCGGTCATCGTCCGCTCAAC 4887564 32 96.9 32 ...............C................ CCGAAGCACTCGCAATCATGGCAACTCGTTTC 4887500 32 100.0 33 ................................ ATCCGCCGCAAACTCCCCCAGGATCGGCAAACC 4887435 32 100.0 35 ................................ ATCCACGTCCGATCGGTCCGCAATGCTCGTTTTAT 4887368 32 100.0 35 ................................ ACGTTGTCGTTAGGCGTCGCGTCCGACGTCGCCCC 4887301 32 100.0 36 ................................ ACAGCTAAAACATTCCGCCTTCACGGGCAGACCGTC 4887233 32 100.0 37 ................................ GCCTCGATCACCACCGCGCCGTCGCCGCTGTCGGGTG 4887164 32 100.0 35 ................................ GCCGCCGACGCACTGGAAAAGGCCGACGAGTACGA 4887097 32 100.0 35 ................................ GCCAGTTGGCCATCGAACACTCTATCTCGGTGGTG 4887030 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 56 32 99.9 35 GTCGCGCCCCATGCGGGCGCGTGGATTGAAAC # Left flank : TGGAAGTAGAGTGTCATGCATGTGTTGGTGACTTATGACGTCGCGACGGTGAACTCGGCGGGCAAGCGTCGATTGCGTCGGGTGGCAAAGATTTGTCTGGATTTCGGTCAGCGGGTGCAGAATTCGGTGTTTGAGCTGCATGTCAATCCGGCGCAATGGGCGGAATGCCGGAAGCGATTGATCGAGGCCTGTGAACCGCTGGAGGACAGTTTGCGGTTCTATCAGTTGGGAAATGACTACGGCGCGAAGGTGGAGCACGTCGGTGCCAAGCCATCGTTGGACACCGAAGGTCCACTGATCGTTTGAACGCTGCCGGGCATCATCCGCGAACCCCAAGTGGTGACGCGATTCCGGGGCGGTTCGCGAATGCGTTTGGGGCGGCTAAATGCGGGTTCAGAATGCGCGTCAAGCTAAACGCACAGGGAAATATGCGACAAGCCGTCCCGGTTCGCGGAACATTGAACCTAAACCCCGCCTCCGCAATCGTTTATACTCCCGGC # Right flank : ACGTTCTCTGGTTGCTTATCGACCAACGTTTCAGGGTCGCGTCCCACGCGCGGATTTCAAGAGAGGATCTAGTTTGCACCGCGATGGCGGAGTGGCTGAGCGGCTTCATGGCAGCGGTTGCCGCGCGGCAACCGCTGCACTCCAACGCTTAGGCCTTTCTTCGAAGAGAACTGCGGGGTCCAAAGCGTGAGGAGCGAGGCGCAGCCAGGGTGAATTGGCTGGCTGAAAGCGGCCGCCATCGAACAAGCGGAAAGGGGTTTACGTGTCGCGGCAGGGAGTGTTGTCGGTGGCGCGGCAGGCGGGATCGCGGAGAGTGATCCTTTGGATCGAGGGGATGCGCCTGAAGGCTGGACACCAACGACTCCGCAAATCGTTCTAAGTTGAAATTGATGCAGGCCCCGGTTTGGCGGTTCGCAATCGGCGACCCCGGTTCCGGATCAGCCCAAAGCTTTTGCGCTCTATCGTGGCAATCTCTCGATACCCAGATACCGTTTGGCAGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCATGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.80,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //