Array 1 2994-49 **** Predicted by CRISPRDetect 2.4 *** >NZ_JDFH01000024.1 Atopobium sp. ICM42b ctg7180000004927, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 2993 36 75.0 32 A.........TA.A.T.G.....T.....A.....C CAATCACAGGAGAGTATTTCGAGATCTTCGCA 2925 36 88.9 30 A.........T.T...A................... AGAGAGCCATTTTAAGCACAAAAAAGCCCG A [2910] 2858 36 100.0 30 .................................... GCAGCCAAGAGAAGGTAGTTGTTGCCATCT 2792 36 100.0 30 .................................... AAGGAAACACACCTTAATCAAGCGCGTCAA 2726 36 100.0 30 .................................... CATAAGACGGCGATACTCCAGGACGCCATT 2660 36 100.0 30 .................................... AGCTTGTTGTGGGTTCCACAGAAGAGGATA 2594 36 97.2 30 .............C...................... TGATAGAAATTCAGCAGTTGCAACGCCTGA 2528 36 100.0 30 .................................... CCTTGCTGATGTGTTCGTGAAGTTCATCAG 2462 36 100.0 30 .................................... GTCTGAAACCAACGTTCACGAGCTTCTAAA 2396 36 100.0 30 .................................... GATTTTATCAATCATCGACGAATACGTGCT 2330 36 100.0 30 .................................... ACGACTATCAAGAATAGCGGGCGCTGAACT 2264 36 100.0 30 .................................... TAAATGGGTGTTTTATGCAGGTTCAGAGGG 2198 36 100.0 30 .................................... CAAGTATGATCTAGGCGACGCGCCAATCAT 2132 36 100.0 30 .................................... TTGCATCGGCGAATACGAGTTGCCGCCGCT 2066 36 100.0 30 .................................... TAATGCTATTCAGTTCATTGTCGATATCTC 2000 36 100.0 30 .................................... ATTCTGCATATGCTCAATTACGGGGTCTAG 1934 36 100.0 30 .................................... TTTATATACGTCTTGCGCCATCGTTCCATA 1868 36 100.0 30 .................................... CTCTTAGAATGGGGCGACGGTGTACATCAG 1802 36 100.0 30 .................................... CGGTCAAGCGTAAGCACCGTGTAGGGCATA 1736 36 100.0 30 .................................... CGTAACAAAGCATTTTGGCTGGCTCTTATC 1670 36 100.0 30 .................................... TATGTAATCGTGACGCGTCCTGGCGTAACT 1604 36 100.0 30 .................................... CTTATTGCCAAAGCAAGCTTATATGCGGAG 1538 36 100.0 30 .................................... AACCCATAGCAGGGCTGCAAACGGGTTTGT 1472 36 100.0 30 .................................... TCTAGCGATACAACATTATGCACTATCTGA 1406 36 100.0 30 .................................... TTCATCATCGAAGACAACGAGCTGCAAGGA 1340 36 100.0 30 .................................... CTTGTTGGCGCTCTCGACCAGGCCACTACT 1274 36 100.0 30 .................................... ATCTGCACACGGGCTATGTGCAGTCGACCA 1208 36 100.0 30 .................................... ACAAACGTGTAATTGCGCTTACGCTGGTCA 1142 36 100.0 30 .................................... TAATAAGTGGCCATAGAGGGCAAGATAAGA 1076 36 100.0 30 .................................... TAGGTAATGAATTTCAGCGATAGGCTTACT 1010 36 100.0 30 .................................... TGTACCGCTTATAAGGCTGATTGTGTAATC 944 36 100.0 30 .................................... ATAGCACAGGCATACCGTGAGAGCCTACAA 878 36 100.0 30 .................................... CTAGCTAGAATTTACCTTGTAAGTCATGTA 812 36 100.0 30 .................................... TCACCCGCTCACAATGTAAGCGAGAAAAGC 746 36 100.0 30 .................................... AGCACTCATGTTTTTCTCTCAAAGCTTGCA 680 36 100.0 30 .................................... TTTACCGCTTAGGCTCTTACATTCAATCAT 614 36 100.0 30 .................................... CTTCAGAAGCTTCTCAGACATACCTTCAAT 548 36 100.0 30 .................................... AGAATTCAAGCGTTGGGTTACTCATGAAGT 482 36 100.0 30 .................................... TTAGTAGTTGCCATGGTAGAACCCCTTACT 416 36 100.0 30 .................................... CAAAGCGATTCCACTTATCACCTGTATAGT 350 36 100.0 32 .................................... TTACTCGTGACGCTCCAGAAGGCTCGGTGTGT 282 36 100.0 30 .................................... AGAAGAACCGTTAGACCATGAACTGAGCAT 216 36 100.0 30 .................................... CTTGTTGGTATCGTTACTACACCCGGCATT 150 36 100.0 30 .................................... TCCGCTGCGTGGTTGAGTCGCACCGCCCAT 84 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 45 36 99.1 30 GTCTTGATTACCGTACGATCTCCCAGGTAGTAAAAT # Left flank : TGGCTTACCATTGATGATAAAAGATATGTCCTAGAGTTTGTTCCTCTTGCAGATAAGATTGCTCCTCGCCTGATTTTTGGAGCCATAAGCAATGTGTTTATGCAAGAACTTCACCATGGAGACCAAGAGAAGGTCCCACGAGAACTCCTCGAAGACTTCAAGATTGCATTTGAGAACGCCAAATACAGGCGCTAAACAAACTAATTTTTTGAATTACTCATATCCTTGCGAATAAGCTCTTTGATGTAGCTTGAACGGTTCTCTTTACCTTCCAAGAACTCTATTAAATCGCTATCGCTTGGATATAGATTAAACATAATTGCCTTTACGTTATTCTTTCGATATTTAGCGCTGGCCCTTTTCTGTGCTTCACTAGTAGCCATAATAGATGCCTTTCTTTTATACTTTTCTAGGTATAAGCTGATATAGCAACGTACGCCATTAATCATATATTTAATTTTATAATAACCCCAGTTTTTAATAGAATTCACTGCGACTAT # Right flank : TCATACGCTGATAGGTTCTGCAAACCTTCTGGTCTTGATTACCGTACGA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGATTACCGTACGATCTCCCAGGTAGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.20,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //