Array 1 254093-253085 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAARRC010000004.1 Listeria seeligeri strain FSL L7-1580 NODE_4_length_414884_cov_160.983896, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	=============================	======================================	==================
    254092	    29	  96.6	    38	.......C.....................	AAAATTATTAAGCGAAATAAAGATACCAGGTAGATTTT	
    254025	    29	 100.0	    37	.............................	AAATAACCGTGTCAGATACCTGCCACAAAGGTACCCG 	
    253959	    29	 100.0	    36	.............................	TTGTTTGAGGCAGTAGAATCATAATAAGGGACTATG  	
    253894	    29	 100.0	    35	.............................	CTAGATGGGAGAGCCTTCAATATTCACCTATCTTC   	
    253830	    29	 100.0	    34	.............................	TCAATAGCGTTATCTATTGAAGAGTCGACAACAT    	
    253767	    29	 100.0	    34	.............................	ATTAATTGTAAAGTGCGACAAGAAAAAAGCATCT    	
    253704	    29	 100.0	    37	.............................	TCCCGCTAGTTATTTACTACACTAACATCATACCATA 	
    253638	    29	 100.0	    35	.............................	CTTGCTTAGATATTGCTGGACTTTTATATACATCT   	
    253574	    29	  96.6	    37	..........T..................	TGCGCATGGAAGTTTTCTCCTACACGCACATTTTCGC 	
    253508	    29	 100.0	    37	.............................	CACTGAATCGAGGAAGATTATCATTCACTTGTATTAC 	
    253442	    29	 100.0	    36	.............................	TTTTTTAAGAACTCAGACAGCGGTTTTATGGAATTC  	
    253377	    29	 100.0	    37	.............................	TCCAGTTTTATAAATTTAAAATTCTTCGTTGGTGTAT 	
    253311	    29	 100.0	    38	.............................	TGCCTTGTTTGCTTTCAGCTGTGCGTCAGAGGTCGTTT	
    253244	    29	 100.0	    36	.............................	TCAGGAGTGGTAATGTCTTCTGTTGCTACCACATCA  	
    253179	    29	  82.8	    37	..A....C....C........TC......	GTGGTCACAGCCTTCTTATTGCCAGCAGGTGAGCCCC 	
    253113	    29	  75.9	     0	.......C.......CA.....CA...CC	|                                     	
==========	======	======	======	=============================	======================================	==================
        16	    29	  97.0	    36	GTTTTAATTACTTATTGTGAAATGTAAAT	                                      	       

# Left flank :   AAAGTCACCGTTCCATCTTTTTTCTCTTTTGTCTCTGCTTTGCTCGTCGTTGAATCATTCCCACAGCCCGCAATCAGTAGTAAAGTACAAAACACCACCATCAACTTCCAAACATTTTTCTTCATCCTTTTTCTCCTTTTTTCTATATAGTTTTTAGCAAAATAAAAACCCAGATAAATCAAAAAATAGCCCAAAAGCCATCTTCCAATCCATCTAGGTTATGCCCAAAATAGGTAACATTCCTGAGTGAGGTATTTGTTTATAGGATGATTTTAGCACAGATGGTAAGCGTTTACAAGTTTACGTATTTTCTGTCGATGTGTGGTAGCGTGGAAAGTACTGGAGACCGACAGATTTGTGGGATTCGTTGGGCGAGAATGAGAGTGGGGGGGGATTTGGGTTTTGAATAGTAATTTTAGGAAGGCGGAAAGCCAATTTTGAGATAGGTCGACAAAAATAGCCTTGTGAGGTAAGATGGGAGTAGGGATGAAAATGGACGG
# Right flank :  CCACCCACCCTTAAAGCCAATAATCTGCTCTAAGGGTTTTTTATTCAAAAAACCACACCCCCAACCTCCCATTTTTTTCGTCCAGCGAAAACCGTTTTCGAAATACTTGTAACCGCTTGCAAGGGGAAAGCTCTATAACTATAATGAACGTAGTAATTGAGTCAGATATAATATTTTTCAAAATTAGCTAACTGAAGAAATAGAAAACGGAAAAATGGGAATATTTAATTATGTTTTCATTTTAATCTAACAAAAAGGAGAGCTTAAGTATGAAAAAAATCGTATCAATCGGTTGTATTGTGGGACTTTTAATGCTTTTAGTGGGGTGTGGAAGTGAAGAAGCATCGAGTTCAAAAGTAGAGTTTTACACGGATAAAGGTGGAGAAAATGTTGGTATTTTGAATTCTATGTCAGATCAGATTGAAAAAGATGGAGGCGTTGGATTTAAAACAGTGGGGTACACAGATGTGACTTCATATGAGACAGCGGTGCAACAGTCA

# Questionable array : NO	 Score: 6.11
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAATTACTTATTGTGAAATGTAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:82.76%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTTACTTATTGTGAAATGTAAAT with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [12-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
//