Array 1 106194-105806 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEIH010000002.1 Acinetobacter baumannii strain A217 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 106193 28 100.0 32 ............................ TGATTGCGGTGATGAGACCATTTTGTATTCTC 106133 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 106073 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 106013 28 100.0 32 ............................ CTCCTCATCAAATAGGTCGGGCCAACTGGAAT 105953 28 100.0 32 ............................ TCCGCAAGCGTGGCTTCACTGTTAATTTTCGT 105893 28 100.0 32 ............................ AGTGGAAGAAGTCGGGCGAGATCATGATTTTG 105833 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCGTCATCGCCCAAATGATTTAGAAA # Left flank : GACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGGGATGAAGGAAAAAATTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAACTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTCGCTGATCTAGTTAAAGATGCTTTTGTAATGCCAATTGCTTTTACATGTGCAGCAAAAGGATTAAATCAGAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGCAGTAAAATCAAATAAAATCATACATTTAATCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTAAACTTAACTTT # Right flank : TCTGAATCTTAAAAAAATCCAAAAAATTATAGTTCAGGACTTTTCATTAATCTTGGTGGGCTTGATATCTCCCCTAATAGCCCATTGTAGAATCGATCTCTCTAATTAGGAGCGTGGTAAATGTTTTGACTTAGTAGGCCCATGCAAAAACTGCCCTTTCCGCAATGATAAGCTCGAACAAAAAGGCTGGTTAGGCTCTGCCCGTGCTCAGGATATTTTCGACAATTTAAAAGATGGTGGCTTCTTCCCTTGTCATAAAACCAATGATTATGTCCGGGATGAGAAAGACTATAGCGAATATGACGATGAATGTGAAAACGAACCAAAGTTTAAGATTCAGGGTCAACATCAGTTCTGTGCCGGTGCTTTAATTCTTATGGAGAAAACAGGTGCCGCAGACAGATCTCAGGTTATCCAAATTGCGGAACGATTAAGATTGTACAAGAAGGATAAACTAAGAATTGCCACCTCCTCTGTTTTCAATTCAGAGCTTGAGTTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAAATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 111282-114251 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEIH010000002.1 Acinetobacter baumannii strain A217 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 111282 28 100.0 32 ............................ CACCAGTCCGGACGGCAACGGCATAGGACGCC 111342 28 100.0 32 ............................ TTTAAACATTAGTAGTTGTTGATTATCCATCT 111402 28 100.0 32 ............................ TTGTTGGCGGCGACGCATCGAAAATCGGCTTT 111462 28 100.0 32 ............................ TATCGAAGAACGCATTTTATCGCGTCTGGACT 111522 28 100.0 32 ............................ AAGCGGCATACGATGGCGGCATGCACTGGCAC 111582 28 100.0 32 ............................ TTGTAATTGAGAGTAGCTAACAAAATCAGACT 111642 28 100.0 32 ............................ TTGTGCAAAACAGACAAACATTTGTAAGCGCA 111702 28 100.0 32 ............................ TGAGAAGATTAAACACAGCAATGTGATGATCG 111762 28 100.0 32 ............................ AATCTGTTGACCTTGAAAAACTGCAATATATT 111822 28 100.0 32 ............................ ATTGTGGTGTAGCAGGTTGGATTCGAACCAAC 111882 28 100.0 32 ............................ AATAGTAGATATATTGCTTAATGATACATCGC 111942 28 100.0 32 ............................ ATAACCTAAAGGCTCGAAGGGGCGGTCTGCAA 112002 28 100.0 32 ............................ AACCATCACGACACGGGCATTACCTGCTGCCC 112062 28 100.0 32 ............................ TCAGCTCCCCATTCGCTTTCACCCAACTTAAT 112122 28 100.0 32 ............................ TTATCCTTTTAAGATGCTTTGCGAAAAATACT 112182 28 100.0 32 ............................ GCATAGTTTTGCGCCCCGCACACAACAAAACC 112242 28 100.0 32 ............................ TCAAAATGAAGATGAACAGGCCAAGGCGATTG 112302 28 100.0 32 ............................ TGGATACTGTGATGAAACAAGAGAAGCCTACC 112362 28 100.0 32 ............................ TTGCAAATCTGGTACGACTCATTGGCAAAGTT 112422 28 100.0 32 ............................ AAGAAAAGAATTTCATGTTTGAAATGACGGCA 112482 28 100.0 32 ............................ AAGAATCGCACCTAGTGCCACATTAATTAAAT 112542 28 100.0 32 ............................ TAAGTATTTTGGAGAGTAGGCCAATGGGTTAG 112602 28 100.0 32 ............................ AGAGCAGTTTATTCGTGAGTTTGGGGTGGAGA 112662 28 100.0 32 ............................ TTTGATAAGAAGCAAAACTTTTAGTCTTTCCA 112722 28 100.0 32 ............................ TTCAAAATCACTTAAATGTTGCTCTGGAATGA 112782 28 100.0 33 ............................ AAATTGCGCCCATTTCAGCAAACATGTAACCCT 112843 28 100.0 32 ............................ CTCTTCAAAATACCACCCAACCCCGTGCGACT 112903 28 100.0 32 ............................ TTTCTGCATCCACACAACAAACATAAAGACTA 112963 28 100.0 32 ............................ TGATTGGTGTATTGAAGCAAGCGACTAGTTAA 113023 28 100.0 32 ............................ TGTAGTCTCAATCTTGAACCGCTGGCACACAC 113083 28 100.0 32 ............................ ATAGAAGAATCGGCAAGCGTATTCATAAACTC 113143 28 100.0 32 ............................ ATTATTGGTCAAAGATTGACTTAATATAATCA 113203 28 100.0 32 ............................ ATAGTAGTAATCGTTTTCAATGTGCTTGCGGA 113263 28 100.0 32 ............................ ATGAGTGAGTTTAAAGTCGGGGATAAGGTTGT 113323 28 100.0 32 ............................ TTAGCTCACATAATGAAAATTTGTCACTTTGA 113383 28 100.0 33 ............................ TTGGCCGTGAGTTCCCGACCGCGATTGGCGACA 113444 28 100.0 32 ............................ AACGTCGTTCGGTTACTTACATGAACGACCGC 113504 28 100.0 32 ............................ AGAAGCGCGTTAACATTCTTATGGAGGAGTTT 113564 28 100.0 32 ............................ CGCTGATTTAGATAAGAACGGGAATGTTCTTA 113624 28 100.0 32 ............................ ACACCGACACGCGTTTGAGCTAGCGTAACATC 113684 28 100.0 32 ............................ TTATATCGCTAAGATGCTTAACCAGCCACAAA 113744 28 100.0 32 ............................ TGCGCGAAATGGTGCGAAATGGCGGCATGTTT 113804 28 100.0 32 ............................ GGTTGTACAGGTCAATGGTGCAACGCCCGTTC 113864 28 100.0 32 ............................ ATTCAGTAGGGAAAGCTTCGCCGTATGGATTC 113924 28 100.0 32 ............................ AGACGCTACACGATCCTTATCTAAAGCCAATT 113984 28 100.0 32 ............................ TAGCGGAAAAAGTCTATGAGATCATGAAGGCC 114044 28 100.0 32 ............................ ATGAAGTGTTTAATTGGTACTGTGGCGAACCT 114104 28 100.0 32 ............................ CTTATGTCTCTCAATGGTGGTATTGATGATGT 114164 28 100.0 32 ............................ GAACCAAGATCAATCGTAGTGTTCGGGTTAAT 114224 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 50 28 99.9 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : CTTTAAAAATAGAGGCCGTTTTACCTGCATTTGCCTGATAATCAGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTAAGATAAGGTAAATCAAGTGCTTGTTGCTTACTTAATCGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGCACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGGAAAATGAAAGTATTGAAGGAGAGAGTTGCAACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTCAGAAGATTAGGTTATATTTTTTAAAAATGGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : GAGTTTCTTCCAAAATTTAAGACGATGTATTTTGTCGTTAAAAGGTCGTATTAAACTGATTAAAGCTAGAGGTGGTCCCACTTGTTTGAACAACTAAAAGCGTATTTATAAGTGATATTCCGCTCTAGTTAAGCCACCTTGTTTTGTTGGGGTAGCTGATCATAGTAAAACTCATTTGGTGTCATTTTGTCTAGACTCGAATGAGGTCGTTTCAAATTATAAAACTCAAAATATGCACTTAATTGCTTTTTCGCATCTGTGACACTGCTATAAGCTTTGAGATACACCTCTTCATATTTAACGCTCCGCCATAATCGTTCAACCATCACATTATCTACCCATCGACCTTTACCATCCATACTGATTTGAATGCCATTTGATTTCAATACATCAATAAATGCATCACTGGTAAACTGGCTGCCTTGGTCTGTATTAAATATTTCAGGTCGACCATATTTTTCAATCGCTTCATTTAAAGCCGAAATACAAAAATCCACCTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //