Array 1 64172-62882 **** Predicted by CRISPRDetect 2.4 *** >NZ_VBUG01000006.1 Aliarcobacter thereius strain 17CS1200_2 NODE_6_length_93774_cov_40.605198, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 64171 36 100.0 30 .................................... TTAAAGCTGTTACTTTTTTCTCTGTATTGT 64105 36 100.0 30 .................................... CTTAGAAGTTCCTATCTCTATTCTTGATAA 64039 36 100.0 30 .................................... ACCAACCTACTTTTATCTACGGTTCTTATT 63973 36 100.0 31 .................................... TCTTCTAAGTTTACTATTGATATTGACTTTA 63906 36 100.0 30 .................................... TGCGAGTGTAAATATTCAAAATAACTTACA 63840 36 100.0 31 .................................... CCTGTGTATTTAAATCAAACTCAAAACCTTG 63773 36 100.0 30 .................................... GTTATGACAAATAACACAAAACCAATAATA 63707 36 100.0 30 .................................... ATTATTGATGGTTTAACTTCTCAATATAAG 63641 36 100.0 30 .................................... ACAAAAGATTTCTTTGACACTTTAAACGGA 63575 36 100.0 30 .................................... CGAGAATGGTAATGAAGTATCAAAACCTGA 63509 36 100.0 30 .................................... CTGTTTGTAGTTCTATTGTATCATCAATCT 63443 36 100.0 30 .................................... AGAGTTTTATCTTGATAATTCACTTATAGT 63377 36 100.0 29 .................................... TTGTTTATTTGTGAATTTCACGGCTAATT 63312 36 100.0 29 .................................... TTACTATATAGGCGAACCAATAAGACCGA 63247 36 100.0 30 .................................... ATGTATAGCTTATTTTAATCAATACGCTTA 63181 36 100.0 30 .................................... TAGATGGAGAAATTATAAATCTTGAAAAAT 63115 36 100.0 30 .................................... TAGGATATGAGTCAAATACTAGAATTATCA 63049 36 100.0 29 .................................... GCTTCAATTTATTCAAATATTAAAAATTT 62984 36 100.0 30 .................................... TAAGATGGATAAATTAACGGCAAAATCAAT 62918 36 94.4 0 ...............................G...G | T [62885] ========== ====== ====== ====== ==================================== =============================== ================== 20 36 99.7 30 ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC # Left flank : TCAACGAGTTCAAATATCATATTGCATGAAACAAATAGTTGCAAACTATCAAAGTATATGTTTGGGTAAAGTTGAAGATTTAAAGCTTTTTAGATTATGAAAAAGCAAAAAAAAGAAGAGATAAGTAGGTATAGAAAAATGGTACTCTTTGCAATGTTTGATATGCCAACAGATACAAAAGGTGATATTAAAAAATATACAAAATTTAGAAAAAAACTTCTAGAGATGGGGTTTATAATGTTTCAATTCTCTATTTATGTGAGATTTTGTAACAGTTTAGAAACAGCACAAAAATATGAGAGAAAAATCAAAGAAATTGCACCAACAAAAGGTTCAATAAGAGTATTAAAAGTAACAGAAGCACAATATAAAAATATGATTATTATAGAAAATTATCGCAAAAAACCTGAAAAAAAAGTAGAAAAACAGACTCAAACAGTGCTTATTTTTTAGTGTAAAAACTTTATAAAACCCTGTATTACAGGGTTTTTGCCTACTCT # Right flank : AAGCTTTAGTTTCCTAAAGCCTCTTTAATAGCAAAAATTTCATTCATTGTTTTATAAAGTTGATCAATATGAAGCATATTTGGACCATCACTTTTTGCAACTTTTGGGTCAATATGCGTTTCAAAGAAAAATCCATCAACTCCAACACTAGCAGCCGCTCTTGCCATATATGGTACAAAAGAGCTATTTCCCCCAGTTGTTCCACCAGTGCTTGGAATTTGAACACTATGTGTTGCATCAAAAATCACAGGAGCATATTGTTTAAGAAGTAGTAAGTTTCTCATATCTACAACCAAAGCACCATATCCAAAAGTATTTCCTCTTTCACAAAGCCAAACACCAGCTTCTTTACTGCTTTCATAACTTACTTCATTTACTCCTCTTGTGTTTAATACTTTTTCAACAGGATGTTTCATAGCATCAGCTGCTAAAAATTGACCTTTTTTTATATTTATTTTTGCAGGAGTTTTAGCAGCAGCTACAAGTAAATCGGTTTGTCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.20,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //