Array 1 36157-36850 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJFS01000004.1 Mycoplasmopsis canis UF33 Contig04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 36157 36 100.0 30 .................................... AAAATTTAGATAAAATGGTGAATGAAAATT 36223 36 100.0 30 .................................... CATTTAACGATGCTAGAACATTTTATTTAA 36289 36 100.0 31 .................................... TCTGTTGTAAAAGTTCTCTCAGTTCAGTAAC 36356 36 100.0 27 .................................... GGTTAAACAAAAATTAAAAAAAATTAA 36419 36 100.0 30 .................................... CATGCTTTTTACTTTGAAATAATAGCAACG 36485 36 100.0 30 .................................... TTTGGTTCTTGTTGCTTCTCGTTTAAAATA 36551 36 100.0 30 .................................... TTAATTCGAAGTAGTGCAAATATTGAGGAT 36617 36 100.0 30 .................................... GTAAAGAGGGATAATTAATTTATAGAGTTA 36683 36 100.0 30 .................................... CTTTATTGATCAAGTTTTCATCTTTCATAA 36749 36 100.0 30 .................................... AGATGAAAACAAAAAACATATTAGAGAATC 36815 36 94.4 0 ..............................G....A | ========== ====== ====== ====== ==================================== =============================== ================== 11 36 99.5 30 GTTTTAGTGTTGTACAATATTTGGGTAAACAATAAC # Left flank : TTAACAAAAATTATTTACAAAATATTGCCAATAAAGTGAATAAAAAGATAGGTTACGATCTGGTTAATATAAATGAATCAACTAGTAAACTATTTAAGTCAATGTTTGATATTAAAACAAAAGAATTTATAACATCAAGTTTGTTATACAGTTTTTTAAGAAACATATCACAAGCAGAAAAACAAAATATAATAATCAAAGATATGGATGATATAAGTCTATCTCTTTTAACAGAATTTTCAAATGACTTCAACATTATAGTAATGACCAATAATTCGTTTAATATAATTAAAAGCTCTTCAGAGGTATTATTAACAAATTTTGTAGATGAAAATCTATATACGTTAAAAAATATAGATAATGAGAACGTTTTTGAATATTTCATTGAAGAATATTTTCAAAAACCGTTTGATAACGTTAATCATGAACTTATTTACACAAAAGAAACAATGGAAAATATGAAAAAAGCTTTATTTTTAAAATAAATTCTTTGTAATGAG # Right flank : ATTTAAAAAAACATTCAATTTATTTTGAATGTTTTTTTAAATTTTAACCTTTGAAATCATATAAATAGCCGCAGTTTCTGCTCTTAAAATTCTTTTCCCTAAAGAAACGCAATCAACGTTGCTATTTAAGGCAACTTCTATTTCATTATTAGAAAATCCGCCTTCAGGCCCAATTAAGAATAAAACATTAGAATCAATATTATTTTCAATCGAAGCTGATTCATCTTGTTTTTCATGAGCAATTATTTTCTTATACCCCTCCATTGCTATTACATCTTCAAATTTGTGTAAATTCGTTAATTCAGGGATAATGTTTCTGAATGATTGCTCAGCTGCATTTTGTAAAATAGTTTGAAATCTCTCTAGTTTTTTTTCAAATTTATTGAATTTATATAATTCGCCATTAGTATACTCAGTAACCATGGGAATTATTTTTGTAGCCCCTAATTCAACTAATTTTTGAAGTGCCCATTCAAATCTTTCGTATTTAATTAAAGAAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTGTTGTACAATATTTGGGTAAACAATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGTGTTGTACAATATTTGGGTAAACAATAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-86.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //