Array 1 127912-129135 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEOC01000002.1 Pediococcus acidilactici strain FAM20623 FAM20623_scf0002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 127912 36 100.0 30 .................................... TCACCTTGTGATTGTTCGGCAACATGATAA 127978 36 100.0 30 .................................... TGGTAAGTGTGTCTCTTGCCGCAGACTCAT 128044 36 100.0 30 .................................... TCCAAAAGCGTCCATAAATTCAGTTGAATT 128110 36 100.0 30 .................................... CCGAAAAGGAGCGTCAACGCTATAACCAGC 128176 36 100.0 30 .................................... TAACTTTACGCTGGGCTCCAGGAATCATTC 128242 36 100.0 30 .................................... CACTTGAAAAGTAAGAACTCTCTCTCATTT 128308 36 100.0 30 .................................... GAAGATAAGCAGTATTTTGATGAAACTATA 128374 36 100.0 30 .................................... ATTATCTCGCATTGATTCTGTGTAGATATC 128440 36 100.0 30 .................................... ACTAGATGAGAACAATGGCTTTGAAAAGTT 128506 36 100.0 30 .................................... TCGACTTCATGTTTACTTGGCACGTGCCAT 128572 36 100.0 30 .................................... TTGACGATTTGCCCGGGTTTCACCGTGCTT 128638 36 100.0 30 .................................... ACAACACTGCCGATGGATTAAACCGTAGTA 128704 36 100.0 30 .................................... TATAAAATTTGGCGGTTCGTGACTTCCCGC 128770 36 100.0 30 .................................... ATACTCTTTTAAACAATACCAAACACCATC 128836 36 100.0 30 .................................... TGCCAGTTATTGATGAATTCGTTGGCTTTC 128902 36 97.2 30 .................................T.. TAAATTACACGTTCATCATTAACAACATTA 128968 36 100.0 30 .................................... GTGGACTTACGACACTGCCCATGAAGTTGT 129034 36 100.0 30 .................................... CCGCATTGACCATGGAATATCCCATTTCAA 129100 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 99.6 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGGGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGGTTTTGAAGATCCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATGGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAATAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : CTGACTGAAATTAATAAGAGTTAACGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCGCTCGAAACGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGATATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //