Array 1 78247-76108 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNDE01000014.1 Parabacteroides merdae strain BIOML-A10 scaffold14_size264276, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 78246 32 100.0 33 ................................ GTACGGTTTTATCATCCAATCTTGTAGGCTATA 78181 32 100.0 34 ................................ AGGGTGCGCGCGTCTATTGTCAAAGGTAAACGGA 78115 32 100.0 33 ................................ AGAAAAACAACAACAACTCCACTCAAAGTAGTG 78050 32 100.0 34 ................................ TTGTGACTATGTATGCTAAAGTCAATAATATTGA 77984 32 100.0 35 ................................ TGACGGTTCTATTTCTGTATTTTGCGACGAGGAAA 77917 32 100.0 33 ................................ ACTATTTGAGCAATGTGCCCAACAGTTATATCG 77852 32 100.0 34 ................................ TGAAACTTGGTCTCGTACAGCTAATCTCGACGCC 77786 32 100.0 33 ................................ ACTATTTGAGCAATGTGCCCAACAGTTATATCG 77721 32 100.0 35 ................................ CGGCAAGAAATAACTCGCTAATCGCCGTTAGGCGT 77654 32 100.0 33 ................................ AAGAAAAAACAAACTCCTGCGCCCGTTGGTGAT 77589 32 100.0 34 ................................ CAAGTTGACGAAAACGGTAAACGCATACCTTATT 77523 32 100.0 34 ................................ CCTAATATGGGTATCAATAAGGATGATCCTTTTA 77457 32 100.0 34 ................................ AGGCTTAATGCGAATAGAACTATTGGGTGGCACT 77391 32 100.0 33 ................................ TACGAGAATGGAATATGCCCTGACTATTGATGC 77326 32 100.0 34 ................................ AACATGCGTCTTAACAAAAGATTCTTTCCAAATA 77260 32 100.0 34 ................................ ATCAACCTGGTAATAAGACCACGCCTTTTGTATA 77194 32 100.0 33 ................................ AAGAACACAGTCTGACTTTTATAAGGTTCAGAT 77129 32 100.0 36 ................................ AGATAGGTACGGCTCAAATGATAATGAAGGAACATG 77061 32 100.0 33 ................................ GGTGTTATTTTGAACGATAACATACAAATGAAA 76996 32 100.0 33 ................................ AAATCCTGTTTCTTTATCTGACACACAGGCGAC 76931 32 100.0 35 ................................ TATTGGAGCCGGTAGACGCCAAAAGCGCGCCATTG 76864 32 100.0 33 ................................ CTGTTTGTCTCTTACTCCTTATTCCCAATTCAT 76799 32 100.0 35 ................................ ACGAATATAAATACGATCAAAGCCCAAGGCCTTTT 76732 32 100.0 34 ................................ ATGGAAAAGAGTAGGGAGGTCGAAAGCGTGATAT 76666 32 100.0 34 ................................ AGGAACGGGTAAACATACTTGAATATGCCGCTTT 76600 32 100.0 33 ................................ TTTGAATTTACCCCCTTTAGAGGATATGGAAGC 76535 32 100.0 36 ................................ TTATATTGTACATCTATTGCCATCAAATGAATCATT 76467 32 100.0 34 ................................ AAGGTCAAAACGCTTATTATTAAGTATAGCGGTA 76401 32 100.0 32 ................................ TGACGGTAATTTAAAGGACGGTCTTACCGTTT 76337 32 100.0 34 ................................ CGTTATATGTTTTATAACATATAGTCGGTTGTTG 76271 32 100.0 34 ................................ AATGGACGAGCCGTTGAAAGAGCTGTCATACTTG 76205 32 100.0 34 ................................ AGTTGACAACCGGTACGCGTGTCCTTCGGAGTCT 76139 32 84.4 0 .......................C....GCCA | ========== ====== ====== ====== ================================ ==================================== ================== 33 32 99.5 34 GTCGTACCTTATATAGGTACGTGGATTGAAAC # Left flank : TTTAGATAATTATCCGGTCTTTTTAATGAAGTAAGTTCATGTATGTTCTAGTTACATATGACGTAGAAACGATGACTTCCGACGGACAGCGCAGGTTACGTCAGGTAGCACGTCAATGCCTGAATTATGGCCAACGCGTCCAAAATTCCGTTTTTGAATGCTCTGTCTCGCCTGCTCAATTTACCGAGTTAAGATTAAAACTATCGGATATCATCGATCATAAAAAAGATAGTATTCGTTTCTATTTCTTGGGAAATAATTATTCTAAAAGAGTTGAATACATAGGTGTCGTCACATCCTATAATGTAGAAGATGAACTTATAATATAACTGTTTGCGAACATTAAGCATTAACAAAAAGCTGGAGTTTTCGCAATCATTGATTATTAGCCTATTAAACACTCCTATTAGTTTTATTTCATCAATAAAAAATCCAAAAAGTTTATTATCGCATAAATGCATTGATAACAGACTGTAAATGTTTGCATTATTTGTAATGCA # Right flank : GAAGTTGATACACGTGTCATAGCCGTCGCACCCGTAAAGGATGCGACGGTAATGTTATTGTTGTAATTCAGACACATTTCAATCCAAACGCACTATTATAACCAACTCAATCTGTAACACCTATCACATCAACAGTAGTTCCTCTACCCAAGCACCGTCCAAAACCAATCCGGCCCGTTCATCATAACACCTTCCATCTTCCAATATAAAAATCCCAGCATACACTCCCACTGTTCCCTGTTTACATAACTGTTCGAAATCCCATTTTCTAATGGATACGCTATACTGCTGTAGCTTACGTAACAACCAAAATTCCGGGCCAATCCGCTTCAGTTCCTCCAGTAAGGTTGCACCATCACCATAGCCGACCAAGATGGATACCGAGTCTTTATCGTCTATCAACCGGAACTTCTCTGCAGCAGTTGCAAACATAAAGTGCATTTCTGCAAAACCTTTATATAACAGACCTTTTATATTAGCCTTATCAAAGGTGTTACAAT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTACCTTATATAGGTACGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 86003-83927 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNDE01000014.1 Parabacteroides merdae strain BIOML-A10 scaffold14_size264276, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 86002 32 100.0 35 ................................ CGGCACCGGTGGCGGTGCTCTTTTAAATGCCGGTG 85935 32 100.0 34 ................................ AAAACTGCGGAACATAATAAAATTACGAAGCGAA 85869 32 100.0 35 ................................ GTAAGTAGTCAAACCAACAAGAGGCGCAACACCTT 85802 32 100.0 33 ................................ CTTGCTCCCTAAATGGTTGACATATCGTGAGCG 85737 32 100.0 33 ................................ TTGGATTCAGGGTAAAAACGATCTGTTTAAACG 85672 32 100.0 33 ................................ ATCTTAGTCTGAATCGGAAACATCATAGGCATA 85607 32 100.0 34 ................................ TTTAGCATAAATAGGTTGATACCCAATGTGGTCA 85541 32 100.0 34 ................................ TTATTTTCGTAGCCGAGAACAGTATTTAAAAACT 85475 32 100.0 33 ................................ GGGCTTAATACGTATAGAACTATTAGGCGGTAC 85410 32 100.0 33 ................................ GGATTTACCAGTATATGCAGGAACAAGAGGAAC 85345 32 100.0 34 ................................ AGGATTATAAGTGAGTGTAATAAAAAGAGGCGCA 85279 32 100.0 34 ................................ TTTTTTCGAAGTATCAGCCTTAATATTTTTTGTC 85213 32 100.0 35 ................................ TTAAGGCGCAGATTTCTGAAACTTGGTCTCGTACA 85146 32 100.0 34 ................................ CGGTGCTGGTGGCGCATCTCTTTTAAATGCTGGC 85080 32 100.0 32 ................................ CAAGTCCTGGCGGCATTGCGAAAAAACTCTTA 85016 32 100.0 34 ................................ AAAATCAACTTTATACGCATTGCCGTCCTCATCA 84950 32 100.0 34 ................................ TGGTTTGTCTGTTACACCCTCTGATATTGAGCGT 84884 32 100.0 33 ................................ ATTAATATCATTAATTTCGGATATCAACTTACT 84819 32 100.0 33 ................................ CGTATTAAATGGATGGGCTCTTTAAATATAGAA 84754 32 100.0 35 ................................ AATAATTTCCTTGTACGAAAAACCTCGGAATTGAT 84687 32 100.0 34 ................................ ATCCTTTCGAGCACGGATATAAGCAGAACCAATA 84621 32 100.0 35 ................................ GTACCAAGGACGCTGATAACCAAACACCGTATTTA 84554 32 100.0 35 ................................ ATCAACTTGGAAGTAAGACCATGCTTTTTGTATAA 84487 32 100.0 33 ................................ ATCCCTTCGAGCACGAATGTAGGCAGAACCAAT 84422 32 100.0 33 ................................ CATAGCGGTAGGAGTAGCCATAATGGGACCGGC 84357 32 100.0 34 ................................ CAAAGAGTACGCAAAGGAACTTTATAGAAAGACA 84291 32 100.0 34 ................................ AAATAGAATCTGATGGCTGACGGAATGAGCATAC 84225 32 100.0 35 ................................ GTCAATTTGAAAATAAGACCAGGCTTTTTGTATAA 84158 32 100.0 32 ................................ TTGCGAGAGCGCAGGAGTTTTTTCGCAATGCC 84094 32 100.0 33 ................................ TTACCAGAGTGCAGGAGTTTTTTCGCAATGCCA 84029 32 100.0 39 ................................ GTCCGTTTTAGAATACAACAGTAATAATGCAACTAATAA 83958 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 32 32 100.0 34 GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Left flank : TACTTCCAGGAGATCCCGTCTCCCCAGAGCCTGTGAAGTCATCCCACTCGTTCCCATCCGCAAGAAACCGAACAACCAGTAAATAATATTGAACAGCATCCCCCCTACCGCAATCGCCCCGATATAGGAAGCGGCCCCCAAATGTCCGACAATCGCCACATCGACCAATCCCAACAAAGGAACCGTTATATTGGATACAATAGAAGGAAGCGCTAACTGAAGTATCTTTTTATTCATTATTTATCGTATCTATAAAAACTATTCCTAACTTTGTCAGCAAAGTTACAGATTACTTTAGAAATAACATGATTACACTTATGTTTCAATAACAAAAACGCGAACCCTAAGTAATTGTAAAAAACGTTGGATGTTCGCATCCTCTATAAATCATACACTTATAGATTTATTTAGAGAATATGAACATTTATTGCTTTTCTACTTTATCATTCGCAAAATTACAATTTAAAAGTGTCATCAATAAAGCTTTTCACAAACATGGA # Right flank : CACTCTTCAAAGGCGCGTTTGAACGTGTCTTTAATGTCGCATCCTTTACGGGGACAACTATTTATAATATTTTTTGCAAGAAGATTACAGGATTAAAATATTTGTTTGTTAGAAAATAAAATATATCTTTGTTGAACAGAGTTATAAAGATACCTTATTACTCAAAGCATAAACACCTTATATTACGTTAACCTAAACATATGATATATACAAATAAAGAATACTGTCTTGAGGTTAAAGGAAGCATGGCCTGCTTTACCCGTCCGGAGATGAAAGTCGAAAGAGTTAGCTACGACATAATAACGCCATCTGCTGCCCGAGCTATTTTCGAATCTATATTTTGGAAACCAGCCATACAATGGAATATTACTCGAATAGAAGTATTAAATCCAATCAGATGGTTTTCCATGAAAAGAAATGAGATTGGAAGTTTAATGAGCCCCCGTTCATCCGGATTATTCATCGAAGATAATCGGCAACAAAAATCCAGTTTGTTACTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-1.50,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //