Array 1 18884-16696 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDF010000017.1 Clostridioides sp. ZZV14-6044 ZZV14-6044_254, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 18883 29 100.0 35 ............................. CATAATAAACTTTACAACAACTGATATTGAAATTA 18819 29 100.0 35 ............................. TCTATCTCTTCAAGATTATTAAACACTTCCATTAA 18755 29 100.0 36 ............................. ACTTTTTTATTATTATTTATAACTTATATGAGCTTC 18690 29 100.0 35 ............................. AAAGAAGTACAAAAGAAGCTTGAAACAATGTACAA 18626 29 100.0 37 ............................. TTTCAAAAGAGAATAAAAAAAGCTCATGAGTTCTTTC 18560 29 100.0 37 ............................. AAAACTTCTAATCTGAACTAAAATGCGAGGAGTATTA 18494 29 100.0 36 ............................. ATATTCTCTTGATGATATAATGACATCAAGTGTAGA 18429 29 100.0 37 ............................. TAGGTTAATTAAGCGATGTGTAGTTCACCAGAAGAAG 18363 29 100.0 36 ............................. AAAGTTGAGAAATGGGAAAGATTTTTAAATAATGAA 18298 29 100.0 36 ............................. TTCTAAAAGTAATTCATGAGAACCTAATTCTATATC 18233 29 100.0 37 ............................. TTTATTTCAAAAGTCAAGAACAAATACAACTTTTTAG 18167 29 100.0 37 ............................. TTTTATAATCATTCATTTTTTTCCCATCTAGTAATAG 18101 29 100.0 36 ............................. TGATAAAATCTCTACTTTAATTCCAGTTTTAAACAA 18036 29 100.0 37 ............................. TCTAGGTAAAAATCATAAGCCATTTATATCCCTCCTC 17970 29 100.0 36 ............................. GATACGGAAGAATGTTTATATGTTGGGAAAACAGAA 17905 29 100.0 38 ............................. CAATTATTGGGGGCATGATTTTGCTACTGAGATAACTA 17838 29 100.0 36 ............................. CTGTCTTTATCAAAGTATGCTAAATTTAACTCCTCC 17773 29 100.0 36 ............................. AAGTAATGATACCATTCAATTTCAATTTTATGAAAA 17708 29 100.0 38 ............................. TATCTTTTTCTTCTATCTCTCTGCTTTTCTTTTCTATT 17641 29 100.0 37 ............................. ATGATATGGTTCTCTAATATATGTTTGTCCATATAAC 17575 29 100.0 36 ............................. GTACTTTTGTCTTGTTGAACATTATTTTTAGCTTCA 17510 29 100.0 36 ............................. TTAGAATAAAAACTATCATATCTTTTAATGTATATC 17445 29 100.0 36 ............................. ATTGTAGTTGAAGAACAAGTTTGTGGTTATATATGT 17380 29 100.0 37 ............................. GAAGTAAAAGTAAAAAATGCAGATAAAAGTAAAAAAG 17314 29 100.0 37 ............................. TATTAAAACTACATTTACTATCTTATAAAATATTTTC 17248 29 100.0 36 ............................. GTCTATAAAACGATAATAAACTATAATCATAAAAAT 17183 29 100.0 37 ............................. TCTTGTAACACTTTAACACTAGCGTCAGGTTCATTAA 17117 29 100.0 37 ............................. CCAAAATTTTTAGTTACTTCTTTTACTAATATATTTA 17051 29 100.0 36 ............................. GTCTGTAGCATTTAATGAAACAACTTCTTTTATTGT 16986 29 100.0 37 ............................. TCTTTTAACATACTTAATTCTTTTTCTAATGCTTCTA 16920 29 100.0 37 ............................. TCATTTAAATTATTAGTTGATGAAATATTTGCGCTAG 16854 29 96.6 35 .......................A..... GCAAGAGGTAAATTAAAATTAGGACTTTTAGAAGG 16790 29 96.6 37 ....................G........ AAGAGTTCTTTTTTCTGAATAATTCATATTATAATAA 16724 29 79.3 0 ...C............A.AA...C....T | ========== ====== ====== ====== ============================= ====================================== ================== 34 29 99.2 36 GTTTTATATTAACTAAGTGGTATGTAAAG # Left flank : ATTTTATCAATGATGAAAAGTATAAAGTCTTAAAGGCATGGTGGTAAAGAATGTTTGTTATTGTTACTTATGATGTTGTTGAAGCAAGGTCATTAAATCGGATTAGAAAAATACTTAGAAAATATTTGACTTGGACTCAGAATTCTGTTTTTGAAGGAGATATTACCGATGGAAAGTTACATAAATGTATTTCTGAAATAGAAAATATTATTGATAATAGTGAAGATTCAATCTATGTTTATGAGATAAAAAATCCTAATTCAATTAAAAAGAAATGTTATGGTATTGATAAGTATTCTGATGAAATGTTTATATAGGTTTGCAGTGAGCGATATTTATGCTAAAATAGGTGTTAACAGTTGGAATATAAGGGATTGAAGGCATGTGATAACTATTATCAATTGCACTACTGATCGCTCACTGCAATTTTTAATATTTTTATTGAATTATAACTGCTTGAGTGTAGTATTTTCAATGTATTCAATTAGACATATTTTGGG # Right flank : AAAACATAAATATTCTATAAATCTTGATAAGAAAGTAGTAAAAAATGAGGTGAAATAAAATTTATGATAAGAAAATCAAATAACAAAGATATAGAAAAAATAATGGAAATCTGGGAAGAAAGTACAATCAAAGCACATGATTTTATAAATAAAGATTATTGGAAAAATAGCTACAATACTGTTAAAAACGAATATATGCCTATATCTGAAACTTTTGTATATGATGATGGAGAAGAAATAAAAGGATTTATAAGTATTATAGATAATGAATTTATAGGAGCTTTGTTTATAAGTACAAATTATCAAAGTCTAGGAATAGGAAGCAAACTTTTAGATTATGCAATTAAAGAGTATAAAAATCTAAGCTTAGCAGTATATAAAGATAATAAAAAAGCAGTTGTATTTTACAATAAAAAAGGTTTTAATATAGTAAAAGAACAAGTAAATGAAGATTCAGGATTTAAAGAATATCTAATGGAATATAGTAAACAGCTTTAGTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTAAGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 560234-560524 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDF010000001.1 Clostridioides sp. ZZV14-6044 ZZV14-6044_238, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 560234 29 100.0 37 ............................. TATACAAATGAGGCTATTACAAGTGTTACAAATGCAA 560300 29 100.0 36 ............................. AAAGAAGTTGTTACAACTTTAAAAAATAATGGTACT 560365 29 100.0 37 ............................. AACGCTTTGTATTACACTTTTTATACCTTCCCATATC 560431 29 100.0 36 ............................. TAGAGGTACATCAGATAGTATGGCAGTGTTATTCGA 560496 29 86.2 0 .....................C.AA...T | ========== ====== ====== ====== ============================= ===================================== ================== 5 29 97.2 37 GTATTATATTAACTATGTGGTATGTAAAG # Left flank : GGAGGTACAAAGTCACTAGAAAACTTTCATCAAGAGTCCACAGATATTGAGGATTCTAAATCAAGTGATAATGTACAACAAGATGCCTAGTGAGATATTAAGAATTAAAGATGAATATACTTCTTTTTGTTTCGATGAAGCTTGTATGTTTTTAGTAGATGCTATAAAAAATGATAAAAAGCTTAAATTTGAAAAGAATGAAAAGAAAACTATAGCTAAAAATGAGAGAAAAACTTTTGTCCAAATAGCATTAGAGAAAAAGAAAAAAGTTAATAGGTAAAATATTCTAAATGAATAGAGTGAATTAATGTTAATTTATGATATAATGATAATATAGATATTTTGCAGTGTACGATTTTTTATATAAATTGGATGTAATCATTGAAAGTACTATGATATAAGCATATTTTGTGATATATCAAAAACACTACTGGTGACTCACTGCAATTTTAATATTGTTTTATATGTGTAAGGATTGAAAATGCTCAATTTATTTTGGG # Right flank : TTGAATAAACGCACAAAACACCTATTTAAACATATAGGTGTTTTTAGTGTGTTTAAAATATTTTTAAATAATTGGATAAATTTGCTAAATCAATAGACTAAATTATTAATTTTAGATAGAATTATATTTGAATAAATAATTTAATGAGGGAGATTATATTATGAAATTAACTAGAAAAATATTAGCTTTGACTATGATAGTATGTTTTTCTGTAATGATGTTTGTGACAGGATGTACTAGTGCACCAGCATCTAAAATGGAGGAAGTTGGTCAAGAAATACCAAAAGAAGAGGAAGAAGTACCAGAAGAAAGCATAGATAAAGATAAATTAAATCCAGATGAGTTTTTGGATTGTCAAATTAAAGAGTTTAAAGATGGTTGGCATGCATTAGCATATGTAGAAAAAAGTGTAAATAATGGTGAAATGCCCGAAAAAGGATTAAAAACAGTTGCTGATTTGTATGAAAAGCAGTTTAGTACTTTTAATGAAGAAATTGAAA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 35489-35195 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDF010000021.1 Clostridioides sp. ZZV14-6044 ZZV14-6044_258, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 35488 29 100.0 37 ............................. CGATGGCTTTTGGAAGAAGAAAAGGAAAAATAGTAAT 35422 29 100.0 37 ............................. TTTGTACCTAGGTGTTAGTATAGCTTTTTGACACCAT 35356 29 100.0 37 ............................. AATTGTGATGGAGAACAACTTCAGAGTGTTATAAAAA 35290 29 100.0 38 ............................. AGGATATAATTTTTTATCATCAATAAATTCCTTTTATC 35223 29 79.3 0 G...................A.AAC.G.. | ========== ====== ====== ====== ============================= ====================================== ================== 5 29 95.9 38 CTTTTATATTAACTAAGTGGTATGTAAAG # Left flank : TAAATAAACAAGATAATATTATCGAAATTTTTACTAACGAAAACTCTTATTGTATATATCTAAAAGCTTTAAGCATTGAAAGTGAAGAATATCTAATAAGTAGACTAAAATCATTTTTTTGATTGTATATATTTTATAAGTAGAAAACAGAGTAGTTAAAACTACTCTGTTTTTGCAATTAAAATTTAAAAATGCATTATAGCTAAAGTGTATATATACGTTATAAAATAACTTATAAATAAAATTATTGATAATGTTTTAAAAAGTTGTTTTCTATATCTAATTTAATTATCAAACTGAGATTCTTATTAGATAAATTATGTTATAATAAATGTATAAATATGCAGTGTTCGATATTTTGAAAATAAAAACTGTAATGCTTGTAAACACTGCGTTACAAGGTGTTTTTGGAAAATATCAAAAAGCACTACTTGTGGCTCACTGCAAATTTATATATTTTCTATATCTTAAAGTATTGAAAATGCTCAATTTATTTTGGC # Right flank : TGGTTTTAAACTACTCTGTTTTTATATAAAGTAAAAATAGAAATATAAATTAAGAAAGAAGTGTACATATAATTTATAAAATAAATTAAATAATAACTTTTATAAAATGTATATATAAATTTAAATAATTTTGGTTCTCTATACTCAGTTTATTTAATAAACGAAAATTTTTATTAGATAAATTATGTTATAATAAATATATAAATATGCAGTGTGCAATATTTTAAAAATAAACACTGTAATGCTTGTAAATACTGAGTTACAAGGCGCTTTTGGAAAATATCAAAAAACACTACCTTGCGCTCACTGCAAATTTTAATATTTTCTATATCTTAAAGTATTGAAAATGCCCAATTTATTTCGGAGTTTTATATTAACTAAGTGGTATGTAAATAGTTCATCACGTAATATTTTCAAAGTGGTTTTTTCTGTTTTATATTAACTAAGTGGCAAGCAGAGTAATTTTTAATTGCTCTGTTTTTTATTTACAAATTTAAGAT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATATTAACTAAGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 8968-8208 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDF010000006.1 Clostridioides sp. ZZV14-6044 ZZV14-6044_243, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 8967 29 100.0 37 ............................. AAAAATTTAAAAGTCTAAATACATCCTCTATATCTTT 8901 29 100.0 38 ............................. GTTATAGCAGAAATGGTAATTGGTCTAGATGAGTCTGG 8834 29 100.0 39 ............................. TTTAGAATATTTTCATTATCTATATCATTTAATTCAAAG 8766 29 100.0 37 ............................. AGAAATTAAAAAAAGATAAAGTAATCTAGTTTAATTA 8700 29 100.0 37 ............................. TAATGAAGTACAACAGAAGATGTGGTGCGACAATAGA 8634 29 100.0 37 ............................. CAGCAGATATAGAACTAGAAGATTTAGGAACATCAGA 8568 29 100.0 37 ............................. TTTATCAAATCATTAGATAAAAATAATTTGGAGGAGG 8502 29 96.6 38 A............................ AAATACTTAATTTAAAGCAAGTACCATGTTTAGTGCTA 8435 29 100.0 37 ............................. TGTTTGGATGCAGAAAACATACTTGATTATGTTCAAG 8369 29 100.0 37 ............................. TTTTTAGTAGGATGTTTAAATTGGTGGTGGTCACCAA 8303 29 96.6 37 ............................T GTAAATTTATTTGCTAGAAAGTCACAACTTAATTTCG 8237 29 86.2 0 ...............A......AT.T... | G [8216] ========== ====== ====== ====== ============================= ======================================= ================== 12 29 98.3 37 GTTTTATATTAACTATGTGGTATGTAAAG # Left flank : CTTACCTTTAAATATACTAATAATAAGATTAAATATAATAAATCCAACCGTTGAGCCCAAAGCACTAACAGGTACTGATGATATATTAGAGAAATTATTCAATGCTGATAGACATAACATTACTATAGAAACTATAACTAAATAAGATATGACTGTAAAAAATGGAATTGAAATACTTATATTTAACTCTGCTTCATATTCTTTCATAATATAATTCCTTTCAAATTAATTTTATTTAACTTTATTATAGCATTTAAACATAATTAAATGTAAAAATACAGTCAGAAATTAACTAAAAATATCAATTATATGTTATGATATAATAAAAATATAAATAGTTTTGCAGTGCGCGGTATTTTTGATAAAGTGTGGCTTAACAGTTGAAATATAAGGCATTGAGAACATATGATAAGTGTTATCAATTGCACTACTCATGGTTCACTGCAAATTTGAGAGAGTTGTATATATGTAAGTATTGAAAATACTTAGTTTATTTTGGG # Right flank : AAGTTACAATGAGTAGAAGAAGATTTCTATTTATTGTAACTTTTTTATTGCAAATTTAAAATTATAATATATTATAAAAATCATTATAAAAAGATGATTTAATAAAAAAATATAATTAAAAACTTGATTAATAATATATTAAATTGTAAGAAATATCCAACTGTCTACAAAATCTGAGTTTTTTATTACAATTACGAGTTTTTTATTGCATTTGAAAAATAAAAGTATTATTATAAAGGTAAGATAATTATCAAAGACAATTCTGAATAATCTAAAAACATTTCTAGAAATGAAAGGGTATAATTACATAAGTTTTATTAAAATTTATTGGGAGTTTTTAACTAAAAATAAGAACGTAAGTTCTTGTAACAGGGGGATAGTAATATGGAAAATGAAAAAGACAAACTCATCTTATCTTTAATTGAGTTGAAAATAAAGGATGAAGAAGATTATGAACTCTTTGCAAAAATGATTAAAGAAATTTATGAAAAAAATATAAG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 18964-20364 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDF010000004.1 Clostridioides sp. ZZV14-6044 ZZV14-6044_241, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 18964 29 100.0 36 ............................. TGTTTTAAATCCTGTTTATTAAGCTATTAAACATAT 19029 29 100.0 36 ............................. TTTAATTTCTTATTATGTATCTCTATACCTTCTGCA 19094 29 100.0 37 ............................. AGACTCAGAAACAATATCTCCATAAAAATATAACTCA 19160 29 100.0 37 ............................. GATAAAAGATTCGACAGACCTTTAGACTTAGATACTT 19226 29 100.0 38 ............................. AATTTTTACATAATTAAATTATAAAGAAGTCATGACTA 19293 29 100.0 36 ............................. AATGTAAACAAACTTTATCTTTGGACTGAAAGAGGA 19358 29 100.0 35 ............................. TTTAAGGGAAACATTTAGAGGAGGAACTAAAATGA 19422 29 100.0 36 ............................. ATAGAACCCCATCTGTCAAAACCTATCTCTTGAGTT 19487 29 100.0 36 ............................. TATCTACGTCTAAGTCTCTTATTAATGTGTGACCGA 19552 29 93.1 37 ...............A............T ATACGACTCACTATTTGTGCAGTATCTAAGTAAGATG 19618 29 100.0 36 ............................. AACATCATCAAAAGCATTGCGGATTATCTTGATGTC 19683 29 93.1 36 ...............A............T TAAAAAAATCCATTACGAAAAAACTTATTAAAAAGT 19748 29 96.6 36 ............................T TTGGTGAAGCTGTCTTGCCTCTTTTAAACGAATTTG 19813 29 96.6 36 ............................T ATTAGTAAAATTACTATTACAACAACTACTATGTTA 19878 29 96.6 36 ............................T ATAAGAGTAGTTTTAAGAGTAGTTTAAAAAAATAAT 19943 29 100.0 37 ............................. TACACTAATACCCCAAGACATTATTTTCCCTAATGCA 20009 29 100.0 36 ............................. TATCCAGATCCACCATTATAACATGCAAAGGAACGT 20074 29 96.6 37 A............................ AGAGAAGGACTTTAGAAAATTGCATAATACAGGTGAA 20140 29 86.2 37 ......G.........A...A.......T TGTGATTGGTCTGTAAAGAAAGTTACAAGATTGTTAG 20206 29 86.2 37 ......G.........A...A.......T AAAGGCAGTAGAATAACTATAAGATTGGATGAAGAAT 20272 29 93.1 37 ...............A............T TAAAACATTCTTTGCTAGTTCTAAGTCATTGTCTGTT 20338 27 82.8 0 .............A......-.-.A...A | ========== ====== ====== ====== ============================= ====================================== ================== 22 29 96.4 36 GTTTTATATTAACTATGTGGTATGTAAAG # Left flank : ATGTAGTTTATAAAATTGAGTAAATTCTATTGTATTAAATAATTTAGTTTAGTTTATTTTAGTTTTGAGGGGGATTAATACAATGATTGAAGATTTACTTAATGAATATAATATAAAGGATGATAAAGAGAGAGAAAAGTTTATAAAGTTTGCTAATTTACTATATGAACTACAAAAGAATAATAAAGAAAAGTTTCAAGAATTAACTAATATAATAAATAAACTTTATGAGAAAAAATTAGAGAAAAATAATGATTAAATAGACATATAAAGCACTTGAATATTTCACTGTTTCAAGTGCTTTATGTAGTAAAAAATGATATAATATAGGTAAGAGTTTTGCAGTGTTCGATTTTTCTACTCAAGTATAGTTTAACAATTGGAATACAAGGCATTGAGAAGGTTTGATAAGTGTTATCAATTGCACTATTGGTCGCTCACTGCAAATTTAAGAAAGTTATATATGTGTAAGTGTTGGAAATACTCAATTTATTTTGAGG # Right flank : ACTAAATAAACAAAGAAGCACTTACTTAAATAGTAGGTGCTTTTGTTATTCTTTGCTAGATAAAGTAACAAGTTCGTTAGGTGTACATTCAAGAACAAGACAAAGCTTTTCGAATAAATCTAATTTTATAGAACTTGTTTCATTGTTAGCTAATTTCATCATGTTAGGATAAGCTATACCTACTTCTTTAGCTAACCAATATCTAGTTTTGCCTCTTGATTCAAGCAATTTATCAATATTAAAATACATTTTTTCACCTCTTAAATATATTATACATTGATTATATAATGTTTGCAATATATAATATGCAAATAATATAATTATATAATGTTGACATTATATAGTGTGTACGATATAATATACTTAAGGAATAAAAAATAAGAGCCACTCGCCCCTACCAAGTTTGAGTAACTCTTATTGACATATACTACATATGCATTAATTATAGTATATGCCATTCCTTAAAAAAAATCAATTAAGGAGTGTGTTTTTATGAACAA # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 22086-22504 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWDF010000004.1 Clostridioides sp. ZZV14-6044 ZZV14-6044_241, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 22086 29 100.0 36 ............................. TGACACATATTGCTAGCAATTCTGATGCTTCAGAAC 22151 29 96.6 35 ................C............ TTACAATATTCCAAGCTGCTGCGAATACATCATAG 22215 29 100.0 37 ............................. AGAAAATAGAAAGCTCCCACAATTACTCCAGTTGCAG 22281 29 96.6 36 ............................G GCTGGAATTAATGCGACTACAGTAGAAGAAAAGAAA 22346 29 89.7 36 A..............A............G GTTCTAAAAACATTTGCTATTCCAACTACACAAATA 22411 29 89.7 37 A............A..............G CGTATTGCTATGTTTGCTCCATCTATGAATGCTTTCC 22477 28 86.2 0 A...................-..T....A | ========== ====== ====== ====== ============================= ===================================== ================== 7 29 94.1 36 GTTTTATATTAACTATGTGGTATGTAAAT # Left flank : CAATCAAAGGAGACAAGAAAAACTACTATATATTGTATAAAAATAATTAGATTTTAGTTTAGTTTTGAGGGGGATTAATACAATGCGTGAAAGTTTACTTAATGAATATAATTTAAAAACTGATGAAGATGTAGAATACTTTGTGAAGTTTGCTAATGCGTTATATGAACTAAAACAGAATAGTGAAGAAAAATTTCAAGAATATGTAGAGATATTGAGAGAAATACTTAGAGAGCAAGAAGAGAGAGAAAATAAGTAAAATAATATAGATAAAGCACTTGGATATTTCACTGTTTCAAGTGCTTTATTTGGTATAAAATGGTATAATAGAGATAAAAGTTTTGCAGTGTTTGATTTTTATGTTTAAGTATGGTTTAACAATTGGAACACAAGGTATTGAGAGTATACGATAAGTGTTATCAATTGCACTATTAGCCGCTCACTGCAAATTTAAGAGAGTTGTATATGTGTAAGTATTGAAAATGCTAAGTTTATTTTGG # Right flank : ATTAAAAATAATAAAAAACACTTACTTGAATAGTAGGTGTTTTTTAATTGAAAGGATGTGATTATAATGTAAAAATTTTACTTATATAGTATAATATTGCTATAAATTCATTATAATAAAGGGGGATATTATGGGATTATTTAGTGGAAATGAAAGTTGCTGTATATGTGGAGAAAAAGGTAAACAAAAAATATCTGATGGTGTAATATGTTCTGAATGTTTAAAAAAATATAAAGATACATTTTCTATAGTTGAACCAACAGATGTAATTAAAAAAATATCTTCTGAGGAAATAAAAAAATCAATAAGATTAACACTCGAAAATAAAAAACAATTTGAATCTTTTAATGCAAGTAAAAAAGTAGGAATTTATTTATTAGTAGATGAAAATAAAAAACAATTAATTATGTCTGATAAAATAAGCAATTTAAATAAGAATAAGAGAGTATATGACTTTAGGGATATTATTTCATTTGAACTTTTAGAAGATGATGAATCTA # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.48%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //