Array 1 96897-94867 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGBM010000010.1 Pseudomonas sp. OF001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 96896 32 100.0 34 ................................ CGCCAGCGGTGATCTATGGCCACTCAAGTCGAAG 96830 32 100.0 35 ................................ CTCCCTGGCGTAGTAGGTGCAACGCACCACGAAAT 96763 32 100.0 33 ................................ GATGCCTTCACCAACCACAAGTCCACCACCGAC 96698 32 100.0 34 ................................ ATCGCGGGGCTCGGTCGCAAGATCATCGGCGCCG 96632 32 100.0 33 ................................ AACGAACAACTGAGCACCCTCGGCGCCGTGTCC 96567 32 100.0 34 ................................ CAGATGGCCATGCGGTCGAAGCTCATCAGTGCAT 96501 32 100.0 34 ................................ TGGTAATCCTCAAGGGTGATGCCACCGGACCTGT 96435 32 100.0 35 ................................ GCCGGCGGAGTCGGCACCGGCATCGTCGGCGGCAA 96368 32 100.0 35 ................................ CAATGCGGTCATCCTCGACCCGCAGCCCGGCGATA 96301 32 100.0 34 ................................ GCTTCAACCATGAAGGGGTCGGGATGTGCGTGAT 96235 32 100.0 34 ................................ AACACCATCGAGCGCCGCCTGGCTGCCGAAGGCG 96169 32 100.0 35 ................................ ATGGTCGTTTCTCCTTTGCTGCCGGCCCCAATGGT 96102 32 100.0 34 ................................ ACCGAGTACGCGCCGACGATCAATCAGACCATCC 96036 32 100.0 36 ................................ GGCATCTTGATGATGAGGGTGTTGCCCCACAGGCCA 95968 32 100.0 35 ................................ GGTTAGCATGACGCTGGATGGCGTCACAAACCCGA 95901 32 100.0 34 ................................ TGATCATCGCCCAGGGCTATGCGACGCTGTGGAC 95835 32 100.0 36 ................................ TGCAGTCCTTCCGGCTGTACCTGGGCGGCTGGGATC 95767 32 100.0 34 ................................ GCCCTCTGTGAGTTTGAACACAACAGAACCACCT 95701 32 100.0 35 ................................ TTCGGATCGTACCAAATTTCAATTGCCCAACAACC 95634 32 100.0 36 ................................ CTCTGCTCCACCTGCGTCTGCTCCTGCAGGCCGGAG 95566 32 100.0 36 ................................ GCACGCAGAAGGTTCGCACTCTGGTTCGCACGCAAA 95498 32 100.0 35 ................................ ATGGTTGGCTCCAGAGTGGGCGAGGGCGGCGCAGC 95431 32 100.0 35 ................................ CGCGCCTGGGGTCAGGACGGCGTGGAATGCGTTTC 95364 32 100.0 35 ................................ TTGCATCTGCCCCGTCGTCTCGAGGAGGTACAACA 95297 32 100.0 34 ................................ GCCTGGATCTTGCCGGCCAGGTCGCGCTCCCAGC 95231 32 100.0 34 ................................ CACCAGGATCTGCGCGAGCTGCTCAAGGCCGCCC 95165 32 100.0 36 ................................ GACCTCGGCCCGCTGCTCGAGGGCATCGGCATGGAG 95097 32 100.0 35 ................................ GGCCAGCACGCCGAGGGTCAGGCCGAGAACCAGCC 95030 32 100.0 35 ................................ TGGAGCGCCCAATTCCACTAGCAGGCCCCTGCCTG 94963 32 96.9 33 ...........C.................... GATTGACGGCCAATGCGGCAGCGGCTGCACCGT 94898 32 84.4 0 ........C..C....CT...C.......... | ========== ====== ====== ====== ================================ ==================================== ================== 31 32 99.4 35 GTCGCGCCTCATGCGGGCGCGTGGATTGAAAC # Left flank : CCACCGTTTCTGTGGAAGTGAGGTGCCGGGCATGATGGTTCTGGTGAGCTATGACGTCAGCACCGAAGGAGACGGCGCCCGGCGTTTGCGAAGGGTTGCGCGGGCTTGTCTGGACTACGGGCAACGAGCGCAGTACTCGGTATTCGAGATCGAAGTCGATCCGGCGCAATGGGCCTTTCTCAAACAGCGCCTGTGCGACCTGATCGATCCGGAAGTCGACAGCCTGCGCTTCTACTATCTGGGGCGGAACTGGCAGTCCCGCGTGGAGCATGTCGGGGCAAAGCCGGTGCTCGACCTAAATGGTCCCTTGATCCTCTGAAGCCTTTGCGAACCCCAAGCGACCGGCGAATCCCCGGCAGGTTCGCAGCTATTTAACAATTTGAATTCATTGATGTTTTTCGATGGTCTGTGGATGAAGGATCTTGATTGCGCGAAGTGTTTTGGCGGTTCGCGAATCCACGCTGGTTTTCTTAATTGAATCAATGAGTTATAAGAACGTG # Right flank : AGGCAGTAGTCCGCGCCACCGTGCAGCTGATTGGCTTTGCTCCCCGATTGAAGCACAGGATTTGCGAACGAATTGCTCAAGGCCGCGTTAGGAAGGCACTCTTGGAGTTGATCTTTATCAGGGCAGTCGGTACTTCTTGTGGTTAGCGCTTTCCCATCGACCGCCGCGTACCGCGCGGGGCCATGCCCGGGCGTTTGTCGTGGTTGCACTTGTTGTTGCGCTGGTGCCAGGGCTGACCGTCGTCCTGCTTCGGAGCGTAGGTTTCCGGCGAGAAGGGGAAGCGGAAGGCGGGGATGCCGCCGCTCTGGCCGGCTTCGGTGCCGGTCGGCTGGGCTTCGCAGGGTGCATGGGTGTCGGGGGTGTTGGTCTTCGACATGGTGTATCCGGTTCGGCGTTGGGGAGGCTCTGGTCGGCCAGACCTCGGTGCGGCACGCATTATACCCGGTCGTGATGCGTCTGCCGTGCCCTCCGCTGCGGTCGCCCGCCGCCGTGCGGCGGCA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCATGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.80,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //