Array 1 14050-15535 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAESMI010000013.1 Staphylococcus sp. GDX8P80P GDX8P80P_contig_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 14050 36 100.0 30 .................................... GTGGTAACGTCTTAGAGTTCAAGCCAACTG 14116 36 100.0 30 .................................... CAAAAGGCGTTAATGCAATGGCCATGTTTG 14182 36 100.0 30 .................................... GAGCTTTCATTTTGGAATGGTGGGGATTGG 14248 36 100.0 31 .................................... ATACGACCATTACCAAACTTAATCACTTTCA 14315 36 100.0 30 .................................... AAGCACTTCCACGATTTATGGCGAGCAACG 14381 36 100.0 29 .................................... ATATGAACTTGCTAATTTTTTTGAAGTTA 14446 36 100.0 30 .................................... TTTTGCGTAAAATGGACGAATAAACCACAT 14512 36 100.0 30 .................................... AAGCAGAAAACAAGCCTGTATCTTTTAGCA 14578 36 100.0 30 .................................... GTGAAGTTGGTAAAGACGGGCAATCTAAGA 14644 36 100.0 30 .................................... TAGTAGTATCAGTACAAGGTTTAACTGAGT 14710 36 100.0 30 .................................... TTAGTCTAATTCTAGCAAATAAGAATCTAC 14776 36 100.0 30 .................................... CAGAACAAACGATTAATGAGCAAGAATTTA 14842 36 100.0 29 .................................... TAATCGTGTCGATGACAAAGTAGGTAAAG 14907 36 100.0 30 .................................... CATTGATTAACGCTGAAATGAGTATGAATG 14973 36 100.0 30 .................................... GATGCTGAAAGTAAAGATGTAGAAGTAACA 15039 36 100.0 30 .................................... AAGGCACGTATAGGTTCCTGTCGTATTCAG 15105 36 100.0 29 .................................... TGAGTATGACGTAGAATTCGCTAACTTAT 15170 36 100.0 30 .................................... TTAAGGAAGATGAAGAGTCGTTGTTTGTTA 15236 36 100.0 30 .................................... AGACGGTTATCACTTTATCCACGACAAGTA 15302 36 100.0 30 .................................... AGGTAATTCAAGAACGTTTAGGTCACAAAT 15368 36 100.0 30 .................................... AAAAGGGTTTGCAGGAACAACACAATTTTG 15434 36 100.0 30 .................................... GATTAACTCGTATCTTTCTCCACTTGTAAT 15500 36 88.9 0 ...............G......A...........CG | ========== ====== ====== ====== ==================================== =============================== ================== 23 36 99.5 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC # Left flank : GATGCAAACATAATTGTATTAACAGGATCATTACATTTTCTATCCGAAGAATGGAAATACAATAACTATATAAGAGATGGTAAGCAAAAAAACACATCTGAATTTCTGGAAGAATTAGAGTGGAATGCACCACTTAATTTTGATAAGAGGGATCTAGAAGAAAGTTTGAACCGATTCATTTTAACTTATCAAGATAAATTAGAATTAAATCCCATAATATCTAATTATCAAATAGCACAAATTATGTTATTTAGTGCTATTGACATATATGTTGGAGTTTCATATATGCAACATTGTAATCACAAATTTGAATTGAAAATTAAAAATGAATTACTGCCTAAAAGCATCAATAAATATTTAAATCAACAATCGTTGAATTAATTACTTTGCTATAATTAACATAATAATCTATTATTATCTTAGTGAATGAGTTTAGCTAACTTGTTCACTGAGATACCTTTTTATAAACTAATTCTTTTAGCGATTTTATATTGCTAGAG # Right flank : GATACATTGATGCTACACCGCAAGATTGAAGTTTTAATACGCTAGTACTTTAGGCACAACTATTTTAAATAGCGATTATTAAGTGCTATTACTTGCAAATTATTTGATTAAAGTGATTATCTCAATAATTACGCCGATCCATTGTTACTTTCAAATAATCCATAATATTGAAATTAATTATTGGGGGGAAGAATGAAGAAATATTTAATATTAATTAAAATAGTAGTTGACTAACATGCTAAGGTAGAAATATAATAAACGTAAGGAACAAGTTTAGCTAACTTGTACTTATACCTAAAATTACAGAATCTACTAAAACAAGACTTTATGTCGTGTTTATCCCATTAATTTATTAATGGGATTTTTTCTTTATAATTAGACAAAGAGGCTAGGACATAAATTATATAGGTTCTATAATAAATTGGACTGATGACTAAAATCATCTGTCCAATTTTTATGTTTTGAATACAAAAATAGCGCAATTACCTCTATAATTATTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //