Array 1 226520-227829 **** Predicted by CRISPRDetect 2.4 *** >NZ_RPBY01000003.1 Cronobacter dublinensis strain SD69 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 226520 29 100.0 32 ............................. ATTACTTTCATCATCATTTTGTCCGGGTGTGG 226581 29 100.0 32 ............................. CATGTGGAAATCCATCTACGGCGACGAGAGCT 226642 29 100.0 32 ............................. CGGCGGCGCAGCGGCAGGCGCGCCGCATCGGT 226703 29 100.0 32 ............................. CGGGCTGGAAATCAGTCGGGCTGCGCGTGGCG 226764 29 100.0 32 ............................. CGCTTGTCAAATAACCAGGGAATGCGCATTTA 226825 29 100.0 32 ............................. TACCTTTGTTTTATAATAGGCCAGAATTCAGA 226886 29 100.0 32 ............................. GTTTTTGGCGGTGGCGCTGCTTTGTGGTGTGG 226947 29 100.0 32 ............................. TTTGGTGCTGGCCAGCGGACTTTGCTGACCGA 227008 29 100.0 32 ............................. ATTGCTGATTACAACGATTTGGGATGTGCAAA 227069 29 96.6 32 ............................A AAGCTCGGCGAAAATTACTGACATCATCGCGC 227130 29 100.0 32 ............................. TTCCAGAACTCGTTACCCAAATGGACGGGGAA 227191 29 100.0 32 ............................. TACCGGGTCAAATACGCTGGTCTTTACCGGTG 227252 29 100.0 32 ............................. CCTGCAGGCGCTGGCATCGCTGCATAAATTAC 227313 29 100.0 32 ............................. CGCCGCGCAACGACAAATCGCGAGTTAGTGAC 227374 29 100.0 32 ............................. GCTGCACGAAGACGTTTTCGCTATTGCCAAGC 227435 29 100.0 32 ............................. CCAGAATTTGCGGAGAACTTCTCCCTGGCGAT 227496 29 100.0 32 ............................. GATATTTCCTCAACGTTGTACTCTGAGGGTTG 227557 29 100.0 32 ............................. AGGGTGAATGTTATTACCGCTCTGAGGCGCTT 227618 29 100.0 32 ............................. CCGACCTCTCTCCGCCGCTGTTTAATTCTCTG 227679 29 100.0 32 ............................. TGACGTTCAAGCGCGGCATAGTGCGGCGCGCT 227740 29 100.0 32 ............................. TGCAAACAGGCGCTTAAATTCTGCCGCGTACA 227801 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ACGAAAGCTTTAAATGGATGATGGCGCACAACATCGCCTTTATTGTCGTCAATATCAACATCAACTATCGCCGTCCTGCGGTGCTTGGCGACGTGCTGACCATCACCAGCGAGATGAAACAGCTCAATGGTAAAAGCGGGGTGCTGAGCCAGGTGATTACGCTCGGGCCCGAAGACGAGGTGGTCGCCGACGCGCTCATCACGTTCGTGTGTGTCGATCTTAAAACCCAGAAAGCGCTGCCGATTGAAGGCGAACTGCGTGAAAAACTGGAAAATATCACAGGGTAAATTCTGCAATCACGCTGCCTGTGCGTGTAGTCATGGACTTCCACTCACCGAAAGCGAACAATCCGGTAGATGTTACCGGCCCGAAAGCACGCTGAAAAAAGGCTTTTAAAATCAACAGGGCAGCCGCTCTTTAACAAGATGGGTTGTGAAGTAAATGTTGGTAGAATGTTGCGGTCGATAAAAGTTCAAAGAAAACAACAGGTTGTTTTTAGA # Right flank : GAACCAGTTTGCCGCGGCGCAAAAAACTCATCTCTGTCACTCGTGCCAGCCCGAATATCCAGCTTAACCACCCGGCAGGGCAACCCCTCCCAAACCCCATATTCTTCAGCGGCGTTTATACTTCAAAGCCAACATGAAATTTCGCAACACTGCGCAACGAAGGAGAGGCTATGCGGGTACACCATCTTAACTGCGGTTGTATGTGTCCTTTGGGCGGCGCGCTGTATGACGGCTTCAGCAAAGGGTTGCACGCGCATCTGATTTGCCACTGTCTGCTGATTGAAACCCAAAATAATGGACTCGTGCTGGTGGATACCGGCTTCGGCTGCGACGATATGCGCCATCCTGGCCGTCGTTTGCCCCTCTTTTTCCGGGCGCTGAATAACATTCAGTACCGCGAATCATTAACGGCGCTGCATCATATTAAGGCGCTCGGTTTTAAGCCGGAGGATGTACGGCACATTGTGCTGACGCATCTGGATTTCGATCATGCAGGCGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //