Array 1 69586-71944 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADOZZ010000003.1 Streptococcus salivarius strain 1001095IJ_161003_D10 NODE_3_length_197075_cov_16.9421, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 69586 36 100.0 38 .................................... CGCCACTTGAAATTAGATTACGGAAAATTTGCACATTT 69660 36 100.0 36 .................................... CATAAGAGCAAACATATAGAATATCACTTAGTTTCG 69732 36 97.2 38 .....................C.............. TGTTGTGCTTCTGTCAATTCTGCGAACGCTTTACCAGC 69806 36 94.4 35 .......C.....T...................... AGTCGTTTGTGAATACGTTAATCCCTACAGCTTTT 69877 36 94.4 36 ........T....T...................... TGCACGAACAATATTGTTTTTGTAATCGTAATCTTC 69949 36 94.4 34 ........T....T...................... ATCTTTGTAGCTCCCTTTCTTTATCTTACATATC 70019 36 100.0 36 .................................... TTGGAAAAACTGTTTATAAGAGCCTTTTTTGTGCGT 70091 36 94.4 37 .............T.......T.............. ACAGCATTTACAAGCTTAGTCTTGTAGTACAAGTAAA 70164 36 91.7 36 ............AT.......C.............. GCGTAAAATGCAAGCCCATAGTTATTTTCTTCATCT 70236 36 94.4 36 .............T.......T.............. TTCTTAGTCCAATGACTACGTGGGGAAACTCTCTCA 70308 36 97.2 36 .............T...................... GTGCCGTTGAAGTTTACGGTTACTGGTTTACCTGGT 70380 36 88.9 32 .................T...C.......A....G. AGCCTGGCGAGCTACCCAACTGCTACTACCCT 70448 36 86.1 37 ......C.T....CC......C.............. CTAGACCTAATTCGATTTTTCCTTGATTGTTTGCCAT C,TG [70449,70452] 70524 36 86.1 35 .............CC...CT...C............ TATTTGTCTGTAAGTTTGTAACTTGAAATGTCATT 70595 36 97.2 36 .....................C.............. AAACGACCAGACAAAACGACATTATTCATAAGATTT 70667 36 91.7 38 .............CC.......T............. TCACTAGCTTTTTCCTACTGATATTCGTTCCTCAAAGT 70741 36 91.7 38 .............TC................A.... GATGTCAAATCAGAAAGTGTCGATATATCCTCTTGACT 70815 36 97.2 37 .....................C.............. GATTACCTTACGACTCAGATTTTCAAAACGTTTATTA 70888 36 91.7 36 ............AT.......G.............. ACATTACGCTTGTTTTGTTGCCGTAATAAATTCTGA 70960 36 91.7 37 .............C...........T......T... TTCTTCTTCTTGAGTTTCTACGTCATTCTTTTCGACA 71033 36 94.4 36 .............C.....T................ TGATTATTTTGATAAAAGGTTAAACCAACATCACCG 71105 36 97.2 39 .............C...................... GCAAGCGACGCTGACTGAGCAGTCTTTCCATAGAGAGCG 71180 36 86.1 38 .............CC......G...A......G... AGCATATTACTGTTAACTAGTTCTTTAAGTTCACTTAA 71254 36 94.4 36 .............T.......C.............. TGATTTTTAAATCTTCCTCATAGCGTTCTTGATTAG 71326 36 94.4 35 .............TC..................... TGTCTGTTCATTGTAACCGTTGTTCCCAAGTTACC 71397 36 88.9 37 ............CCA.................G... ATATTTTTTTACCTGATCGGGCTTTTCTGCTAAGAGT 71470 36 91.7 37 .......C.....TC..................... AGGTCTAAGCGACAATCGCTATCAAAATTAGTACCGT 71543 36 94.4 38 .............T.......C.............. GAAGTCGAGATCACAACATCACTTGGCTTAGTGTAATC 71617 35 86.1 39 .............T..-....G...A.........G GAATTATTTTTTCCATAAAACAGAACATGGGTTCGAGAA 71691 36 69.4 38 A.G.....AT....AG.....CA...A...A.T... ACCCAACTAGCGAAATCATAGTTTTGTGGTTTGTTCAG 71765 36 97.2 36 .....G.............................. AATAGCCCAGATTGCTCTAAAATCCACTCGAAGACT 71837 36 77.8 36 ..A...C......TC....T.CA............A TCGCTTGGTGTGACTGTCACGTTGCCAGCGTTGTCA 71909 36 72.2 0 .......T.A...C...............TTTTTTT | ========== ====== ====== ====== ==================================== ======================================= ================== 33 36 91.7 37 GATATAAACCTATATACCTCGAGAGGGGACGGAAAC # Left flank : AAGAGTTTATTAGGGCTTTTAGAGAACTTGACCCTAGTCTGTATGAGACAAGTTACACAGGAGGGCATTAATGGGACTTTACTTTAATCTCAGTGAAGAAGAACGTGAGTTTGCCAAACAAAAAAACATGTTTTGTCTGATTATTTATGATATCCGAAGTAACAAACGTAGACTTAAACTCTCCAAATTACTTGAGGGTTATGGTGTGAGGGTGCAAAAATCCTGTTTCGAGGTCGACCTGTCAAGAAATGACTATCAGTCTCTTCTTAATGATATCGAGAGCTTCTACAAGGCTGATGAAGAAGACAGCATAATCGTATATGTGACAACCAAAGAAGAGGTGACTAGTTTTAGCCCCTACCATAGTGCTGAAAAATTAGATGACATTCTCTTCTTCTAAGCCTTTATAGGCCTGCAATCATATGGTACAATATAGATAGTGTTTCCAGTAGGTCCTACATCTTGTGTCTCTAGCAACTGTCTAGGGCACAAGATATGGG # Right flank : TGAAAATTTTGAAAACAGTCTTGACACCGCTTCCAGAAAGTGTTAGACTAAAAGCACATTAAGGGCGCCCCAATGAGGTGAAAAGTACTTTCAGCTTTTGGGGTTTTTTCATACAAAGATGAGGGAGTCAAATGAAAAAATTAGTACTTACTTTTAAAAGGATCGACCATCCTGCACAAGATTTGGCTGTTAAATTTCATGGCTTCTTGATGGAGCAGTTGGATAGTGACTATGTTGATTATCTGCATCAGCAGCAAACAAATCCCTATGCGACTAAGGTAATCCAAGGAAAAGAGGACACGCAGTGGGTTGTGCATCTGCTCACAGATGACCTAGAGGATAAGGTTTTTATGACCTTATTACAGATTAAAGAGGTGTCCTTAAACGACCTGCCTAAACTCAGTGTCGAAAAAGTTGAGATTCAGGAGTTGGGGGCAGATAAACTGTTAGAGATTTTCAATAGTGAGGACAATCAAACCTATTTTTCAATCATTTTTGAG # Questionable array : NO Score: 4.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.13, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATATAAACCTATATACCTCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [11-54] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //