Array 1 9150-13681 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAIM010000006.1 Leeia aquatica strain IMCC25680 NODE_6_length_18601_cov_63.938941, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9150 28 100.0 32 ............................ TCGTCAAGACCCATACCAAGCAGCAGAAATGC 9210 28 100.0 32 ............................ AGTTTGCGGGCGCGGGCGGTGGCCACTGCCGG 9270 28 100.0 32 ............................ TCATCGCCCATGGCCGCAATCGCCGGAGCCAC 9330 28 100.0 32 ............................ GGTGACCGCACAGGCAACAGTGATTGCGCCCA 9390 28 100.0 32 ............................ CGAAAAATCGAGCCCGTTGACGCGCAGGCTCA 9450 28 100.0 32 ............................ TGGGTGGTATGGCCGTCAACGTTCTTGCACAC 9510 28 100.0 32 ............................ TGGATCATCACCAGCATCCGCATGGTGCGGGC 9570 28 100.0 32 ............................ TCATTACAACAACATCCACCGGTGCGTAACCG 9630 28 100.0 32 ............................ TGCTGAGCAGAATTTCCTCGGGGCATTGATGG 9690 28 100.0 32 ............................ TTCAGATACACGGCCAGCTTTGGCTTGAGCGA 9750 28 100.0 32 ............................ TTCGTGTACTTGTCTACGTAGGCGTACCACGC 9810 28 100.0 32 ............................ AGAATGGATGAGAGAGGAAGCGAGATGATGCA 9870 28 100.0 32 ............................ TCAGCAGTTCAGACGGCTATTTTGACGTAGGC 9930 28 100.0 32 ............................ GTCTGGCGATGGTGGCTTCAAGACGACTCGTT 9990 28 100.0 32 ............................ TACGCGCTTTTCACCGTCCTTCACTACGGCGC 10050 28 100.0 32 ............................ ATCGACTTTACCAAGGCGGGCAATCTGGCAGA 10110 28 100.0 32 ............................ TGAACGGGGCGGTAATACATAGCGTGCGGGAA 10170 28 100.0 32 ............................ AGCTCCGGCATGATGTCTGCCAGCTGCCGGGT 10230 28 100.0 32 ............................ AGGCATTCCGGCATGCGACGGCGACGCTATTC 10290 28 100.0 32 ............................ AACCGGGGGCGCTGCCAAATGATTGACGCCAT 10350 28 100.0 32 ............................ ATTCGCGGGCCGTGGCTGGCATGAACTGGAAC 10410 28 100.0 32 ............................ ACGCACCCCTGAAATCAACCCAAGAGACCGGC 10470 28 100.0 33 ............................ TGTCGGGAGGCCGGGACAACATGCCCCGCACCA 10531 28 100.0 32 ............................ TTGCAGGCGGCGCAGGCTCGGACAACGCTTCC 10591 28 100.0 32 ............................ TTCGGGGCCGTTTTTATTTGGAGATACCGAAA 10651 28 100.0 32 ............................ TTGACGGGTAGTCAAGGGATGGAGGTATCCGG 10711 28 100.0 32 ............................ TGCATCGAGATAGCCCAAAATGGCTACTTCGA 10771 28 100.0 33 ............................ ATGTAGCGCTGTGCCGCGTCGCGGGCCTGAAAC 10832 28 100.0 32 ............................ TAGCCGGAAAACGCTGATAGTCGGCGGGCTGG 10892 28 100.0 32 ............................ GGCAGCGGAGCAGGCGGCGGGGCAGGTGGGAT 10952 28 100.0 32 ............................ GCCCCAATACTGCCAAGGTTGCCGCCAATCCG 11012 28 100.0 32 ............................ TCTGCCTTGCAGCTGCAGTAGGCGCTGATGCC 11072 28 100.0 32 ............................ TGACTGTGCATTGCATGCAGATAATCGCCTGA 11132 28 100.0 32 ............................ AACAACTGGCTGACAGCCTACGCGGTGGAAAT 11192 28 100.0 32 ............................ TTTAAGCTCTTTGAGGATGTCCTTTTGTACGT 11252 28 100.0 32 ............................ AACACGATGAGGCCGTTAGTGGTCTCGTCTGG 11312 28 100.0 32 ............................ GGGTCGCGCATGTCCGGGTGAATAATGCCGTT 11372 28 100.0 32 ............................ GATAGGGCCTATATCCCTTTCAGTTCCTCCCC 11432 28 100.0 32 ............................ ACGCTTACGATTGCGCGTGTCACACTGGAAAG 11492 28 100.0 32 ............................ CTACGGAGCTGCCCCGGAAGTAGTCGGAGCAA 11552 28 100.0 32 ............................ AACATCTACGCGGGCCTGGACGCCCTCGGCGT 11612 28 100.0 32 ............................ TATTTCCATGACTCACGCGTCGTTAACGGCCA 11672 28 100.0 32 ............................ ACCACGACATCAGGATATTCGCTTTCGTACCA 11732 28 100.0 32 ............................ AGAAGCTGATCGACTGGGCGCTACACTCACGC 11792 28 96.4 32 ....G....................... GAGCGCAAAGCAGACTGCGATGCCGACGTAAT 11852 28 96.4 32 ....G....................... TATGGGCAAACGCAAATCCTGAGCGGGAACAT 11912 28 100.0 32 ............................ TTGAGGAGCTGACAGGTTTTCCCCGGCGCCGG 11972 28 100.0 32 ............................ TTTAGGACGGCATCAGAGGCTTTGGCGTTGTC 12032 28 100.0 32 ............................ TGCACGGTGTAAACCTGTTTGATCGGCTGCAT 12092 28 100.0 33 ............................ TCAGCGGGCCGAATTCTTTTTACTGTTGCTGCG 12153 28 100.0 32 ............................ GTTCCACACGTTCAAACAACAACAGGGGCGGT 12213 28 100.0 32 ............................ TTACTGACCGGTCACGATTTTGCGCAACGCGG 12273 28 100.0 32 ............................ TTGGTCTGCTCATGCACGACAAGGCCGTTCAG 12333 28 96.4 32 ...............A............ CGACGCCGGACCCGGCAGCGGGGCAGGGGGCC 12393 28 100.0 32 ............................ CGGAAGGGTCTGCCAACCCGGCAGCGCAGACA 12453 28 100.0 32 ............................ AGTGGGAACGTTCGCTCAACTGCAACAGATAC 12513 28 100.0 32 ............................ TTATCCGCCTCTGGATTTCCCGCGAGCTGGCG 12573 28 100.0 32 ............................ AGCAGCAAACCGTGGCGAGCACTGCCGAGCGC 12633 28 100.0 32 ............................ GTAAAACCCTTATCCGCTTGCCGGATCATCCC 12693 28 100.0 32 ............................ AAGCCAGCTCACTCTCGGCAAAAACACGCTAC 12753 28 100.0 32 ............................ TGACATGAAGGCCACGTTAAAAAGCCAGCAAA 12813 28 100.0 32 ............................ AAAGCCAACGCCGCAACCGATGCGGCCATTGC 12873 28 96.4 32 ..................T......... TGCAAGACATCCCGCTGAACCTCGGCCCGCTC 12933 28 100.0 32 ............................ GACTGACGGCTGGGACTACCGCTGGAGTGTGT 12993 28 100.0 32 ............................ TCGCGTACCCATTGCATGAGCTTTCGTTGAAT 13053 28 100.0 32 ............................ CTGGCAAGGGGGGGCTGATCGCGTCATGGTCG 13113 28 100.0 32 ............................ ACGTAGGGCTCACCATTTTTGACAAGCGCATC 13173 28 100.0 32 ............................ TGTTATTGGTGGGCGTGGCGGGATTTGAACCC 13233 28 100.0 32 ............................ GTTCTGCGGTGGACATGCTGAGCCCAACCTTT 13293 28 100.0 32 ............................ AAATACCGCACATCCTTGCCGCGCAATCTGGT 13353 28 100.0 32 ............................ TTCCCTGAGTAAGTGCGGGCCTGCGCTATCGG 13413 28 100.0 33 ............................ TCCCCGGCAGAGCAGCAGGCCGCGCTTGAGGCC 13474 28 100.0 32 ............................ ATCAGGAAATAGATGCCGTCCAGCCCCAGTGG 13534 28 100.0 32 ............................ TGCTGGCGTGCCTGGCGCAGCCCTACTGCGTA 13594 28 100.0 32 ............................ CGGAGGGGCGGCCGGTACTCAGCGACTGCCCA 13654 28 92.9 0 .......................T...C | ========== ====== ====== ====== ============================ ================================= ================== 76 28 99.7 32 GTTCACTGCCGGACAGGCAGCTCAGAAA # Left flank : AACTGGCTGCACGGCATGCGGGATCACCTAGCGCTTGGCACCATACAGCCCGTACCACCTGGTGCCAGCTACCTGCGCGTGCAACGCAAGCAGGCCAGAAGCAGCCCAACCCGCGAGCGAGATCGCCTGATGCGGCGCAAAGGCATCAGTGAGGCGGAAGCCCGGCAGCGCATACCGGACCACCGTGCACAAAGGCTGGATTTACCCTACCTGACCCTGAACAGCCAAAGCACCGGCCAGCGCTTTTGCCTGTTCATCACGCAGCACGCAGCCCCCCAGGCAGCCAGTGGCATATTCAATAGCTACGGCCTGAGCCCCACCGCCACCCTGCCCGCGTTCTGACCATCCCCGCGGCCCGCAACGGGCCGTACCCTTTTTAAAGGCTGGTCGCCTGCTCCTTAAAAATCAGATACTTACGCAACCCGCTCAAAGAAGGGGCAAACGCAGCCCAAGCCAGGCAAACCCTCTCCCCACAAGGGCTACAGCCTGGTAGACTTCTA # Right flank : CGCTCGGTTTCTCAGTACAGGATCAATGTGTTGCGCAGAAAGGGAAATCACCAAGAGGACACCATTGGATGCGAATTGCTACGCATGCCTGAGGTTCAGCATGCCATATTGGAGCATGGTTCATGATCTGAGCCATCTATTCGAGCTCAATGAGACGCATCAGCATGATGCTCGAATGCAGTCGACGGTCTCATCAAGCATGCAAGATGCCATGGCCGTATTCACGTATCAGCCGATCAAGCACTGCGCGCTCATGGGGTGTCAGGGTGGCTTCGTCAACGAAGCGCCAGTTCCGTTCGTAGAGGTCGAACACCTCCTCACCGGTGATCACATCATGGGGGTTGCGGTTCCATGCGATCAGGCGGAGCTGGGGGAGGTCACCAATGACAAAAGTGTTGGCTGCGATGTTCATAGCGTAATGATGACCCAGACTGGGGGGTATGATCAAACGAGAAGCTCGGGAATACCCACACTTGCCAACCACAGGGGTGATGGCTTGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //