Array 1 56-1469 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOF01000120.1 Mycobacterium heckeshornense strain RLE Mheck_contig000120, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 56 36 100.0 38 .................................... TATAGGGGCGGGCACGACCCATCCCCAGACGCCCGCAC 130 36 100.0 39 .................................... TCCGGGGCATGCTGATCGAAGTCGCCAACCGATACGCAC 205 36 100.0 37 .................................... GTTGCCAACGAGAGCGAGCTGGCGTGCGGACTTATTG 278 36 100.0 38 .................................... TCGACTGCGCTCCCACATGCGATCAGACCCCACCGCCC 352 36 100.0 36 .................................... GGGACCGGCGCGCCAGGTTCACGCCGTCACTGAAAC 424 36 100.0 37 .................................... CTGTTAAACCCATTCCACCAGGGTGTAGCCGTCGCCG 497 36 100.0 36 .................................... TTGTTACGCCGCGGCAAAGCCCGCGCTGCCGCGAAC 569 36 100.0 35 .................................... CCGCACAGCGGCCAAACAGTCCGAGGACATCAAAC 640 36 100.0 35 .................................... GGCGTTGGCTCTGAGTTGTTCGGTAAGGATGGCGG 711 35 97.2 36 ...............-.................... CTGTTGTGTTTCACCGGCCCACGCCACCTAACTGGT 782 36 100.0 39 .................................... TCGATGAAGGCGGGATCACCGGCTGGCCCACCGATCCCG 857 36 100.0 36 .................................... GAGATCCGGCAGGTGGACGAAATGTATGAACCCAAG 929 36 100.0 37 .................................... GGCTCGATGCCGTGCGACTTGGCGATTCGCGACGCGC 1002 36 100.0 36 .................................... GGCGTTGATCACGCTGACCCGGTGATGCCAGCGCGC 1074 36 100.0 36 .................................... GGCGTTGATCACGCTGACCCGGTGATGCCAGCGCGC 1146 36 100.0 36 .................................... GGCGTTGATCACGCTGACCCGGTGATGCCAGCGCGC 1218 36 100.0 37 .................................... GCGCCTGAGGCGCGCGTTCATCCGCTTCGGACGCTGA 1291 36 100.0 35 .................................... GTCGATGGTGTAGATGCGTGCGGTTGCGGCGTTGG 1362 36 100.0 36 .................................... CGCAGCAGCCGTTGAACCTGTCGCCTTGTCTATCGC 1434 36 97.2 0 .......................A............ | ========== ====== ====== ====== ==================================== ======================================= ================== 20 36 99.7 37 ATCTCCCAGGTGATTTCGCCTGGGCTCCATTGCGGC # Left flank : AGAACAACAAAACCCGACTCTAGAACCGGGTGGACTCAGTATCGGGGACTCGCCAA # Right flank : CACGCGGGAGAGTGAGCGTCTGTGCTTAACGGATTCGCCGTTCGCTGCGGCTAGGGGGAGGACTCTTACCCAAGAGTGGTGACTTACAAGCTTCGGCGGGTTCCGTGCTCCCTCAACATGCTCCCGCCATGTTCGGCATCACTGTTACTCTCCCGGTGTGCCAGCCGAATTCCCTGGTTTCGGCACGCGGTTGCGGCTGCTCGCCTCTGGCCCCAGCAGCTCGCCGTCGGCTGCGACAAGACGGGCCCGGAGCTGGCCGTTGAGGTCGCGTCGCCGCTTCCCGCAAGACCTTCGGGTGGGCATCGACGCTGTCGACCCTGGCAACCGCGGTCGGATCCGGGCAAGGACACGGGCTCCGCGGGCAAGCGTGTCGCGGCGCGGGGCGCCGCATATAGCCGGGTCACCGCGATGTTTACCGATAATGACAAGGGCAACGCCGAGCGGTTTCCGGCACCTGGAGCGCTGATGGATGCCGCGCCATTCGGGCTGGAGGGCTGTTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCCCAGGTGATTTCGCCTGGGCTCCATTGCGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.00,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 98-2759 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOF01000096.1 Mycobacterium heckeshornense strain RLE Mheck_contig000096, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 98 36 100.0 35 .................................... ATCGCGTTGCCGAAACTTTCGGCACCGCCGCTGCT 169 36 100.0 36 .................................... GGGCTCTGGACTCGGTGACCTCAACGGCGATATTGA 241 36 100.0 38 .................................... CGGTCGAAGAAGTCGACACCGCCGGCGATGTGGTGACG 315 36 100.0 36 .................................... ATCTTGGTCGCTGGGGATGAAGAATCATGTGGATGG 387 36 100.0 36 .................................... CCTCACGGGATTTTGACTCTTAACTGTAGGAGCAAT 459 36 100.0 37 .................................... GGCCATCAGCCGGAATCGAACTGTACAGCGTACCGCT 532 36 100.0 36 .................................... TCGATTGTGGTGCCGGAAATCTGTGTGACGGAACCG 604 36 100.0 37 .................................... GAGGTACGCCAGACACGGACCCGCGCCATTACCTCGA 677 36 100.0 37 .................................... AGGAGCCTAGAATGCCCGCGTACAAGCTGGTGGTGGT 750 36 100.0 36 .................................... CTGATCCTGACAGTGCCCGCATCGGAGATTACTCGG 822 36 100.0 40 .................................... TCGGCCCCTCAGTGTGGTGTGTCAGCGCACTCATCTGGCT 898 36 100.0 36 .................................... GGCCGGATCCCGCTCCGGCCCGGGGATGGTGTTGAG 970 36 100.0 36 .................................... CCGCGTCAACGAGCAATGGCGCATCTGTTTCGTGTG 1042 36 100.0 36 .................................... CGGCACAGAAAAAAGCCTCGGCGGTGTACCAGTCGT 1114 36 100.0 38 .................................... GGCGACACCATCAGTATGGCATGCCGTGCACTATCACA 1188 36 100.0 39 .................................... CTGGTTGATGGCGGTATCGAGAGCTTCCAGGCCACGTTC 1263 36 100.0 37 .................................... GCGCGCTGCGCATCCAGTCGGGGCTGTGGGAGTTCGT 1336 36 100.0 38 .................................... CGGCACCGGTGTCGGTTGCCGACCCGGCCGGCGGCGGG 1410 36 100.0 35 .................................... TTGAGAGGCTTGCCAGGGCCGGCGTCGACGGTCTC 1481 36 100.0 37 .................................... GTTCTGCGCTGGGCGATCACTCAGTTGCAACGGACGT 1554 36 100.0 38 .................................... CTGCTGCGCCGTCACGTCTATGAGTTCGGCTTTGAGAC 1628 36 100.0 38 .................................... GCCCACGACCCGAGGTTGACAGCGGGAGTCTCATCTAT 1702 36 100.0 37 .................................... GCTCGTGCATTCGGGGCTGTACTCGGTGCAGTTGCAG 1775 36 100.0 35 .................................... CCCGCCAAGAAGTCGCGGACGCACGCGCCGACCTC 1846 36 100.0 36 .................................... CTGATCGTCGGCCCAGCGCACAGCCCGCTCAAAATT 1918 36 100.0 38 .................................... CCGGTTGGTGACCCGAAGTCGCGGGAGGTCCTAGACCG 1992 36 100.0 37 .................................... ACCGAAAATTGGTGCGGCGCCGTTTGTTTTGCGTGGC 2065 36 100.0 39 .................................... CGCGTCGGTCAGCGTGCCGTCCGTGGGGATCCGGAGCGT 2140 36 100.0 37 .................................... CTGCGTCTGGATCGCGGCCTGCACTTGCTCCAAGGTG 2213 36 100.0 37 .................................... ATCAACAAATCGGCTTCTGACTGTACCCGAGGTAGCT 2286 36 100.0 36 .................................... GAATTCGTGTGCGTGGTAGAGCACGTCGGTGTAGCA 2358 36 100.0 37 .................................... ACGCGTCATCGTTCAAGCGGGCCGCCGACCAGATCGA 2431 36 100.0 36 .................................... GAAAACGCCGACGACCGCCTGCACCACCCTGGCTAG 2503 36 100.0 38 .................................... CCAGTTGCTCCGGCACGCTGACCAAATTCGCGGGATTG 2577 36 100.0 37 .................................... GCACGGCATCAACGAAGATGTTTTGCTCAGGAAAATC 2650 36 100.0 38 .................................... CGGTACCGAAAGAGCAGACGCAGCGGCAGAGCATCGCT 2724 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 37 36 100.0 37 GCCGCAATGGAGCCCAGGCGAAATCACCTGGGAGAT # Left flank : ATCCACGGGGCCACAGGACTCTAAAACAAGGCGGACTCATTCACCGGGAACACCCTAAGATGATCAACGCAAAATCGAGGAACTTGAGAGCCAGATCG # Right flank : TAGCAGGAGAGATTTATGGCCTTTGACCTGCAGCGCTCCGAAAGTTTGCGAGCGCTGCCATAGCTGCGCGCAGAGGTTTCAGATATTGAGTTATCAAACAGCCACAATACCATATCTGACCTCGGCGCGAGTCCTGATAGGGCAGTACCTAGCTATTTCAGCGCTCGCAGGATTCCTATATGATTGTCGGGCCTCGCGTCGGCAGCTCGGCCCGTCCGCTAGCTCCTATAAACTCGAAGCATTCAGTTCCCCGAGAACTCGGATCACCGAGGTTTACAAAGACCAAGGAGTCCACAGCGTGGTTCACTGCCTTCCCCAGTTCAAGGCACATAGAATATTTCTCGCCTTCATCAAGATCACAAATAAATACAGAGTATTGGAGCGCGTATCCGTATTTCTTGGCAATCGAATGGACTTCACGCAGGCGGCGGTCGTCGCGGATGTCATAAGCTACGAGGTAGCGGATTCGCTTCATCGGTTACCTGGTGATGATAGGCGTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCAATGGAGCCCAGGCGAAATCACCTGGGAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.10,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //