Array 1 1489314-1490732 **** Predicted by CRISPRDetect 2.4 *** >NC_022592.1 Clostridium autoethanogenum DSM 10061, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1489314 30 100.0 36 .............................. AGGAACAACTGGGTGGAGTGCTGATGCTGTAGATAA 1489380 30 100.0 36 .............................. GCTATCAAGAATTTGTTCTTCAAGCTTTTTAATTTC 1489446 30 100.0 37 .............................. TTTCTTCTGCTGCTTGTACATCCCTGCGCATTGAATT 1489513 30 100.0 37 .............................. TAATGGAAGATGTAAATGAAGAATTAAGTATTCAAAC 1489580 30 100.0 36 .............................. CTAACAGAAAATAAAGCCGGATTTTAAAGGAGGGAC 1489646 30 100.0 35 .............................. AATTAAATCTTCTATTTCTTTATCTGTATTGTTTA 1489711 30 100.0 36 .............................. TTAACATAGTACCTGATGCGTATTATTTTGCAAACT 1489777 30 100.0 36 .............................. CACAATGTGCAAACGGAGGAATTGTTTCTTCTGATA 1489843 30 100.0 37 .............................. TTAAAACCCTCGGTATATTGTGCATCGCCTAAAGCTA 1489910 30 100.0 36 .............................. ACCCAATAAAATATACGTTGGTATACCTGTAGACAT 1489976 30 100.0 36 .............................. AGAAAAAGCCTGAACATATACGTATTATATTTAAAG 1490042 30 100.0 36 .............................. GGAATTAAAAAGTTATAAGATAGACGACATATCATA 1490108 30 100.0 36 .............................. TTAGTTATTCCAGTTCCGAGATTGGTATCTGTATTC 1490174 30 100.0 36 .............................. GTAATTCTCTACATATTCAAGCCCGGCGTTTATATC 1490240 30 100.0 36 .............................. TTATATGGCAAGTCTTTTGGTGTACTTGGATCTGCA 1490306 30 100.0 36 .............................. GCATCAACTTCAGGTATAATTTGAAGCTTTTGAAAT 1490372 30 100.0 36 .............................. CCAAATGCCTTTCAGGAACAGGCATAACCTTAATTT 1490438 30 100.0 35 .............................. ACAACCACTACAAAGAATACTCCTACAAAAGAAAC 1490503 30 100.0 36 .............................. GGCCATTAGTGCATTAGGCGTTGACGAGTTTTGGCA 1490569 30 100.0 36 .............................. AAGTATATTTAAACAAATTATAGAAGGATGGAGCAA 1490635 30 100.0 38 .............................. GGGAAGCTTTATATTTAAATTTAAGTCTTTAGCAGGAA 1490703 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 22 30 100.0 36 ATTTAAATACATCTCATGTTGAGGTTCAAC # Left flank : CTTATAAGCAAACTCCATCTGAACCTAAGAATCACTTGATAGTCCAATTCCGTGCTCCTCCTAATATATATTTTTAGGATTGTGCAGAGGCTATTTGTATTTGTGCAATAGCCCCTGCTATGCACACACAATCAATGTTAACACAAAAATGCTCCTTTCTTTAAGCTCTTATATATAGTATATGTATCCATTTTTACTCACTTATTATTCTTTTTTGTTCTTTTTGCAATACCAATTAGATAGCATTATATAAAAATCCTGTTCTTCTTTTATTTTTGCATTTTTAAATAATTCTTTTAAGTCCCAATACGAATATTTTAAGAATTGTTCATATAAATTATTTTGTTTATTTGTTTTCTCTATACTAATTCCTCTAACAAATAATGCTTTTATTATATTATATCCTAATACACCTCTTATATAAATAATTCTCTGGAAGTGTACATCTTATGTTAAGGTTCAATTAAAGAGACTGTTAAAAAATGCATACAGAGAAATTT # Right flank : CCACAGTAAAATAGCCATTCCTTATTTTCATTATAACCCTAAAACCCTTAATAATAAAGGCATCAACTGAAAATTTTCCAACCGTTTTTCAATTTTCATAAACTCAGCCAAAAAAGTGCCTCAATTCATTACATATCAATGCATTGAAGCACCTTCTATCTTCAAAGAGGTTGGAAAAATCAAAGTATTAAATCTTCAGTATTATTTTCATTTATCCCTAAAGTATCCTCCTCAAAACAGCTGTCATTCATAAGCTTTATTATTGTGACAAAATCCTTATCCTTTATAATCTTATTTAATTCACTCTTCAACTTTATCATTTTAGAAGTCGTTATAGCCCCTCTAAAAACAGAATTCTGATGGTGGTGGAAATATTTTTTGCATACCTTAAATACCTTATTTACCCTTTTCTCATTTACATCATAAAATACAAAAGCATAGTTGAAATTAAAATTTTTTCCCATAAAGCTCCTCCAATTATTACATCATATTTTTCAGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTGAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 1502712-1499908 **** Predicted by CRISPRDetect 2.4 *** >NC_022592.1 Clostridium autoethanogenum DSM 10061, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1502711 30 100.0 36 .............................. GCGAATAGTACCTTTGGTTTTTGCTCCTGGAGCTGC 1502645 30 100.0 36 .............................. TATTCTACAATTTGGTTTGTTTCTTTATTTATACAT 1502579 30 100.0 36 .............................. TATATGCCTGTAATTAATAAAATTACTGCTATTATT 1502513 30 100.0 36 .............................. CCAACTTGATAAGGTGTAAAACATATGTTTTCATTT 1502447 30 100.0 36 .............................. ACTTCGCTAAATTATGTTTTAACGAAGTTGTGCAAA 1502381 30 100.0 36 .............................. AAGGACAAAACGCTAGGAATTTTGAGCCTAACCAAT 1502315 30 100.0 36 .............................. AAAAAATGACTAATATAATATTATCTTATCCATTAT 1502249 30 100.0 36 .............................. CAGGTAAAATTCGATTATTCTGTAGTAGAGAATGTA 1502183 30 100.0 36 .............................. TGTTTGGAGTAATAAATTATACACAAAATAGTGGGC 1502117 30 100.0 36 .............................. TGATGTAATTATTCCTAATCCAGTATCTTTAGCACC 1502051 30 100.0 36 .............................. CCTTTTTTTAACTCTATATTTTTTATTAAGTTATCA 1501985 30 100.0 35 .............................. TTTTCTAGTAATAGAGGTTCCTTTTCTCCACCAAC 1501920 30 100.0 34 .............................. CAGTCTACTCGATACAATGGCTTAAACTGCTTAA 1501856 30 100.0 36 .............................. CAGTATAAAGCTCCAACTTTTATATGCCGAAGCTTT 1501790 30 100.0 38 .............................. GTAATAACTGTTGGAACTGCTATAAGTAGTAAGCCAAA 1501722 30 100.0 36 .............................. TAGCATCCCATACAGTTTTGAGTGTGTCTTTTATCG 1501656 30 100.0 36 .............................. TAATCATTTTGTTGCTTAGTTATACTATCTTTAAAA 1501590 30 100.0 36 .............................. CGAGCAAATTCTAACATTGCATTTAATTGTGGTCTA 1501524 30 100.0 36 .............................. GGGATTAGATCAGGATGAAATTGAACTGCTATAGAG 1501458 30 100.0 35 .............................. GACATTGCAGATGTATATTTAAAGTTTGGCCAATA 1501393 30 100.0 36 .............................. TTTATACATTCCTCCATTTTTATACTAATTATTTAA 1501327 30 100.0 36 .............................. TGGAAAGGAAGTATAATATGATAGATGAGATATTAA 1501261 30 100.0 37 .............................. CTTACTATTTTGAGTTGGGTTATCTCCTTCTTTTTCA 1501194 30 100.0 38 .............................. TTTGTAAGCAGAAAAATCCATATCTCTACCTTGTCCTA 1501126 30 100.0 36 .............................. CTTACAGGCGTATGTCCAAGATCATTTACTGCCTCC 1501060 30 100.0 36 .............................. TTTTTTTACCTTCTTAAAATTGCTGAAGCCTAGACT 1500994 30 100.0 37 .............................. CAATAATATGGAGCAAAAATAATACCAGTACCTAAAA 1500927 30 100.0 35 .............................. CTTACATAACCAGATATAGCATCTAAGAAATGTTT 1500862 30 100.0 35 .............................. TAAATAGTAGACCATCCAGTCTGATTGCACGGCAT 1500797 30 100.0 36 .............................. TAAATCGAATAAAGGATAAGAGCTTTCAATAATGAT 1500731 30 100.0 37 .............................. CTGGGAGATTATCCATTCAATAGGTTTATTTGATTTT 1500664 30 100.0 36 .............................. TTCTTGCCCAAGGGAATCCTTCTTCTTTGTATCTGC 1500598 30 100.0 37 .............................. TTCATCTACAATTTTTTCTATTTCTTCTTTTGTGACG 1500531 30 100.0 36 .............................. ATTTCATTTGCTGTTAAAAGTCTTATTTCTTCCATA 1500465 30 100.0 35 .............................. AAGTCAATGCAAATACTGATAAAGTAAACAATAAA 1500400 30 100.0 35 .............................. TGAAATATAGTAATGTAGAATTGGCGAAAATTAAA 1500335 30 100.0 37 .............................. GTGGATTTAGGATCTTTTGTGAAGTTTCTATTTATAA 1500268 30 100.0 37 .............................. AAACTTCCATCATTAGGATACATATCAAGTATTTCAA 1500201 30 100.0 34 .............................. AACTTAATTACCCTTCCAAGTGGCTCTATAGTTG 1500137 30 93.3 37 .........T......G............. TGAAAATCTTTTAAAGAAGTATATGGTCTATTTTTTA 1500070 30 90.0 37 A........T......G............. TAATAATCTCTGGCATTTTCCTCGTCTGGAGCTATAA 1500003 30 90.0 36 .......T..............GA...... AAATAATAATTGTAAATAATACATTATAAAGGAATT 1499937 30 80.0 0 A.......AT..T....A....T....... | ========== ====== ====== ====== ============================== ====================================== ================== 43 30 98.9 36 GTTGAACCTCAACATGAGATGTATTTAAAT # Left flank : TTATTTGCTTCCAAAACACCAATTATTTGTCGTCAAGTTTATTTTATACTGAATTCATAGAGCTAAGCATGTTATCTATTTTGACAGTAGTATTGATATTCTTATTTCGAAAAAATCTTTTTTATGATAAGTCTTTTTCAACCAATTTACGAAGTAAAGGTGCTTAAAGTTATTTGAATTTAATGGCTTAGGGCACTTTTTTATTGAGTTTATGAAAATGAAGTTGAATCTTAAAGGTGCTTTTTTATTTGAAATAAAAAAATGGTTAGAGAATTTTGGTAAAAACTTATTGTGTGTTTCAAACTAAATATCATGGGTAGATTTTTTCCAACCTCTTTGAAGGTAAAGTGTGCTTAAGTGCATTGATATGTAATGGATTGAGGCATTTTTTTGGCTGAGTTTATGAAAAGTGAAAAACGGTTGGAAAATTTTCAGCGAATGCCTTTATTGTTAAGGGTTTTAGGGTTATAATGAAAATAAAGAATGGCTATTTTACTGTG # Right flank : ACTTTATTGGTATAACTTTGAATTATCGTCAAAGTGATGATAGTTGAACCGTAACAAATGTTGTATGAAACAGATTTGTTTAAATTAATTCTAAATATTTCTCAATACTTCAACTTTATTGGTTTTACTATGAATATAAATTTGATTTAAGTACAATAATATAAATGTAAACAGAATTTACTCTATAGATGATATAAACATCAGAAAATATTGGATTATGGTTATCGTCTTTTTTATCATCTGCTTAGTAAAATCAACAATATGTATAGATGCAAAGCTAACCATAAAAAGATAATCCTGTTATACTAAATTTATCTAAAAAGCTCCTCATATTTGCAGGACTTTCCATAAATTAATCGAATAATAACATATATGGAAGACAAATCTTTGTAATATACAAATGAATGGAGGGTGATTATGGAAATAAATCAAATAAACATTAAAGTATACATTCTAGAGAATATTTCTATAGAACAGGCATTGGAAGATCTAAGCAAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTCAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 3 1506687-1504480 **** Predicted by CRISPRDetect 2.4 *** >NC_022592.1 Clostridium autoethanogenum DSM 10061, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1506686 30 100.0 36 .............................. TGTGTTATACTTACGTGCTCCCATCCTTTTCCGTTA 1506620 30 100.0 36 .............................. GTGTCTAATATAATAGCACCTGTCACACTATCATAC 1506554 30 100.0 36 .............................. TTGTCTTTGTTGCTACATACACTCCAATAACAAATA 1506488 30 100.0 36 .............................. TGAAAGAGGCTGATTTAATATTTGTGGATCCGCCTT 1506422 30 100.0 36 .............................. GGAGGTATAAAATTTATGAATATTTTAGGAGTTGAT 1506356 30 100.0 35 .............................. TATATATCTATACCTTTTAACAATTTAAATACCTC 1506291 30 100.0 36 .............................. TTTCTCTTATAGATCCTTTAATTCTTCTATAGCTTC 1506225 30 100.0 35 .............................. CCTCATATTCTTTTAATAATTTATAAAATGTATTT 1506160 30 100.0 36 .............................. AATATATGTGAAATTCTTTCTCTTGTTGCTGTCAAA 1506094 30 100.0 37 .............................. AATACATCTATATGCTTAATGCATGTAGTATCTATAC 1506027 30 100.0 36 .............................. TCATCTGCTTATTAGCAATTTTATACTCCTTCTCAA 1505961 30 100.0 35 .............................. GTACCTCCTGCACACATAGCAGCAACAAAAGCCAT 1505896 30 100.0 36 .............................. TAATTTCTAATTCTATTGTATTCGCTAATAAGGCAA 1505830 30 100.0 36 .............................. GTAAAAAACAATTTATTGCACTGATCTATGGTTATG 1505764 30 100.0 36 .............................. CTCTAAAGCAAAAATGTGTTACATAGTGCGTGGAAG 1505698 30 100.0 36 .............................. ATGGTTGCACTTGGAACTTTATTTTCATTTTCTTTT 1505632 30 100.0 35 .............................. TCTTTTGATATGGCCCCTGCATGAGAAAGTTGTTG 1505567 30 100.0 36 .............................. GATGTTGTTGTTCCACTTAAATTATTTACGTATATA 1505501 30 100.0 36 .............................. TTTTTTTCTTCCATCTCACTTTTTTCTTTCTGCAGC 1505435 30 100.0 36 .............................. ATTTAACTGTAAGGTATCTTTTAAACAGCCTAATAT 1505369 30 100.0 36 .............................. AAATAAGTACAGAGATCTAGGAGAAGATATATTTCC 1505303 30 100.0 35 .............................. TTTGTTAGCCGCCTTGGTGTATCCCAAGTAACCAC 1505238 30 100.0 35 .............................. TTTTTGGGAATTACTATTTAAAATGGGTGAGCAAT 1505173 30 100.0 37 .............................. TGAGAGATATTAATAGAGATATTAATTGCTGGGATAG 1505106 30 100.0 36 .............................. TAATGCTAGTGGACTTAATTTTCTTAAGGTAATAGA 1505040 30 100.0 36 .............................. ATTCATGGAATATATTTCTTTTTATATTTAATGCCC 1504974 30 100.0 36 .............................. GCACCTAAGTAATCTATAAGTAAAGTATCAACTCTT 1504908 30 100.0 36 .............................. GAATTTATATAAACCCAATCAGAATATATATAATTA 1504842 30 100.0 37 .............................. TAAATTAATATTCAAGATAGCAGAGCCAAGTACAAAT 1504775 30 100.0 37 .............................. ACGCTATAGCTGTTAGCAAACATACTTTATAATCATC 1504708 30 100.0 36 .............................. AGAGTACGTTCCCCAAAAGTGGGGAGAGTTGATATA 1504642 30 100.0 37 .............................. CGGTGTGGCTTGATAACTATTTTGAAAATAACCACCT 1504575 30 93.3 36 .........T......G............. AGTAATTGGAATGTTAATATTTGATCATTAGCTACT 1504509 30 86.7 0 .........T.....G........C...T. | ========== ====== ====== ====== ============================== ===================================== ================== 34 30 99.4 36 GTTGAACCTCAACATAAGATGTATTTAAAT # Left flank : TTTTTATTAGTCATGTCAAATTCATATCGCTCATAAGGCTTTTTTAAAGTAATGTTAAATTTAGTAGGAAAATTATTTTTTGTATATTCTGTAAAAGAGTTTCCATCTTCTGAAACATCAATTTTACTTAAATCGCTTCGCCACTCATATTTATTGTTGTTTGTAACTACGTCCCATACTTTTTTAATATCTGATTTAAATGTAGTTGTAATGGTCGATTCCTTCATAATACACATTCTCCCTCATAAATTTACTATTTATCTGTATATTGTACAAATAAATTATACTATTTTATACAATATATTACTACATTTTGTTGAGTATTTTCCAACTAATTTGGAGGATAGAGATGTCTTAAGTCATTTGAATTCAATGGATGAGGGTACTTTTTTTATTGAGTTTGTGAAAAGTGAAAAACGGTTGGAAAATTTTCTGTTGATGCCTTTATTATTAAGGGTTTTAGGACTATAATGAAAATAAGAAATGGCTATTTTACTGTG # Right flank : TGAAAAATTAGGAATATAGTAGACTCTATTATAACGTGAGATTGATGAAAGTCTATAGTCTTAAAACTATTGAAATTACTAAGGTTTTTCTCTGAATTTATATTAATATAACAGGAAGGGTGGTATTTTTGATAAAAAAATTGCATGGGTATCTAATAAATTTATCCATATTTAAGTTTATTTTAATTACATCAATAATACCGTTCTTTATATCATATATTGCTAGTTTAGTAATAAAAAATTATGTAAGGCAATTTCCTAATGACATTCTTAAGGTAAATAATTCATTAATAACAAATGTATCATTTACTATTAATGGCATTTTTATTGCACCATTAGTTGAAACATTTATATTTGTAATAATAATAAGTATATTTTTATATTATTCATATTCCCAAACCATACAAATAATTGCAGTAATTGTAGCTGCAATATGTTTTGGAATTCCTCACTTTTTTAACACCAATGATATGATATGGGGATTATATTGGGCAATACAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTCAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //