Array 1 677711-681949 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066064.1 Corynebacterium urealyticum strain FDAARGOS_994 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 677711 29 96.6 32 ............................G GCGAAGTCCTTCAAGGACTCCATCATGAAAAT 677772 29 100.0 32 ............................. ATCCCAAAATACGGAACAAAAGCGGCCAGCAA 677833 29 100.0 32 ............................. GGGTGTGTAGACCCCTCATGGTTGAACTGTTG 677894 29 96.6 32 ............................G TTGCGAAATGTAACATACGGGGCTAGGCGCCA 677955 29 96.6 32 ............................G TCGAGTGAGAAGACTAAAGCTTCTCGAACAGG 678016 29 96.6 32 ............................G GTTCTTAGCGAACTCCTTACTCATGCCCTTAA 678077 29 96.6 33 ............................G CTCCCTGAGGCGCCGAAGGGCGACTTGGGGGAA 678139 29 100.0 32 ............................. TACGGCAAGGAGCTGCTGGAGCTGATCCACAG 678200 29 96.6 32 ............................G GCCGAGGGTGTGATGAAGCAGCTGGAGGAGTC 678261 29 100.0 32 ............................. TCACGGCCGTCCCTAATGCGCTCAAACTCCTC 678322 29 96.6 32 ............................G TAGCCAGGCTCAGGCACCACCACAGACGACAC 678383 29 96.6 32 ............................G GCTCCAAAACTCGTTGAAGTCCTCGGTGTACT 678444 29 96.6 32 ............................G GCGGCGTTACCGGAAATGAAGGCGGGCCTAAT 678505 29 96.6 32 ............................T CAGAATCACGTTATCCGCCGGGGCGGGGGCGT 678566 29 96.6 32 ............................G GCAAAGAAGGGATTCGATGAAACCTCGAGTGC 678627 29 100.0 32 ............................. CCTTTACCACGCCATTCTGGGCTTGATTTGAG 678688 29 100.0 32 ............................. TGTCTGCTCCGACTGCGAGAAGAAATTCGACT 678749 29 100.0 32 ............................. ACCGCCGAGGACTCAAAAGGCGTTAACTCACG 678810 29 96.6 32 ............................G AAAACGGCGCGTGGCCTGTCGTTTGAGCTTGT 678871 29 96.6 32 ............................G AGCCTGGAGCGTCAGGTCGCCGCGTCCGAGCA 678932 29 96.6 32 ............................G GAGCCCCCACTGAATGGTGGAGAAAAGGTAGG 678993 29 100.0 32 ............................. CCGGGCGCGACGCGCCAAGTGCCAGCCCTGCC 679054 29 96.6 32 ............................G GCCGCGTGGGAGATTCTGTCGCAGGCGATCAT 679115 29 96.6 32 ............................G TGCGCGGAATGGAGAATATCCATTTCCCCTAG 679176 29 100.0 32 ............................. CGCCACCTACCGGGGGCGGGCTACCGCCACCA 679237 29 100.0 32 ............................. ACCACCAAGCCCAGGCGGGCGATCGACAGCCC 679298 29 96.6 32 ............................T CATGACATCGGTCATTCGGCACCCTCCTTCAC 679359 29 100.0 32 ............................. TGCGCTACGCGAACAACGGAAACTCCGTCACA 679420 29 100.0 32 ............................. ACAGTCCCAGCCACAAACGCCAGAAAGGGCAC 679481 29 100.0 32 ............................. CCCGCCCACGCGGCGACCGCGGCAGCCACCAG 679542 29 96.6 32 ............................G GAAACCCACCCCCGTGACCAAGGAGTCCAGAA 679603 29 96.6 32 ............................G TCTCATGGACGGAGCCGTCCGATAACTAGGCA 679664 29 96.6 32 ....................A........ CACTTCAGCAGCCCACCGCCAGCCATAACCGC 679725 29 96.6 32 ............................G GCGTGGAGCATGGTCGCCGGTAACGCTGATGA 679786 29 96.6 32 ............................G GCCACTATTGGTGTGATCGCTACGGCGATTCT 679847 29 96.6 32 ............................G GGGGCCCCGGTGATCGTCGCGGGCACGATCAA 679908 29 100.0 32 ............................. AGCACAGGGGCAGAGGTTACGAAGCCGGTGGA 679969 29 100.0 32 ............................. ACGTTGTGTGGGTGGTCTGATGATCCGCATAT 680030 29 96.6 32 ............................T CTGAGCGTCTGGAAGAACTGGCGGGCGTTGAT 680091 29 100.0 32 ............................. ACAGACGACTGGCGCACCTGGTCCACCGGGAA 680152 29 96.6 32 ............................G CCGTGATCCACGGCGACTGCACCTACAACGAC 680213 29 96.6 32 ............................G CTGTACATCGGCAACATGGCCGCCGAGAACCC 680274 29 96.6 32 ............................G GGGGCTGCGAGTTGCTGTTTTCCGTTGCGGTT 680335 29 100.0 32 ............................. ACCATGCGGTGGAGGCTGCAGGATTACACGAA 680396 29 100.0 32 ............................. GCCAGACGCGAACTCCATAGCAGGAACCAGCA 680457 29 100.0 32 ............................. CCGGACTGGACACCCGAACAGGTCGAGGAAGA 680518 29 100.0 32 ............................. ACCGCGACGACGATCTACGTGGTGCTGAAGAA 680579 29 96.6 32 ............................T GCCGGCAACGCCCTGGCAATCCTCACCCGTGA 680640 29 96.6 32 ............................G GAGGGGCGCACCGGGCGCGTTTACTACCCCGC 680701 29 100.0 32 ............................. AGGGGCAACGTCGATAGATTCTCTAAGGGTTG 680762 29 96.6 32 ............................G CACGGTAAAGCCGGTTTCGTGATCCGTCGCCT 680823 29 100.0 32 ............................. ACTCACAAGCACGGCACCGCGATTGTGGTGTC 680884 29 96.6 32 ............................T GAGGCGCGGCTTGTGAACACATCGAGGGATGT 680945 29 100.0 32 ............................. GACACGTCGGATAAAGCCACTGCTAAGGCTAT 681006 29 100.0 32 ............................. ACGTTCTCCCACGCCCACTGAATCGCAGTAGA 681067 29 100.0 32 ............................. AGGTCGGGGGTGAGGTCGGGACGGCCCATGTG 681128 29 100.0 32 ............................. ATCACGTTCACCCCGATGCTGCGCCCGGGTGA 681189 29 96.6 32 ............................G CCGAGGGTTGTTTCCTCGTGGTAGGTGATTCC 681250 29 100.0 32 ............................. CTCCGAAGTCGGCGGGAAAGCGGTGATGGTCT 681311 29 100.0 32 ............................. AACGCGCTACGCGCCGGGCACAGTAGTCGACT 681372 29 100.0 32 ............................. CTACAGTGGGCCCCGGTGAGACGCATGGGCTT 681433 29 100.0 32 ............................. CGACCACACAGACCCCGGCGCAGGCTTCCCAA 681494 29 100.0 32 ............................. AGATCAATCACCTGCCCGATCGGCTCAAACGA 681555 29 100.0 32 ............................. ACACTCCGGCAAAACACCCTCGGTGCGCAGCA 681616 29 96.6 32 ............................T TCTGGACTGGTCCGCCCGGTTCGGGTTCGGCT 681677 29 96.6 32 ............T................ AACCCCACCAACGGGGGTAGCAACGGGGGTAG 681738 29 93.1 32 ............T...............G CCACCTACCAGAGCACCGAGACCACGTGGGCC 681799 29 93.1 32 ............T...............G AGGGGTACGCCGAGGAACTGACTAAGCACCTC 681860 29 96.6 32 ............T................ GCCTGCGTTACCGACAGCAGCCACAGCCCCGA 681921 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 70 29 98.1 32 GTGCTCCCCGCGCCAGCGGGGATGAGCCC # Left flank : AGCGACATCGAGCTCATGTTGTGGAGTGAGCTTGAATTGACCTCTGCGGGCATTAATTGGGCGGGGGAGGGTGTGGACCAGTGATGGTGCTGATCGTCACCGCTTGCCCAGCCGGGCTGCGAGGGGATCTCACGAAGTGGTTGATGGAGCTCGCGCCGGGGACGTTTGTTGGTAGGCCTTCGGCGCGGATTCGTGAGCTTCTATGGGATCGAACGGTGGAGTTGTGCAAGGACGGCCGTGCACTGCTGGTCTACAGCAGCAATAACGAGCAAGGTATGGAGTTCCGCACGCATCGGCATGACTGGGAACCCACCGATTTTGACGGTCTTAAGCTCATGATGCGCAAAAGCGATAGTGAGAAAACACGACGCAGAACGGGCTGGAGTAGAGCCCGCCAATTGAGACGAAAGTACGAGGGCCGGTAATTCGGGACTGGGGATGGCTTCGTACAGTTGAAGCTAGAATGAGGCTTAGGCTCGAATATTCGCTGGTCGTCCAGT # Right flank : CTCGTCCGTGCGCCTGTTCAGTGCCTCCTGGGCCTTCTGCAGTTCAGACTTCTCTGCCTCCTGCTGGGTACGCCACGCTTCCGTGTCCTGGCGCAGTTCGTTGCGTTCGGTTCGGTAACGGGCTGCTTCCCGGCGGGCGTCCTCGAGCTCCTTGCGGAACGATTCGGGGATATCCGGGGTTTCCTTAGCCTGCGTTTCTGGCGTGGTTGGCGTCGCCTCCTGGGCGTTAGCCTGTGCCGCCTGGTTGTCCTCGGCGGCGGGAGTGTTCTCTGCCATTGGGTTAAACCTCCTGGGCCTTAAGTTCTAGTGGTCGTTGCAACACTGATCTGAAGGGTTGGTGTTGGTGATGACGGTGTCACGGTGGGATCCACCGGTTGAGGAGATCACTCGGTTCCACCAGTTGGTGGTGGGTGATGGTTTGTCGGTGCGTGCGGCTGGGCTGGATCTGGGATGGTCGTTAGCTACGGCGTATCGGATTGCGCATCGTGATGGGTTACCAC # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.66, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //