Array 1 12524-10777 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCFP01000024.1 Lactobacillus helveticus strain IMAU60206 Scaffold24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 12523 30 100.0 36 .............................. AACAATTGAGCAGATGAGAACTTGCCCTCTCCCACA 12457 30 100.0 36 .............................. AAATTTGCGCTCAAATCATCGGTAAGCTCAACGATA 12391 30 100.0 36 .............................. GTAGTATTCATCATTGCTGGTCTTGCTTTTTGCTAT 12325 30 100.0 37 .............................. TTCAAACAGTGTTTAAGCGAGCTGGGCTGTTTAGTGA 12258 30 100.0 36 .............................. AAGTCAAGTACACTAAGGCTCAAATTAAGCAAGCTA 12192 30 100.0 35 .............................. CTTTAGAACTGCCGTTTTTGATGAAATTGGTGAAG 12127 30 100.0 36 .............................. CGATCAAGAAATGATCCATTTCATACAAAAAGCAAT 12061 30 100.0 38 .............................. TTGGAAATTAAAAGTGATGTTGCTAAAATACTAGCTCA 11993 30 100.0 35 .............................. CTTTCATCTAACTGGCTTTCATCTAATTGAACACC 11928 30 100.0 37 .............................. TAGCTAAATCTTTGTCTACCACTAAAGGATTTTTGGA 11861 30 100.0 36 .............................. ATGCCATCAAATACTTGATCAATATTAATTTTGCCT 11795 30 100.0 36 .............................. AAGAGTAGACGGCTTAACGTCTTTACGATAAAAAGA 11729 30 100.0 36 .............................. TACAAAGTTGTCTTGCTTTTTCATCGTCAAACATAC 11663 30 100.0 37 .............................. AAAATTATTACGCCGTTGATGGATCAAAAACAGAAGC 11596 30 100.0 35 .............................. CCTCACCAATTTCATCAAAAACGGCAGTTCGAAAG 11531 30 100.0 35 .............................. TTAGCACCGATCTTACAAATTGTAGGACATGCACT 11466 30 100.0 35 .............................. TAGCAGATGGTTCACTGTCTACAGATGGTCAGCAA 11401 30 100.0 36 .............................. TTTTTTCTACTGGATATTTGCTTTTTAAGGGCAATT 11335 30 100.0 37 .............................. ACCCACGAATGAGAATCAGCAAACAAGAAATTTTTAC 11268 30 100.0 35 .............................. CTATTTCTAGCCTATGGACTGGCAGATCGTGGCAA 11203 30 100.0 36 .............................. TTTTTCTATAGCTATAGTTCCATTTCCTAGAATGCT 11137 30 100.0 35 .............................. ATTATAATCATGTCTATATCGTTCTACACCATATT 11072 30 100.0 36 .............................. CTGCAAGTCTTTTAATTCTTTAGAATCATCATCTGA 11006 30 100.0 36 .............................. AAACTTGAATGATCTATAGTACCTCTTTTTGAGTGA 10940 30 90.0 38 ............T.............G..T TTTTGAAAGTTTAATCTAAAAGTTTTAGTAGTTGGTAG 10872 30 83.3 36 ..C.........TC....G..........T AAAGCCGAATTTTACACCAACTTTACTAAATATGCT 10806 30 73.3 0 .A......C.......G...G..AA...TT | ========== ====== ====== ====== ============================== ====================================== ================== 27 30 98.0 36 GTTTTTATTTAACTTAAGAGAAATGTAAAG # Left flank : CCTATGAGCCTTATGTTATGGGATGGTAATAGATATGTATGTGATTCTGGTTTACGATATCGTAATGGATAAACAAGGTGCTAAAGTAAGTAGACATGTTTTCAAAATATGTAAAAAGTATTTAACTCATGTTCAAAATTCAGTATTCGAAGGTGAACTAACCAAGTCCCAGCTTGAAAGCTTGAAGAATGAGTTGGATAGATGGATTCGACAGAACGTTGATTCAGTGATTATATTCAAAAATAGAAATAAAGATTGGCTTGATAAAGAATTTATGGGTCAGGATTTAACTGATTTAACGTCGGATATATTCTAAAGAAGAATCTGTCGATGTAAGATACGAAGAAAATCCTGGGAGATCGACAGATTTGCAAAATGCCGGTACAATGATATTTGTGCGATTTGTCTAATGATTTTAGTGATTTTTGGATGCGTTTTTGGTTAGGTCGACAGATAGGGCCGTTGAATCTATTGATACAGTAGGACTGGTAGTTGCAACT # Right flank : GTGTGATTAAAGTCAATTAAATATAAAACATAAAGATTTATATTTAATTTACGGGAAGGAAACTACGATCAAACATCCTACTAAAATCCTACCAATTAAACTGGTAAAATAGATAAGTAAGTATAGAGAACAATTTTTATAAAAGGGGAATAAAATGGCAGATGAAAAATTACTTCTAATCGATGGTAACTCTGTAGCTTTCAGAGCCTTTTACGCTCTTTATCGTCAACTAGAATCTTTCAAGAGTCCGGATGGCCTGCACACTAATGCCATTTACGCTTTTAAGAACATGCTCGATGTCCTTTTAAAAGACGTTGATCCAACCCACGTATTGGTAGCTTTTGATGCAGGAAAAGTCACTTTTAGAACAAAAATGTATGGTGAATACAAAGGTGGACGTGCGAAAACTCCAGAAGAGTTGCTCGAACAAATGCCTTACATTCAAGAAATGCTGCATGACTTGGGTATTAAAACTTATGAATTGAAGAATTATGAAGCAG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATTTAACTTAAGAGAAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 17179-17016 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCFP01000024.1 Lactobacillus helveticus strain IMAU60206 Scaffold24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 17178 30 100.0 36 .............................. ATATATAAAAAAGATCAGCAATTAGCTTACAAACTA 17112 30 100.0 37 .............................. TATAAGAAGTACTCACCAGTACGTTTCTTATAAAGCG 17045 30 96.7 0 ....................G......... | ========== ====== ====== ====== ============================== ===================================== ================== 3 30 98.9 37 GTTTTTATCTAACTTAAGAGAAATGTAAAT # Left flank : GTTTCCAAATCTAGGTCGACGAGAAGATTTGGTAAATTTTGAAGAAGTAAAAATCGTTGATGTAGAAAAAAAGGATAAAGACTTAACTGTAAATCATGGTGCGTATATACCAGTTGAAATGTCTGAAAATATCGGTCTTGAAAATGAAGGTATTGGATATAAAGGAACGCATTATTACTTAAATAAGGACTATAAACTGGTAACGATAAAAAAAGGTCAGACACAACGTCGATGGAATAAAGTTGAAGTTATATATGCTTCTGGGTTTACGGTTTATAAGAGTTACGTTGATGAAGATAATAATGTAGTGTTCTTAGTTTAAAATCTGTCGATGTCCAATAAGCAGTTTTTACCAGTAGATCGACAGATGTGATAAAGCCTTATGTAATAGTTTTTCTAGAGATTCCAATTAATTTAGACTCAAAATGATGATATGTTTTGGGAGGTCGATAGAAATCATATTACAAAGCATTGATGTATAAGACTTGGCAAGTGGAACT # Right flank : CGCTCTCTAATAGGGGGTGTACATATCCTTTATTTAACTTACGAGAATATACGATATTAACCATAAAGATAGAAAGTGTGAAAGGATGAATGAATATTTAGCTAAATCTTTAGACCAATCTGAAGGAAATCATTGTGAGACGATCGTTGAACATACTAATAATTTGTTAAAGCAATATAGTTTATTAAAGCAAGCTTATCCAGATATATTTCAAAATTTTTGGCTTAGTCAAGATCGATTTAACGATATGACAAAACAGGTAGATATTCGTAGTAAAGACGATTGGCGGCTTTTAGAAATTGCTTGTAGCTATCACGACTTAGGAAAAATGAACCTACGCTTTCAGAAAAAGGTAAAAGCAGGGCAGAGCTTTTGTAAAGGTGAAATTCCGCATGCATTGTTAAGTATTACGATGCTTCCAATTGATGAATTACAGAAGCATTATACTAAAGATCAAATCATAGCATTAATTTTTGCAATAAAGTGGCACCATGAACGTA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAACTTAAGAGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //