Array 1 6247-2375 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCHI01000027.1 Sinirhodobacter hankyongi strain BO-81 contig_27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6246 29 100.0 32 ............................. AGGCCGAGGCCGCGTATGCAGTTGAGCGTGCC 6185 29 100.0 32 ............................. ATCTGGCCGGGATTGCCGGGCGTAGGTGCTTG 6124 29 100.0 32 ............................. GTCTGTCTGCAGCAATCGGAGTCGTATGGAAC 6063 29 100.0 32 ............................. CACCTCTGGGATCTGACCGTCACGACCGGATC 6002 29 100.0 32 ............................. GCCGCATTTTCGGCATTCCGCACGGCCGTGAA 5941 29 100.0 32 ............................. GGCTCCCGCAAGAAGCGCCGCCGCTCCGGCAT 5880 29 100.0 32 ............................. GAGTTCCGATGGCGACGACACGCCATCGAAAC 5819 29 100.0 32 ............................. TGCGGATTGCTATCCACGAGCGCCCGCATCTG 5758 29 100.0 32 ............................. GGGCACGGCTTAAGTTCATGCTCGCTCATGCG 5697 29 100.0 32 ............................. ATCACCAGTGAGCTACCGCTTGGGGTGCAATA 5636 29 100.0 32 ............................. GGCCCGCAGATCCCGTCATCGACCAGTCCGGC 5575 29 100.0 32 ............................. CAGGACCAACAGTCCCCCGGACCAACAGTCCC 5514 29 100.0 32 ............................. CGCTGCAGGCTGGGCCGACCTCGGACTGACCA 5453 29 100.0 32 ............................. GTCGATGGCATGACGAAGCAGATCGACAGCCG 5392 29 100.0 32 ............................. AGAGAGACCGACCGTTGCCGATCAAGCTCGCG 5331 29 100.0 32 ............................. GAGCGATTTTCGCCAGTCTGGCGAAAAATCGC 5270 29 100.0 32 ............................. CTGACGGATGAGCAGGCCGCAGAAATCAGGTC 5209 29 96.6 32 ............................T CAGCGGGCAGTGTTCGATACGTTCTACGAGGA 5148 29 100.0 32 ............................. CACCGCCCGCGAAGGTAGCATGAACTGGATGG 5087 29 100.0 32 ............................. CCCAGACTCTGGGGATGCGGTCGCCCTCTGTC 5026 29 100.0 32 ............................. CAGAGTCAGAAGCTACTAGCGTAGCTGTGCGC 4965 29 100.0 32 ............................. GGGCTGCTGTTGCGGTTTTCCATTTTCTCTCT 4904 29 100.0 32 ............................. TGGCATCGCAGATCTTGGATTGGCTCAGCGCG 4843 29 100.0 32 ............................. GTCACGAAGCCGTAGGGCCACAGCGACCAGTT 4782 29 100.0 32 ............................. CTCCCGCTCAGCAAGCGCGGCAGCGGCAGCAT 4721 29 100.0 32 ............................. TCAAACCGTGTCCGTTCTGTGGTGGCGCCAAC 4660 29 100.0 32 ............................. AGGCGCCTAGTGGGCATATCAGACCGGGCGTC 4599 29 100.0 32 ............................. ATCGCGCGCGGGATCTATCTCGGCGAGGAATG 4538 29 100.0 32 ............................. ACGCCGATGGCGGCACGGATCCAGCAGGTGAT 4477 29 96.6 32 ............................T TCATCGAGGATCTGCACCGGGAAATCGAGCGT 4416 29 96.6 32 ............................T TCGCGCGCGGACCTGCGGGCGGTTGCGGCTGG 4355 29 96.6 32 ............................G CGGACATACTCGCCGTTGGCGTTGCTGCCGCG 4294 29 100.0 32 ............................. TCATGTGCGGAAAGCGGCATCCCCTAATGCCG 4233 29 96.6 32 ............................T CATGCGCTGGCCTTCCTCGGCGCCAACTTCGA 4172 29 100.0 32 ............................. TTATTGCGCACAAAGCTCGTGATGACGGTTCC 4111 29 100.0 32 ............................. TGATGGCTGATTTGCCCGCCCCCGTGCTGGCC 4050 29 96.6 32 ............................T GCCCCACGCATACATGGCGCGGACCGCCTTGA 3989 29 100.0 32 ............................. TCCGAACGATGCGACCACGCTCGATGGGATCG 3928 29 100.0 32 ............................. TCGTTCGGGCTGTGGTGGATGATCGCATGCGG 3867 29 100.0 32 ............................. GGCCAGACGATCCGCTGACCGCCATCTGTGCC 3806 29 100.0 32 ............................. TCGACCAGATGCCCGACGCGCCCGCCGCTGCC 3745 29 100.0 32 ............................. GGCTGGCACGCATTGCCAACGCGCAGCTCACC 3684 29 100.0 32 ............................. GGCAGCGCGAATACGACGGGCCTGCGAAATAT 3623 29 100.0 32 ............................. CGGTAACGACGCCATCGGGATGCGCGCCATCA 3562 29 100.0 32 ............................. CACGCCGGCGAGGTCACGGTGGTGATCGACGG 3501 29 100.0 32 ............................. GCCATGAGGATCTTGGCGCGGGTGTCGATTGC 3440 29 100.0 32 ............................. GGGTATTGCGGCAGCGTCGCCGGATAGATGAC 3379 29 96.6 32 ............................T TATCGCTGGACCGGCTGCTCTTTCCGCCGACG 3318 29 100.0 31 ............................. ACGACCCCAGAAAAAATCGTGACCAATAGGA 3258 29 100.0 32 ............................. CTACGACGAAGCTGTCGCCGCGGCCAAACGCG 3197 29 100.0 32 ............................. GGACTGGCCGTAGGCGGGCGCGGCGAAAAACC 3136 29 100.0 32 ............................. CCCTGCACGGTCCCGGTCGAATCTAGATAGCG 3075 29 100.0 32 ............................. CTCCTTCTTCATGTCGATCTGGGCGCGCTCGA 3014 29 100.0 32 ............................. ATGACGGCCGCGGCGCTCTACCCGACAGACGT 2953 29 100.0 32 ............................. TGCATACAGGAACAAGGGATGCGGCGCCCCAC 2892 29 100.0 32 ............................. AGGCTGTCCAGGGCGGGAATTTTCTGCACCCT 2831 29 100.0 32 ............................. GCCCTCGACGAGCTTCGTGAGCGCCTGCGCGC 2770 29 100.0 32 ............................. CCCGGCTGTTGCGCGGCCCGATATGGTCCACG 2709 29 100.0 32 ............................. TGGATCCTCGGCATGCAGCGCCGCGCGCCGCA 2648 29 100.0 32 ............................. CGCATCATCATGCCCGACGGTCGCGACATCGC 2587 29 96.6 32 ....A........................ CGGGGCATCACGCTCGCGACCTATCGGCGCTA 2526 29 100.0 32 ............................. GCCCCCTCGGGGATCGTTCTGCACTTGGGCCG 2465 29 89.7 32 .......T............T.C...... GATGTGGTGAGCATGTCGTCGCAGCTTGATGC 2404 29 75.9 0 .....T.....G..T.........A.GTG | T [2378] ========== ====== ====== ====== ============================= ================================ ================== 64 29 99.0 32 GGCTCCCCCGCACCCGCGGGGATAGACCC # Left flank : GCCGCGAAGCTCGTGACCGAGCGCCCGTCAGAGAACATCGAGAGAGTGACGCGCCGGATGACCGGAGCAGCCCTCGCCAAGCAGGCGATCATCCCCGAGATGATCGAGCGCATCAAGGCCCTGATCGAAGGCCGAGGCCCCTGATGCCGCTGACCATGATCGTCACCCGCGACGTCGAGATGCGGTATCGCGGTTTCCTGACCTCGGTCATGCTGGAAGTCTCGCCCGGGGTCTATGTCGCTCCGGAAATGTCCGCCGCCGTGAGAGGCCGCGTGTGGTCGGTGATGACCGATTGGTGGACCGCACTCGGTCGCGGCTCGCTGACGATGGTGTGGCGCGATACCAAGGCGCCCGGAAATCTCCGCATCGAGACATTGGGCGAACCACCAAAGACAATCGTTGACGCGGACGGCATTTTACTCGTTAAACGAAAGTAGCCGGCAAGAAACTCGCCTTCTGTTCTTTGAAATCGTTATGACTTCAGTGCTTTAGGCCTGAGA # Right flank : AATTCTCATACTCTCTCCCGCCTGCCCCTGACCGCGCGCCAGATCTGCTCGGGCCAGCGCAGCGGGCTGTCGAGCAGCAGCGCAACGGCGAAGGCGAGGATCAGCCAGGGCGGGCTGGAGCCCTCGACCACCACGCTCTCGACGCGGCCCGCGCGCACGGCATTGGCGTCGGCCGATTGCACGACGTCACGGCCGGCGCTGGCAGTGCGGATTGCCTGATCGCGCTGCGTGCTGGTGCCCAGCGTCTGCGCTGCGGTGCGCGCGGCCTGCCCGTTCGCGGCGACCTTCGGGCCGCTCAGCAGCCCGGGCAGCGCGCCACAGGCGCCAAGCGCGAGGCAGAGCGCCAGCGCGCCCCCTGCCCGCCTCACAGCCCGCTCAGGCACAGGTCGCGCTCCGCCTCCCGCCGGCGCACGAGGCCGCGCACCACCTGCCCGCCTGCCTTGTTCCAGAGCCGCAGCGCGTCGCAGGCGCCGCGCAGATCGCCCGCCCGGGCCCGGCGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACCCGCGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //