Array 1 32279-29067 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEMB010000022.1 Acinetobacter baumannii strain MRSN63 MRSN63_contig00022, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 32278 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 32218 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 32158 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 32098 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 32038 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 31978 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 31918 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 31858 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 31798 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 31738 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 31678 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 31618 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 31558 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 31498 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 31438 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 31378 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 31318 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 31258 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 31198 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 31138 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 31078 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 31018 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 30958 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 30898 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 30838 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 30778 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 30718 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 30658 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 30598 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 30538 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 30478 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 30418 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 30358 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 30298 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 30238 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 30178 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 30118 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 30057 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 29997 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 29937 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 29877 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 29817 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 29757 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 29697 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 29637 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 29576 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 29516 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 29456 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 29396 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 29336 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 29276 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 29216 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 29156 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 29096 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //