Array 1 65391-64352 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLPX010000002.1 Anaerotignum sp. MSJ-24 M-24_ctg0028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 65390 32 100.0 33 ................................ GATGACTTTATAAATTGATGTGTCAACTGTTAC 65325 32 100.0 35 ................................ AGTGATGCGGATTTACCGTTTTTAGGTACAGAAGC 65258 32 100.0 36 ................................ TTCGATTCTCACATAAATGCCGGGTATGTCCGCCCA 65190 32 100.0 36 ................................ CGCACTAACCTTTTTTTTGATACAGTACCAGTAAGT 65122 32 100.0 35 ................................ GATGTCGTTAAAATCTAATTCAGCAGCACGCTTTT 65055 32 100.0 35 ................................ GACAAAGAATTTCCCGCTTTTATGCAGAATATTAA 64988 32 100.0 36 ................................ TGGTTATTCAGACAGCTTAAAAGGCCATGTTATTGA 64920 32 100.0 35 ................................ AAGCATGAGCACTGAAGCAGACATGTGGCGTGACA 64853 32 100.0 37 ................................ GATTGTTACATACGTCAATGCAACATTTTATCCTAAG 64784 32 93.8 35 .....A..................A....... TACGCCATATCGGCGTCGGACTGTATGCTGACATC 64717 32 93.8 34 .....A..................A....... GCCCTCAAAGCAAGCAAATTGTAAAGTATGGATT 64651 32 96.9 36 ........................A....... GACATGAGATTTTTACTCGACATAAAACAACCACAA 64583 32 93.8 35 .....A....A..................... GAATTCTGACAAGACAGATAATGAAAAATATTTAC 64516 32 90.6 36 .....A..................A..T.... ATTAAATATGTTTAGTGCATCATCCTTATTACGTAC 64448 32 87.5 34 .....A....A.............A..T.... ATTAATTCTATCATTGCTTCATACATTTCAGATT 64382 31 71.9 0 .....A.C....-..TT.A....TA......G | ========== ====== ====== ====== ================================ ===================================== ================== 16 32 95.5 35 GTCGCGATTTGCGTAGGTGCATGGGATGAAAA # Left flank : AGCAACAAATAGAATATAAGGCGGAAATGTATGGGATTGTTGTCAGAAAAGTTAATCCGTATCATACATCACAGATATGCTCACAATGTGGTCATTGGGAAGAAGGCCAACGAAAAAGCCAGTCTGAATTTGAATGCAAAGCATGCGGATATACAGCGAATGCCGATTTTAATGCTGCACGAAATATAGCACTTTCAACTGATTTTGTAAAAAAATAATTTATAACACAGCAGTAACACCATAAAAACTAAATTAACTGTTTTTGTTACTGTCTGCGGGCGATTTCACGTCCGAAATATGAGGGTGTAAAAAGAAATTTAAGTATTTTTGCAATATCCACTCATAAAACCGTGCATCTACATAAGTTGCGAACAAGTGCGAACCGTAAGCTCACATTGCATTTGCGCCGATAATTAATTTGATTGTGCCGAGCTTTTCTTGAAAAGTAACATTGCTGTGCAATATATGGTATCGTACATTACAAAATGTTGTGCTTTGCT # Right flank : GAGCTCAGCGTTCGGGACGTAGATACCTCAGGCTCTGTTGTAATTTGCATAAATATAATCAATATATTAAAATTAAAAGGGAAAGTCTGAATGATTTTCTCAGTTTGCATACAAAGTGGTATTTAGCCGTTAGTGATATGTACCCTCTTTACTGGACAAACCAGTAAGGAGGGTATTTTTGGCGCTTATAGCATGAATAAACCACTGGTTCTGCCATGGGTAGATAAAAATACCTTGGTAAATAAAAGCCTCCGTGATAGTATAAGTGAAGGTTTAGCCACCGCATCACATATAGGAATCAAGGAGGTTTTTACAAGAAAAGTGAAATAAGACATACAGCACATTCAACATACAGATGTGAATATCACGTGATATTTGCACCGAAGTATAGAAGAAAGATAATCTATAAGGAATTAAAACGTGATATAGGAGCAATACTGCAAAATATGTAATGAATTAAAAGTAGAGATAATAGCAGCAGAAGCATGCCCAGACCACAT # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGATTTGCGTAGGTGCATGGGATGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.90,-1.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [19-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 88103-84767 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLPX010000002.1 Anaerotignum sp. MSJ-24 M-24_ctg0028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 88102 33 100.0 35 ................................. GGATAAAGTACAACTTAACAACGGATACTTTTATG 88034 33 100.0 34 ................................. AGCACAGAACATCTTTCGTATTTCCTTGTTATGG 87967 33 100.0 33 ................................. ACCCAACCGTTCACGTTTTTTAAGAGCTGCGTC 87901 33 100.0 34 ................................. TGTTTTTAATCTACGTAACATGGCTACACTCATA 87834 33 100.0 37 ................................. AACTTTGTTCTGTACTGATGTGTCAGTGTCATAAGTT 87764 33 100.0 33 ................................. ATAAAGCTGTTTAATAGTCATTAACACACCTCC 87698 33 100.0 35 ................................. ATCATTACAAACATCGAAACACTTAGGCAATTAGC 87630 33 100.0 34 ................................. ATATCTATAAGCTATTGTTTAATTATTAAACGAT 87563 33 100.0 35 ................................. TCTAATTGGTCAGCTGTAACAGATGTTATACGGGA 87495 33 100.0 34 ................................. AACACCGCCGACAAGCTGTTCATATTCCGCATAA 87428 33 100.0 33 ................................. AATGTAAAGCTTGAGATGGACAGCCTTAATGAA 87362 33 100.0 34 ................................. ATTATCGCCGGCATATAAGTTTCCCTTATACAGT 87295 33 100.0 35 ................................. CCTGATAGTCCTCAAAATACATCATGGGGCATATG 87227 33 100.0 34 ................................. GGAGCTTAAAAAGGATGATGCACAGTGAAATATC 87160 33 100.0 36 ................................. GCTGCCTATACTTATCGAAAAAGGACCGGAGATAAT 87091 33 100.0 34 ................................. ATTGAGGAAAGACCGTTAAACAAAGCGGCGGCAT 87024 33 100.0 35 ................................. ATTTTCAAGTTGCACTGAAGTTTCAACTGACTTAA 86956 33 100.0 35 ................................. AGCTTTTGTATACCTCCGTCAAGTGCCAGTGTAAC 86888 33 100.0 34 ................................. AGTGGTATCTGGATGATGCAGTTATTAAAGAAGC 86821 33 100.0 37 ................................. ATTTGTATTGTCGTTATGTGCAGCAATAGGCTCAAGG 86751 33 100.0 33 ................................. ACTTTCGGCAAGATATTTGTTCTGTGTATCGGC 86685 33 100.0 34 ................................. AAATTACTTGGAACTGATGTCACCTTAACATTAC 86618 33 100.0 34 ................................. ACCCCACCCCCACCAATGGACGCTGTATTAAAGT 86551 33 100.0 34 ................................. GTATACAGTGACCGATGAAAATGGAAAGAAAAGG 86484 33 100.0 33 ................................. GCAAGTGCCATTGGTGTTCAAGTTAAAATAACG 86418 33 100.0 34 ................................. CGCATTAATTTTATAGTGTTACGTTTCCTTGTTT 86351 33 90.9 34 ..........AC........C............ AAAATTATTACTCCACGAACATTTACCAATTGCA 86284 33 90.9 36 ..........AC........C............ AATACCACCGAAACAGGATATACTACCATCATAGGT 86215 33 90.9 33 ..........AC........C............ GGAACTTACAACCTTCCCTGACTTGTCATAGCT 86149 33 90.9 34 ..........AC........C............ TGTGCTTGTCATAACTTCACCGTCCTTAACGTGT 86082 33 90.9 34 ..........AC........C............ AACTTTGCCCGCTGACTTAGCATTAAATCTAAGC 86015 33 90.9 34 ..........AC........C............ CTAACTATGCGTGGCGTGAACGAGTAAAGACACT 85948 33 90.9 33 ..........AC........C............ CAAGAGTATAAGACCGGGCATATCACGACCATT 85882 33 90.9 34 ..........AC........C............ CTAACTATGCGTGGCGTGAACGAGTAAAGACACT 85815 33 90.9 33 ..........AC........C............ CAAGAGTATAAGACCGGGCATATCACGACCATT 85749 33 90.9 35 ..........AC........C............ AGCCTTTTGTCGTTACAGGTAAGGAACTCTTACTT 85681 33 90.9 34 ..........AC........C............ CTTCATTATCGGTTTATCATCAACCGAACCACAA 85614 33 90.9 34 ..........AC........C............ GATGAACTTGTTGACATTGTTTTGGAGTTTTTAG 85547 33 90.9 37 ..........AC........C............ TGTTAAAAATGTTGGAGTATCTTTGGCGTACAAAGTC 85477 33 90.9 34 ..........AC........C............ ACCCACCTAAACATTTGTACCCCAACTGCAACAA 85410 33 90.9 36 ..........AC........C............ TGTCGTTTGCCCCTGCCACTTTATCAAAAAATGAAC 85341 33 90.9 34 ..........AC........C............ ATCATTTCCGCTGTGGTTTTATTTTTGTCATAAA 85274 33 90.9 34 ..........AC........C............ TTGTATGGAATATTTGTTGTTGGGCTTATTGTCA 85207 33 90.9 35 ..........AC........C............ AAGTTTTCTGGAACTGTTGTCACCTTAACATTACC 85139 33 90.9 34 ..........AC........C............ ATATTCGCCCTGTCACTTAAAGCGGACAGAAAAA 85072 33 90.9 36 ..........AC........C............ AAGAGATTTAATCGACACAGCAACACTCACAGAATT 85003 33 90.9 37 ..........AC........C............ AACAACCGTAAATAAAAAATGTCTTGCCATTGTTAGT 84933 33 90.9 35 ..........AC........C............ GTTATCATCTGAGAATAGAATTCAAATTTATCATC 84865 33 93.9 34 ..................A.C............ TTATTAAGTGTGATGTGGGACAAGTTTTATATGT 84798 32 75.8 0 ....................CA-...G..CCGC | ========== ====== ====== ====== ================================= ===================================== ================== 50 33 95.4 34 GTCGCCACCCTTATGGGTGGTGTGAGTTGAAAT # Left flank : TTGATTACTTATGATGTTAATACACAGACCGAGGCCGGAAGAAAAAGACTGAGAAGAGTAGCTAAGGAATGTGTTAACTATGGTCAGCGTGTGCAGAATTCGGTATTTGAGTGCCATATGGATACAACGAAATGCAGACAGGTTAAGAACATTCTTGAAAAAATAATTGATAAAAAAGTTGATAGCCTAAGATTTTATTATTTGGGCGATAATTACAAAAATAAAGTTGAGCATATAGGAGCTAATCCTGGCTTTGATGTAACAGATACACTGATAATGTAGTTGTAAAGTAAAGTATTTCCGATTAGGTGCGAATGTTGAGTACACATAAATTATAGACTGTATTCGCACCGGAATTTGTATCTGAAAATATATTTTTTGTATCAATTTATGAAGATATTATGGTAAAATAATATTAATATTGATGCCGCTTTGAAGTTTTTTGTAAACTTCGGTGGATGTAATATGCAGTTTCGGATATGTTTTTGTCTGAAATTGCT # Right flank : TTATTTTTTGCAGCTCTGCATTATAATATTAATACGGTCTTAAGATATAATGTCTACATATTGAAAAAACATTTCAGATAATTTTATATTCAAATTATTTACATAGCATGAACTGATATTGATTAAATATTGACAGATTTCCGCCACTTTTATATAATATACATAACAGTTTACCGACATAGATGTTTCAGTTCTGCACAAGGGAGCAAGACTTTTGTGTTTTTTTGTGTGAATGTGGCATTGTGCGGCTGTAAATATTTTAATCCATTATGGAAAGGAAGAAGAAAGAATGAAGAAATTTTTAGCTTTATCACTTATTGCTGTTATGACAGCAGGCGTACTTGCAGGCTGCTCTTCAAAGACAGAAGAGAAACCCGCTGATGAGAAAAAGGAAGAAACAACAGACGGCGAAACAACTGCTGACGGCGAAACATATATCGTTGCAACAGATACAGTTTTCCCTCCCTTCGAGTTCACAGATGCAAACGGTGACTTCGTTG # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.78, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCACCCTTATGGGTGGTGTGAGTTGAAAT # Alternate repeat : GTCGCCACCCACATGGGTGGCGTGAGTTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.50,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //