Array 1 18749-15945 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABKKH010000004.1 Prevotella sp. PJ1A PJ1A_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 18748 47 100.0 30 ............................................... GCGTTCAATATTATACAAACTCGGCATTAC 18671 47 100.0 30 ............................................... AACTTGATAATAGGAGTGAAGACAGCAGAT 18594 47 100.0 30 ............................................... CGTGTCTTACTGTTCGACGGAACCGCCGGG 18517 47 100.0 30 ............................................... ACAATCCCGGTTCCGCCCGTCATTTGTAAG 18440 47 100.0 30 ............................................... AGGAGCATAACCCAACGACGTAGAGGGATC 18363 47 100.0 30 ............................................... CAGCTCGTGGCTCTTGACCTCGGCGAGCTT 18286 47 100.0 30 ............................................... GAATTTTTCTGTATCTTTGCAGCGTGTTAC 18209 47 100.0 30 ............................................... TTCGTTCATTATCTTTTTATGCGCACTCGC 18132 47 100.0 30 ............................................... ATACATCAGGGCAATTATGCTAGACAATCT 18055 47 100.0 30 ............................................... ACTTGTTTCAATGGTTCCGATGCGTAAGGC 17978 47 100.0 29 ............................................... TACTCTTGTTGCAATTAAACTCATTGTTT 17902 47 100.0 30 ............................................... TCGGAACTCTTTCACATCAAAAGTAGGTGA 17825 47 100.0 30 ............................................... ACTTAAGCGTTTCTAAATCCCGGCGTTTGG 17748 47 100.0 30 ............................................... GTACACCTTGCAGAATTGGGTAACACCACG 17671 47 100.0 30 ............................................... TTATTGGTCCGGAGGGACAACCTGTACAAA 17594 47 100.0 29 ............................................... TCGTCAATCTCGGCAATCTGTTTTTTTGT 17518 47 100.0 21 ............................................... ACAAAAAACCGGGACGTCAAA Deletion [17451] 17450 47 100.0 30 ............................................... CCTTGTGCAATGCGTCCTCAACGTGTGCGT 17373 47 100.0 30 ............................................... CGGCTGGCCTTTGTCGTCGCGCAGCTGCTC 17296 47 100.0 30 ............................................... TCGACCGTCATGCCCGGCAATATCTCAAAT 17219 47 100.0 29 ............................................... TTGGTAAAACAAATACCTATGGAAATTTA 17143 47 100.0 29 ............................................... TTGTATCTCAACCCTCAAACGAATATCCA 17067 47 100.0 30 ............................................... TAATTAAGCCGGACAATTACGAGATACCGC 16990 47 100.0 30 ............................................... TTGCGTTATCGAAATTAAGAAATTCGACAG 16913 47 100.0 30 ............................................... GTACTCATCAATGAAACGCTTTGCTTTAAT 16836 47 100.0 30 ............................................... TTTGCAAACGTTCCTTTTCTGCCTGCAAAC 16759 47 100.0 30 ............................................... TTGCGGGTCAAACGCTCTAAATAGTCGGAC 16682 47 100.0 29 ............................................... AAGTTCATATATCTTTTCTTCCTCATTTT 16606 47 100.0 30 ............................................... GCCGCGCATGGCCAGCAGCACGCTTTCACA 16529 47 100.0 30 ............................................... GCCATCGTATCATTGCTGAATTGAATGATT 16452 47 100.0 30 ............................................... TACCGTGGCGGGGTCATAGTCCGCGTACAT 16375 47 100.0 30 ............................................... TATGTGGGCGTTGTATAGTATCATTGTTTG 16298 47 100.0 30 ............................................... TACTTCTGTAGATGATTTTGTCGCAGGTCT 16221 47 100.0 30 ............................................... TGGAAACAGCACTGTGCTGATGTGCAGACG 16144 47 100.0 29 ............................................... TCTCCGTTTTGGCTTCATTCTTCTGCTGT 16068 47 100.0 30 ............................................... CGCAAATCAAGATTGTGGGACACCGCGACC 15991 47 97.9 0 ...........................................T... | ========== ====== ====== ====== =============================================== ============================== ================== 37 47 99.9 30 GATGTTAGTCTCAATGCAAAGATACGAATTTTAAAGCAAATCACAAC # Left flank : TTTGGTGTTTTTCGATTTGCCTACCGAAACGAAGAAGGATAAGAAAGAATATGCCTTGTTTCGTAAGAATTTGCAGCGCGATGGATTCACCATGTTCCAGATGTCCATCTACGTACGGCATTGTGCAAGCATGGAAAATGCTGAGGTTCATATAAAGCGTGTCAAGGCGTTTCTTCCAAAGTTCGGGCATGTGGCCATAATGTGCATCACCGACAAGCAGTTTGGAAACATCAGCGTGTTTTATGGAACAAAACCGATGGCACCAAATGCACCGGGACAGCAACTTGAACTTTTTTGATTTTTTAACTTCAGAAGATGGAGTTTGTAGCTCATTTTGTCTCGTTTTTATAGGATGAAACAAACCGAATAAGATAATTGCTGTTTATATTACACTAATGGAATCCTGCATTAATGCAAGATTCCGTTAGCAAGACATACATTCTTTTCTTTTTCTGATTTCTAAGATATATCTTTGATATACAGAACGTTACATCAACTGT # Right flank : TCACGCGTGTGTGGATGCCATCGGAGGCGCACGGCTGAACCGTTCCACGCTTTTTTTGCTAAATATCCTTAACGAATAAAACAACATTCCAGATATTTAATTATCTTTGCAAAAACTATTTGCGGGGTGTTACTATTATTCGCGCCCCGCGCGGTCTTAAGGAAGTTAGAAGAACTTCACCGTTACGGTGATTATTCTTATTTTCCAAAACCGCAACACAATTTTTACGCTCATTGTATCAAATGGTTTTTTGGACGGTTGAGGCCGCCCGCCTTTGCCTGCAATATCGCAGGACTTTAACAGGGTGTTGGTCGCACCCTGTTTTTTATCGTCTCCGCGAATCACTTAAACGTGTCGTTGGGATTACGTGCCTTATCTTATATACCGCTTATATGCACCCGTGCGGCCTGATTGTATTATACTGTAAGGCAGAAGCCTTGTGTGTTTCTGTAATTTCATTCATAAGTTCAAATTCTATGAGAATAAAAAATTGTAGTGAA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGTTAGTCTCAATGCAAAGATACGAATTTTAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.70,-1.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //