Array 1 53798-51525 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXCF010000006.1 Prevotella histicola strain SCHI0034.S.5 Contig_6_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 53797 47 93.6 30 A........C............A........................ AATGGAAGATTACGGAAAATCTTACCTTCT 53720 47 100.0 30 ............................................... ACCTTCTTATTTTTAATGTCTTCTGCGACC 53643 47 100.0 29 ............................................... ATTCGTTATCGCGAGAAAGGAGCGTATAA 53567 47 100.0 30 ............................................... CCTGACAGAAATAACTGTCTGGGTAAATAG 53490 47 100.0 30 ............................................... TAAATGACCTAGATCCTAATGATCGTTACA 53413 47 100.0 30 ............................................... AAAGCAAAGCGAGAAGTCATGTAAAGCGAG 53336 47 100.0 30 ............................................... ATAGTATCCTCTAAAACTATCAGCGGTACT 53259 47 100.0 30 ............................................... CGGGTGTGTATGAGAAAGAGATTGCGACAA 53182 47 100.0 30 ............................................... TATAACTTTCTCCGAGACTAACATTCTTTT 53105 47 100.0 30 ............................................... ACATTTCCTCACCTAACTTATTTCCGAAGT 53028 47 100.0 29 ............................................... GCCAAGCATCAGAAGCTTTAGGAATCTCT 52952 47 100.0 30 ............................................... CGTGGAAGAGCATCTTTAAGCTTTGAAATA 52875 47 100.0 29 ............................................... CACATACAAAATGAATATGAATACAGATA 52799 47 100.0 30 ............................................... AAACTACTTTTAAGACGACAAGTAGACTGA 52722 47 100.0 30 ............................................... TTAGTGGGCGTATAACCCATATTGAATTGA 52645 47 100.0 30 ............................................... GGGGAACAAATCTAGTAAACATAATTCAAA 52568 47 100.0 30 ............................................... AACGATGAGATTATCAATCGTTGAATTATA 52491 47 100.0 30 ............................................... CATTCGCAAGCCGAAAATCGCAACTATCAG 52414 47 100.0 30 ............................................... ATATATGGTTTTTTTGAATCAATAAATTCC 52337 47 100.0 29 ............................................... TAAAAGCAAGACTAAATCCGTACTAGAGA 52261 47 100.0 30 ............................................... TCCTGAACAAAACGATAACGCTGCCAAGTA 52184 47 100.0 29 ............................................... ACGCACACAGAATAAATAATCAGGAGAAG 52108 47 100.0 29 ............................................... AGTTAGGAGTATCGATATTTGCGGATACA 52032 47 100.0 30 ............................................... ATATACCACAGAATACTCTGAAATATATTA 51955 47 100.0 30 ............................................... CGCAACATGACATCCGAAGAAACACGAATA 51878 47 100.0 30 ............................................... GGAGTATCACGAATAAGATTCCGCTGATAT 51801 47 100.0 30 ............................................... GGTGTGGGATCTTCTACAAAAGGAAGAACA 51724 47 100.0 30 ............................................... CACCATTACGGATAAGTTGACGCATGTCAG 51647 47 100.0 29 ............................................... TATTTCATTGGCAAAACAACAGGCATTTA 51571 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 30 47 99.8 30 GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Left flank : TAGCAATAACAATAATTATATATAGTAGAACAAATCTACCACTACGTAAAAGAAGAAAAGGGGGATAAGAAAAATATAAAAAAATAAGGCCGCTAAAGAACGACCTTGGGCGGTACACGATCTTTCGACCCTGTCCCTAAACCATATTACTATGATCTGATGCAAAGGTATATAATTAATATTAAACTCCAAAATCTAAATCTCTTTTTAAAGTTAATTAGCATTAAAAAGCCCGTTGTGATTCGCTTGAAAATACGTACCCTTGTGGTAGCAATAACAATAATTATATATAGTAGAACAAATCTACCACTACGTAAAAAAAAGAAAGGGGGATAAGAAAAACATAAAAAAGTGGGACGCTTAGAGCGCCCCTTGATGGTACACGATCTTTCGACCCTGTCCCTAAACCATATTCTTATGATCTAATGCAAAGGTATATAATTAATTTTATACTTCAAAATATAAATCTCTTTTTTAAATTAATTAGTATTAAAAAGCCC # Right flank : TCAAGTAGCGTAAGAAGGTGGTTATCAACACTGTAACACCTACTTTGAGAAAAGAAAAAATGCAAGTAAAAATAAAGTTCCACCATTAGAAGTGGAACTTTATTTATTTCTAAAACAGCTCTAATTGGACTCCAGGAGCATTTGGCTTATGCGGTTTCTTGCCATAAAAAAGTTTAATTTCTTCAAACTGTTTATCAGTTATACTCATTATTCCAACTTTCCCATACACAGGAATAATGGTTGACACCCTCTTAATATGCACTTCCATGTTTTCTTTACTACCACAATGGCGTATGTAAATAGAGAACTGGAACATTGTAAATCCGTCTTTTAGCAAGTTCTGACGAAAGAGTGCAGCAGCCTTTCTCTCCTTCTTTGTATCTGTGGGTAAGTCAAAAAACACCATTAACCACATACTCCTATATTGACTAAATCTATAAGTTTCCACTGAAGGGGATTATAAATCAGGATACAATATTCTTCTTTGCTCACCATTAAAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //