Array 1 17576-16011 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065155.1 Lacticaseibacillus paracasei subsp. tolerans strain ZY-1 plasmid pLPZ1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 17575 32 100.0 35 ................................ AATTCTAGTGTTAATGCCTTAGGCGCCATTGAAAT 17508 32 100.0 35 ................................ ATTGCATCACCGTCTGGCGTGTCTGTTTCGGGCCC 17441 32 100.0 33 ................................ TTGATAATCAGTGGTTCCGGAATATCAACTTTA 17376 32 100.0 35 ................................ TCCCAAGCAGTTACTAGCACGTTAACTGGTGCGTC 17309 32 100.0 35 ................................ GTTCGCAAGGTTAAATGGTCGCTCAGCAAAGTGAC 17242 32 100.0 35 ................................ TCCATGGTCGCCTAACCCAGCGGATCCTGAATACT 17175 32 100.0 33 ................................ ACAATCTAGCTTGTCCGATTTGCAACATCAGTT 17110 32 100.0 33 ................................ ATTCAGCAATTCAGCGACCTCAGCCAGCAACTA 17045 32 100.0 35 ................................ ACCAGCACAGACGAGCAGACAATTGCCAATGCAGT 16978 32 100.0 35 ................................ CGTAGTCAGCTCATTGAAGCAGCACAAGCGTACTC 16911 32 100.0 37 ................................ TAGTTGGAGGTGGTTTCATTGGTTGAAGCATCAGACC 16842 32 100.0 34 ................................ CTACAGGCGCGGAGCACAACATGAATTAACGAAT 16776 32 100.0 35 ................................ TTTACCGCGTACAGTTTTTCTTCGCTCATTTTTCG 16709 32 100.0 35 ................................ GCTTGTAACGTCTCGTGTGTTCTCCCAAGCGGTTA 16642 32 100.0 37 ................................ TCCTTTGCCACGGTGTAGCCGTTGACGTAAGCCTCCA 16573 32 100.0 36 ................................ AGCAATAAAGTATGAAACTTGGCCGTCCTCAAACGT 16505 32 100.0 35 ................................ CTAGTAAAGTCTTGGTGCCCTATATAAATACCACC 16438 32 100.0 33 ................................ ATGGTGACAGTCTGACACGTGCTGCTAGACAAG 16373 32 100.0 34 ................................ TTGCCGGTATGATCAGTACCGCAGAAGAAGCAAT 16307 32 100.0 36 ................................ TTCCACCACGTGCCACTATAATCCCACGTCTCGGTT 16239 32 100.0 34 ................................ AAACAACGTACCAATACCGAGAGCAAGTACGAAA 16173 32 100.0 33 ................................ ACATTAGCATTGATTTTAAGGCGAGCAACCTGG 16108 32 100.0 34 ................................ ACTGCACGTTGAGCAATACGTGATGCCATAAAAT 16042 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 24 32 100.0 35 GTCGCACCTCACGTAGGTGCGTGAATTGAAAT # Left flank : GAAAAATTTAAACCTATCGATTCAAAAACTGTTCCGGTTTTAGTCCAGTGGCCTGAATGTCCTGAAAGTGGTCAACTAGTTGCAGAGGTTGAGGCTAGAAAGGACGACTTCGATCAGATTTCTGCACTAATGAAAAAGGCACAACAATTTGTAGTTCAAGTTTATATGGACGGTAGTCAGAAAACTTTGACTATGGGCAATGTCGTTGCCGACTATATTCCTGAGTTTGGATTGTGGATTGCTCGTGAGGGCTCATATAACGATGAGTTTGGTTTGGATCCAGATGGTGGCTCTAAGTTGGGCTTTGATATGTTATAGGGTAATATATAGTCGGGTGCGAATGTGTAGTTATCATCAAAACGTGGGAGACTCGCACCTTTATTTGGTAATTTAGTGTCCATTTATAATGGATTATGTTCTGATTTGCCTACAGGTATTAGTAAATGCCTTTATTAATTCTGCATGTAGTAGCGTTAGCCGCATTTTTACTATATTTTGCG # Right flank : TGGCCACTAGCGATAGTGGATTGAAGTCAATATTTGAGACAGGTTTTAAGAGACATTCAGAACCGCGTTTACCTTCCACAGCTCAAATAAATCATTAATCGTGATTAATAACTTATTTGAACCATGGAAAGCATTAAATCAGGCGGCCATTTGGCTCGTAAGTGTTGCGATTTCAACTTGTAAGGGGGTCTGGTAGCCCAGTGAACTATGAATTCTCTTCCTATTGTAGAAAGCATGCACATATTCAAAAAGGACAGCAGCGGCAGTTTCATAATTCTCAAAGACCGGCACTGGATAAACACATTCCTTTTTGAGGGAAGCGTGAAAGGATTCCATTGGCGCATTATCATACGGACAACCCTTACAGCTGTATGAGTGGCGGATATGTAGTTCAGTTAAACGTTGATTGTAATCATCGCTGGTGTACTGTGATCCTAAGTCTGTGTGGATAATCAGGTCCCCAGTAATGGTTCGATTTTTAACCGCGCTTTCCAGGGTCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCACGTAGGTGCGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.50,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //