Array 1 20106-20622 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZSY01000008.1 Photobacterium angustum strain GCSL-A2-3 CFSAN029423_contig0007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 20106 29 100.0 32 ............................. GTTAACAAGGCTAATTGTATTGGTGAGATCAT 20167 29 100.0 32 ............................. ACGGCACATTTAGTATTAATCAAACCCCTTCA 20228 29 96.6 32 .............T............... ATCTCGGTATTGTATCCACGTATCGTGACGAT 20289 29 100.0 32 ............................. GGATTTTATACACTTCTATGATTCCGATTTAT 20350 29 82.8 32 ..........T.T.T........G....C TTACCAGGAATCAGCTTGATTGAGGCTTCAGT 20411 29 79.3 32 ..........TG..TA.......G....T ATGCAAATAAAACTTCTATCCAAATCGGCTGG 20472 29 86.2 32 A.........T.T...............T CATGACTCTATAAACAGGATAAAATTCATCAT 20533 29 75.9 32 ........T.TCTT.A.......G..... CAAAAAGCGTAACAAACAAAAGCGAGGCGGAG 20594 29 72.4 0 .C......TTT.T..A...........TA | ========== ====== ====== ====== ============================= ================================ ================== 9 29 88.1 32 GTGTTCCCCGCACCCTCGGGGATAAACCG # Left flank : CACTTATCGATGAAGTACTCAGTGCGGGAGATATTACAGCTCCTGAACCTTATATAGATGCGCAACCTCCTGCTATACCAGAGCCAATTACGATTGGTGATAGTGGCCATAGGAGCAAATAGTTTATGAGTATGCTTGTTGTGGTTACTGAAGTGGTACCGCCTCGATTACGAGGACGTCTTGCAGTTTGGTTATTAGAAGTTAGGGCTGGTGTATATATAGGGAACGTTTCTCGAAAAATCAGAGAAATGATCTGGGAACATATTGAATGCCTTGCTGAAGATGGCAATGTTGTAATGGCGTGGGGAACCAATACCGAATCAGGTTTTGACTTCCAAACTTATGGCAAAAACCGTCGAGAGCCCGTTGATTTAGGCGGGTTACGTTTAGTGAAATTTTTACCTGCAGACATGATTACTGAATGAAAAAATGTTCTTTAAAAAGTTGGTAGATCTTCAATGGTAGTAATTTACCTTTAAAATCAATATATTGTATTTAGA # Right flank : AACCAAATTTACCCATTCAATATCGGGGTTTTGATTAGATGTTTTAGGTTGAAGTCTTATAATTTTTTGTGTGTAAAAAGCACTCATAAAGTGTTGAACAAAATAAGAAGATAAATGGCTTTAAAGCTCAAATTTTATGAGAGCTTATACAAATTTAACATTCATAAATAACTTAATTTTGTTCTATTTCTTTTTTAATTCAATAGCGTGTTGGTTTAAGCCTTAAGTGTATTCTTTTACGTGAAAGTTAGAATACTTATTTGCAAGGTTGTTAAGTGCCCATTGAGCTGTAGGACTATGACGAATAAATATGAAATTATTTGAGACTATTTCTCTGAAATTCCCAGAGATAAACGATGTAAATTGCAAAATTCACTTGGCTGTATGGAACGGAAAAGATAATCCACTTGATATTTTCTTAGCTGGAAATTTTGAAGAATGGCAACGCTGGCAATCTAAGCGTAACTTCGAAAGAGAGTTCATTGTTTCACTGATTCAAC # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.40, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCTCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACCAGCGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //