Array 1 34078-32888 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZDT01000067.1 Levilactobacillus namurensis DSM 19117 NODE_193, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 34077 29 100.0 32 ............................. CAATCGCTGGCTGGGACCATTGGGGCCATTGG 34016 29 100.0 32 ............................. CGTAGATTCACCCGTGAAGGTCGTTACAGCGA 33955 29 100.0 32 ............................. TGCCAATTGGGGTCTTTAACATTGCCTTAATG 33894 29 100.0 32 ............................. ATCGTTGACGGGCGCGTACAGGGCCTTGGTGC 33833 29 96.6 32 ............................T ATCGTCCCCGGCCTTAAATGAAGAGTTATTGG 33772 29 96.6 32 ............................T CGTAAAACCGCGATACGTCCACGTTATAAGCC 33711 29 96.6 32 ............................T ATATGTATCGTAAGTCATATCTCGATCGGTAG 33650 29 100.0 32 ............................. TGAATCAGCTTATCAACGTGCGCAAATGCCGT 33589 29 100.0 32 ............................. AATTAATGACCATTCCGTGTAATAATTTTCCT 33528 29 96.6 32 ............................T AAACAAGCACGGTTTAGATGGTCCCATGTTGA 33467 29 93.1 32 ...................A........T CGAGCGGCTAAGGAAGCGACAGAGCCCGTCCC 33406 29 96.6 32 ............................T GACAATACATAATCATCATAAGGGTTTAATCC 33345 29 96.6 32 ............................T GTTCGGGAAAATAAGGCTTGACAGAGTTAAGG 33284 29 100.0 33 ............................. ATTAGAATATCTTTTTCGGATAAAATCTCATAA 33222 29 100.0 32 ............................. GCAATGACTAAGCGTGTGTTCCCCGTGCCAAC 33161 29 96.6 32 ............................T GATGCCGAAAGGCTTAGCCAGTACTGGGACGC 33100 29 96.6 32 ............................T AAGCTATAAACCTTTCACGGGTACACGCATTA 33039 29 100.0 32 ............................. TTGGTGGCAACGCCAACGGCTGACGGTGCAAC 32978 29 96.6 32 ............A................ TACGTGAAGTTGATCGAGGACGCGCTGACGGG 32917 29 89.7 0 .......................A.A..A | C [32891] ========== ====== ====== ====== ============================= ================================= ================== 20 29 97.6 32 GTATTCCCCACATGTGTGGGGGTGATTCC # Left flank : ACAAACAGATTGCCCAATCTCTGAATCCATTACTGCTTTAACGGACATTACGAGTGATCAATTGGAGAGCCAGGGTATTTCTTTGGCGACTGCGTTAACAAAGTTACGTCTGTTCCTACAGAATGTACCGGTAATTGGATATCACGTAACCTTTGATGAGCACTTCTTAAGTACCGGCTGTCGTCAAACTGCCCAACCGCAATTTTCGAATCAGTTTCGAGATTTGATGCCCATTGTCAAAGATGTGCAGTCCTTTTTGGATAATTACAAGTTGGCGACAGTACTGGCTGCCTATCAAATTACGAATGCTCATCCGCACCATGCTTTATCTGACGCTGAAGCGACACTCGAATTAGCTGATAAGTTGATGGAGAATGGTAGCTTTAAGCTTTAGATAGTCATGTTAATTGATGGTATTAAGGTGTCGCTTAGAATAACAAGTTAAATGAAAATACAGTTTCTACGTTTCAAGAACGCCGGTATATCAGTATTTTCTAAGT # Right flank : TCAAAATTGATTCACCACAAACAAATGCAGTACAATAGCCATAACACAAACCAAGGAGGGGCTGTCTATCACAACCGTTGAGGACATCAAAACTGCGATTCGGAATGATCCGGAGAACGCGGTGTACACCGAACAGGGGTGGGACCCGTTATTTCATGTGTTACCGAGTGCTACGATTTTAGTCATTAGTCAGGCACCGGGACGAATTGCTCAGCAGGCCAAGACCTATTTCAATGACGCGAGCGGAGACCGGCTGCGGGACTGGATGGGCGTGACACGCGACCAATTCTATCAGAGTGACCGGATTGCGGTGATGCCACTGGACTTTTACTATCCGGGCAAAGGCAAAAGCGGGGACCTGCCCCCGCGGAAGGGGTTTGCTGAAAAGTGGCATGACCCGTTGCTAGCTATGATGCCCCAGGTCCAGTTGACCCTATTGGTGGGCCAATATGCGATTAAAGCCTACTTAGGTAATAAGCGGTATAAGACCTTGACGGAGA # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACATGTGTGGGGGTGATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 33146-33603 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZDT01000021.1 Levilactobacillus namurensis DSM 19117 NODE_27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 33146 29 100.0 32 ............................. AATACCATATATACCATCACTTACGGCGCTTT 33207 29 100.0 33 ............................. CAAAATACGTGACCTGGTTACCCATACGGGCGT 33269 29 96.6 33 ............................C GCCGTCAAGCAGACTGTTAGCAAGCAATTGTTA 33331 29 100.0 32 ............................. GACGGCTTACAACGCTTACCAGCGCTTGGGGA 33392 29 96.6 32 ............................C CCACCAGAACACGGTACGGGTAGCGGTCATAA 33453 29 100.0 32 ............................. CTATTATAGAAATAAAGGTGACTAACAGACAT 33514 29 100.0 32 ............................. AGGGGGGTAGAACGTACACACACCGGTGCCCA 33575 29 89.7 0 .......T..........A....A..... | ========== ====== ====== ====== ============================= ================================= ================== 8 29 97.9 32 GTATTCCCCGCGTATGCGGGGGTGATTCT # Left flank : ACCAAGGATGAAATCATTGAGATCGGGGCGATTAAGCGAACGGCGACTAATGAACTCATAGAATTTGAACGTTTAATTAAAGTAGATTGCTCAATCCCACGAACCATTACCGCTTTGACGGGCATTACGGCTAAGCAGTTGCGAGATCAAGGTGTGGCTTTGCAGGTGGCGCTTGATCAACTACATGAGTTTGTCGCTGATTGTCCAATTGTGGGGTACAATCTTCGATTTGATGAGATGTTTTTAAGGCAGGCCGTTCGAAAAACTAGCTTGACTGATTTTTCGAATCGAATGTTGGATGTAAAACCGGTTGTGCAACAGGTAGAACTTTTCTTGGATAATTACCGTTTAGAAACGGTTTTGAAAAGTCGCAATATTGAAAATCAGCACCCCCATCGCGCCCTATCTGATGCACAGGCGACTTGGCAGTTAGCGACCCAACTCATAAAAAATGGCGATTTTCGAATTTAGGAATGTTGATTTACCGGGATTCCTTTAGT # Right flank : TTTATCGGGCAATCTAGTGAGAAATAGATAGCTGGGTTTGAAATGTTAATCGTGATACCATGAAAATAGTTTGAAACAAAAGGTTTTCTAACAGGTAAATGATCAAGCGAAAGGGGTCGATTCAATGGCAACCACATTGCCGACAAAGATTGAGATTCGCGGGGCGCGGGTCCATAATTTGAAGAACATTGACGTGGATATCCCACTGCACCAGTTCGTCGCGATTTCCGGGCTTTCGGGTTCGGGGAAGAGCTCGTTAGCCATGGGGATTCTCTACGAAGAAGGGTCGCGACGCTACCTAGAAGCGCTATCGACCTATACCCGACGGCGAATCAAGCTGGGCGCCCAGGCGGACGTGACCAGTGTCAAGCACATTCCGTCGGCGTTAGCCTTGAAACAACGGCCGGCCGTTCCCTCTGAGCGGGCGACCGTGGGAACCATGAGTGAACTGTTTAACATCATTCGCTTGATCTTCTCCCGGCTAGGCTCACCGGTCTGCC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGTATGCGGGGGTGATTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCGCCTATGCGGGGGTGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1233-339 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZDT01000041.1 Levilactobacillus namurensis DSM 19117 NODE_66, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1232 36 100.0 30 .................................... TAGTTGAATCTGCTGGTAACGGTGACTGGG 1166 36 100.0 30 .................................... CGAATTGTTGTTCGGCAATCTTGTAGACGT 1100 36 100.0 30 .................................... GCGACCTTCTGGTTAACGGTCCCTGGCAAC 1034 36 100.0 30 .................................... GACTAAGTCCATCACGAAGAAACAACGGTT 968 36 100.0 30 .................................... TGCAAGAACTACGGGAATTGAGCAACATAA 902 36 100.0 30 .................................... CGAAATGTCGCAAACGACAAACTTAGAACA 836 36 100.0 30 .................................... AGTTCTTGAGACTTGGTTACCAGTTGGCTA 770 36 100.0 30 .................................... ACGAACCGTCAGATAGCTTCCTTGGTCAAT 704 36 97.2 30 ...................C................ TACTGATCGTGGACGACCCCGTTAAGAACC 638 36 100.0 30 .................................... AGATTGCCGACTTCAAACGGCGACACCCGC 572 36 100.0 30 .................................... AACCGTAAAGGCGAACGTGGCCCCCGTGGC 506 36 100.0 30 .................................... TGGGAACGGTTGTTCAGCGCGACAGTGACC 440 36 100.0 30 .................................... TTAGGGCGCCGGTCCAGGTCTCTGGCTTAT 374 36 80.6 0 ..........................T..T.TCCTT | ========== ====== ====== ====== ==================================== ============================== ================== 14 36 98.4 30 GTTTCAAATGAGTGGTAAATCTATAAGGTCAATACC # Left flank : GAAATTGATTTGAACGGTTTATTTCAGCGGAAGTTGCAAGCACAGCTGTTAAAAACGTTATCGAATCAGCAAGTTGTCCAATTAACGGATGATTGGCAGTGACTATTAACTCAAATTCTGGGGACTAGTTATTTGATGGATGTGCCAATGGCTGTTCCAGAAACCCCGGAATTGGTTAAACTAATCAAATTGAGTGGCCTACGATTAGCTGAGGATTCAACGCAAACACCTTATGCTATACTTGAGACGTTAATCAAAACGTTAGAAGAGTTGCATGATCAACGCTTAACGGTTTTGACAAATGTTAGCCATTACTTACAGGTCCCCCAGCTAGAAGCGCTAGGGAAAGTAGTGGCTGAAGCGGATTTACCAGTTATTATCATTGAATTCTCAGAAACTCGACAAGTTAATTACTTTAAGAGTTGCCAGTATTACTACATCGACCGGGATTTTGTTCTATGGTGATTTTAGGTTAGTGATAATTGGATGAGAAAGTAATG # Right flank : TACAATGAACAAAGGTATCATACTGCAGAGTGGTTAATGTTGTTTGCATTGTGCGAAACACGGTTTAATATGTTGGTACAAACTTTTAAAAGAGATAGTTTTAAAATAAATCATACAAAGCGGCTATAGTTTATCCTTATTGAGAAGACAAGGTGACTATAGTTTTCGAAAAGTACTGGTTGTAGCAGTATCGATAGTGGTTATGTTTCGGTGTGCTTTGTCGTTTATTTGGTGAGTGAGTTCGATAATAAGTGGTAAAATTGTTGAATATAGGTTAATGTTTGGGAGATTGCAAGAATTATCCGAACACTTATTAGAACCTCATCTGTTCCCAGAAGA # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAATGAGTGGTAAATCTATAAGGTCAATACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 61160-60827 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZDT01000055.1 Levilactobacillus namurensis DSM 19117 NODE_114, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 61159 28 100.0 33 ............................ CATTGGAATTGTTAGGTTAATCATACCTGTTTA 61098 28 100.0 33 ............................ CTAATCCTACTGAATCGTTTGTTCGTCTAATCG 61037 28 100.0 33 ............................ TTCAACCGATCATGACCACTTACGATGACTACA 60976 28 100.0 33 ............................ TGATATTTGCTGTTTAGTTGGTCAAAAAAGGTT 60915 28 100.0 33 ............................ TATCCGTCGGTTCTCGTACGGAATCCGTCGTAA 60854 28 82.1 0 .............A..CA....A..G.. | ========== ====== ====== ====== ============================ ================================= ================== 6 28 97.0 33 GTGTTCCCCGCGTGTGTGGGGGTGATTC # Left flank : TATTTGGATAAAGCGGACGTAAGCAGTCGCGATAGTCTTAGTCATCTTTTTCTGCCCAATCCTTTATCTCTTCTGGTGTTTTTAAGTCTTTAACTGGCCAGTCGGTGGTTAGTTTCTGGATAGCCAGTTCGTCTTTTTCCCGTTGAGTTAACTCAGCGGGAAAAGGCAATGCTCCCTGAGCGACCAAACGCTTGTAGAACATTGTAATTGCGGTCGTAGGTGTTAAACCGAGCTCGCTGAGAACGGCATCGCCTTCGTCAGCAAGAGATCGATCAACTTGAACGTGGATTCGCTTTTTAGTTGTTTGTGTCATAGTTAATCCCCTCCTAGTTATCTTGTACTCATATTGTACTAGCTTATGAGTAGATTCCCAAGTAAGAAGTACGATGCTTGAAAGATAAGGTTAAATTTCTTTTAGTTTTAGTGGGGGAGAGTAGTTAAGTGATTAAATTTGATAGGTAGTCGATTTACAAACATTGATTTGACGGCGTTTGCTTAGT # Right flank : TCCACTTGTATTTAGTCTATCGGGTGGTATGATAAAGCCAAGAATGTTATCCCTTACAATCCGGTAAGGTGATATCAGCCATAAAAGTTGTTGTATAGAATGCAACGACAGTCAGTTTAGGTGGACTATCCGTCAGTGGTGGTCCGTTTCGTGTGCTCAGGTGATTAACTTAGTCCGAGGAGGCTAAAATGATGCAAGCACAAATGGTGACCTATCCCGTCATTCTTCATCCGGATAACGGTGAGTATAATGTTGAGATTCCCGATATCAATCATGGCACGTGGATCCGTGGCACCAGCGCGGCACAAGCTTTGATTGTTGCGCGTGACATTATTGGTAAGACGTTGGCGCGGGTGACGGACTTACCCGCCGCTACACCATCTGGTGAGTTGGAGTTAGCGGAATATGACGTGGAACACTTGGTAACGGTCAATTTAGCAGACTTTCGGATTCCTGAGACCAGCAGATAAAAGAAGATTTAACGGGCATTCAGTGACGAC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGTGTGGGGGTGATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-11.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 62246-62035 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZDT01000055.1 Levilactobacillus namurensis DSM 19117 NODE_114, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 62245 28 100.0 33 ............................ TATCATTCATCCTGCATTTCCTCTTTCCTGATA 62184 28 89.3 33 ..........T..G..G........... TTGTAGAAGCGTGCTGCACCTTCAATCGTCTTG 62123 28 100.0 33 ............................ CAACAAAATAGCTCATCGAAGTTTTTATATTTG 62062 28 89.3 0 ..........T.....C.........C. | ========== ====== ====== ====== ============================ ================================= ================== 4 28 94.7 33 GTGTTCCCCGCGTATGTGGGGGTGATTC # Left flank : CGGATTTTCGTCGTCGAGGGTTGGCTACGGCACTCATGCAAGCGCTGGTTCAGGCAGCTCGAGATGCGGGTCAGCGGGTCATTCACCTAGACGTATTGACTCGTGATGCGTCAGCAGAGCAGTTTTATCGCCGATATGGATACCGTTTTGTGGAGGAACGAATCTTAAATTACGATGACATTGGTGAGACAGCAGCGCGAATATATGAGCTGATGGCGGATTGAGTAGATTAGCCGCTGGTTTTAGATGAAAGAGGAGTAGCGGACCATCATCCGCTACTTCTGAGTGTGATTAGGGAGTAAGAACGATTTAGGATAAGCTAGCCTTTGTGGTTAGCTTTTTTATTGTAGGGGTATTTAGATAATTGTGGGAAATGGTGTTTTTTAAGATCATACTAGTGGTGGTTGGCTTGAGGGGTAGGTATAATTATAGTTAGATTAAGTGATTAAGTTTGTTGGGTTGTCGATTTAAGAACGTTGATTTGGCGGCGTTTGTTTAGT # Right flank : TCATCAAAAAAGGCCTCGCGATTGCGAGGACTTGTGTTCTCCGTGTGTGAGGGAATTTAGTTTGATGCCTTATTAAGGCGTATGCCGGACTCTCTTTGAACTAATTTGCTTCAGGAACTCGTGAAGACGTGAAGTGTCGGCATCACTCAGTGTGCCAATGTAGCTAATTTTTGTGGTCCCTTTAGTAAGCAAATAAATTTGATAAGCGTCAATCCAGGAGTGTTTCTTTAACCCAGTAGTCAGATAATCCTCGATTTCGAAGTACCACTGTTTCATGAACTTAGACTTGCCTGTGTACTTAGTAGTGATGTCAAAGAAGAAGATTTTGTCTGGTGTTTCACGGAGGATGTAGATGGGCCGACGCTTTCCACCAGGTATTTGGATAAAGCGGACGTAAGCAGTCGCGATAGTCTTAGTCATCTTTTTCTGCCCAATCCTTTATCTCTTCTGGTGTTTTTAAGTCTTTAACTGGCCAGTCGGTGGTTAGTTTCTGGATAGCC # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTATGTGGGGGTGATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-11.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 68149-67706 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZDT01000055.1 Levilactobacillus namurensis DSM 19117 NODE_114, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 68148 28 96.4 33 ...............G............ CAATAACAAGCAAAACAGTTTACTCTGTTAAGG 68087 28 96.4 33 ...............G............ CTCATCAATTCGATTTTGCAATTTCATGGTCGC 68026 28 100.0 33 ............................ CTGTAATTTCGTAGCCAACGACTTTCCGGCCGT 67965 28 100.0 33 ............................ TCGGTAAACTGCTTAGATTAATCAATATGGAAG 67904 28 100.0 33 ............................ CCTGTGCGTCGGTGTACTTTGGTTCAGCACCTG 67843 28 100.0 33 ............................ TGACTACATGCCAGGGTCCTACGATGAATTAGC 67782 28 100.0 21 ............................ CTAATCTCTTCCAATTGGCAG Deletion [67734] 67733 28 71.4 0 T.T..G..T....A.G...A.......T | ========== ====== ====== ====== ============================ ================================= ================== 8 28 95.5 31 GTGTTCCCCGTGTGTACGGGGGTGATTC # Left flank : AGGCGGAAGATCAGATGGCGCAGTGGCAGGCAGATGGCGTCAAGCCGGACGTGATCGTGGTCGATCCACCACGAAAGGGCTTGGCTCCTAGCTTGATTGAAAGTGCCGCTAAGATGGCGCCGCGCAAGGTGGTTTACGTTAGCTGTAACCCATCGACGCTGGTCCGCGACGTGGCCCACTTCGAAGAGTTGGGATACGTAATCGATGGGGACATTCAACCCGTCGACCAGTTCCCACAGACGCCGCACGTGGAATCGGTGACGGTGCTGAAGCGGAAAGACTAAGGTTATGTCAAAATAAAGCGTGCTCGCAGCATCTGACAGTCGTCAGGTGAGCGGGCACGCTTTTTGAGTGGGATGAATTATTGGAATCCTTGTGAGAGATTGTGTTTTTTGGAGGCCATGCATTTGCCGGCTAGCTGGGTGGCAGGTATAATCGTAAGTGATTAAATTTGGCGAATAGCCGTTTTGCGAATGCTGATTTGGCGGTGTTTGTTTAGT # Right flank : TAATCTTTGGCTGGTGAATTAATGACTAACAAAAGGCTGTTACTTTAATCTTGGAAAGGATAAAGTGACAGCTTTTTTAACTAAGAAGTTATTCGGTTAGTCGTAAAATGATAGCTTTAGGGTATACAACTAATGATGGTAACTAAGTCAGTATTGGTATCGTTTGCCGGTATGGGACTAGAAGTTTTTAGATAACGCTTGTTTCAGAAAATCGGGGGTTCGTTGATATTCAAATATGCAGAGATCATTAAGCGGAATGTCCAGTTGGTCGTAAAGTAGTTCTTGAAACAAAGCCATAGTACCGTAGGTGTGGTACTTAATGGCTAGGGTCTGCTCAACGGTTAAGTGTTCCTGATGATAATTACTCATCACGGCCTGCGTGGCCAACTTAAGATTGAACTGGTAGATGTAATGATTAATTGAATTTTGGGAGTTAACTTGGTACACCTGCCGATAAAAGCTCTTGTGGCTGAGAAGTTGTTGGGTTACCTGGATCAATA # Questionable array : NO Score: 2.92 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGTGTACGGGGGTGATTC # Alternate repeat : GTGTTCCCCGTGTGTGCGGGGGTGATTC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.90,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //