Array 1 111900-111032 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFBZF010000017.1 Pseudomonas aeruginosa strain PA15-38 NODE_17_length_112039_cov_63.862846, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 111899 28 100.0 32 ............................ TATGATCATGCCCCGTCCTCCGGCTCCAATAC 111839 28 100.0 32 ............................ TGAAGGCCAACCCGCAAGTCAGCAAGGGCATC 111779 28 100.0 32 ............................ AGGTTCGTGGCGGACCGGAAAGACCTCAACCG 111719 28 100.0 32 ............................ CTGGACGCAAGCAAGATCGTAGGGCGCTGCCC 111659 28 100.0 32 ............................ ACCACCAAGATGGTCCAGGCCGTGCGTTCGAT 111599 28 100.0 32 ............................ GGCCAACCAGATCGTCTACACCGCCAACGTGA 111539 28 100.0 32 ............................ TTGATGGGTTTGTACTCAGGCCCGGAAAACTC 111479 28 100.0 32 ............................ ATCAAGGTCAACCTGGGCTCCGGCGCCGGCGG 111419 28 100.0 32 ............................ AGGTCTTCGAACTCGAACAGCTTCGCGAACTG 111359 28 100.0 32 ............................ TCCAATGCGGCGCGTACTGCCCGCGCCTGCTT 111299 28 100.0 32 ............................ AATGCGTGTCGAGCGTTGGTGCTGGGATGCCG 111239 28 100.0 32 ............................ CTCGATGACGCATATCGCGAGGCGCTGGCCAA 111179 28 100.0 32 ............................ TGTGTACCCCTGCGCGTGGAGCGCGGGGCGAC 111119 28 100.0 32 ............................ GTCATGGGCGAGCTCTACGCCAACCCGCAAGC 111059 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 15 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCT # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGTTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCTGGAGAGCCGGCGGATAACCGCAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //