Array 1 484326-490075 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFUP010000002.1 Clostridium beijerinckii strain DJ091 Ga0423251_02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 484326 28 100.0 35 ............................ TATTGTCCAGCCGTAAGAGTTACCGTTCCAGTTAC 484389 28 100.0 36 ............................ CTGGAATTGAAGGTGCTGTTGGTGAACTTGCTGGTG 484453 28 100.0 36 ............................ GACTATAGTAAAGTGTTGTACTTGCACTTGAAGCTG 484517 28 100.0 36 ............................ TGATTTAACCAGATAGATGTTAATTTCATGGCTTCC 484581 28 100.0 35 ............................ GTTCAACTTTCTTTTTAGTCTTAGTTATAATCACA 484644 28 100.0 37 ............................ TCGATATATATGAAAGATATATTAAAGAAATAGATAG 484709 28 100.0 36 ............................ GTCTATACGACCTTTCCCTCTACCACTTTGTATTAT 484773 28 100.0 35 ............................ TACATTGGATATGTTAATTATTTTGTACCAGTTGC 484836 28 100.0 36 ............................ TAACATCGTCTGATACTCTACAAGCTATAGTTTTTG 484900 28 100.0 36 ............................ TTGGAAAAGGGTTAGTCGTAAAGCGATTAAAAGAGC 484964 28 100.0 36 ............................ CCATAACTACTATTTGTAAGTGTAGTTTTGAAGCTA 485028 28 100.0 37 ............................ ATTTACAAATAGAATTAGAAAAGCAACAGCAGTTTAA 485093 28 100.0 37 ............................ GCAAAAGGAATGTCTGTGCTTGAAGCTATGAAAGCAG 485158 28 100.0 36 ............................ GTTGGAAGTGCAATAGATATTGAATTAAATAAAAAA 485222 28 100.0 36 ............................ CCAGCAGTTGTAGAAGCAATTGACATTTTAAAAATT 485286 28 100.0 36 ............................ TTTTATCACGTGTAAATTTAGCATTTTTTCTTAAAT 485350 28 100.0 35 ............................ ATGATACAGGAACCCAAAAAGAAAACAGTAGATTC 485413 28 100.0 35 ............................ ATTAAAGAGAAGATAGCTAAATTATTAGGATGTAC 485476 28 100.0 37 ............................ ATGAACACTCTTTCCACTCATTTCAGATAGAGCTTGT 485541 28 100.0 37 ............................ GCAATTTCATCTATGCCATTCTTACGCTCTATCGCTA 485606 28 100.0 37 ............................ CACTTATAATATTATTTTTATTTCTTCACACTTGTTT 485671 28 100.0 37 ............................ AGTGCATTTGCTAAAGAATATATGGTTTTTATTCTTG 485736 28 100.0 37 ............................ ACATTTATACCAGTGAAGCTAAAGTCCATCCCTAGAA 485801 28 100.0 35 ............................ TAGTGATATGGAGATGGTTAGAAATTATGTAAATA 485864 28 100.0 37 ............................ TACCTAAATATTCTCTAGCTTCTTTATGACTTAATTT 485929 28 100.0 35 ............................ GTTTTTATTTAAAAATTAAAAAGACGAACTATTTT 485992 28 100.0 36 ............................ CTATACCTATATACATACTGTATTAAACTTAAATAA 486056 28 100.0 36 ............................ TCTAATCCTATGTAATATTGTTCTTTAGTTCCACTG 486120 28 100.0 37 ............................ CATAATAAACATACTTATACACATATATTATAATAGT 486185 28 100.0 36 ............................ ATTTCCTCTAATGTACTACAAGCTTGTTCCATAATT 486249 28 100.0 36 ............................ ATTTTTTCAGCTAATTGATTTAAGGAAAGTTCTTTT 486313 28 100.0 37 ............................ GGCAATTTATCAAAAGCTTCTCCAATATTTCCTATAA 486378 28 100.0 36 ............................ TTTTTCTTTATTGTTCTTTCTGTATTTTCCTCCCAA 486442 28 100.0 36 ............................ TAATAAAGATGGAATGTGTGGCTCTGAATCAATAGA 486506 28 100.0 36 ............................ CCGGACCATTTACCTAGTTTTGCAAGTTGAACCATA 486570 28 100.0 36 ............................ CTAAATTAATATCCAAAGTTTTTGTATTTATGTTTT 486634 28 100.0 37 ............................ TCATTAGTAGCTGCTTTAAAAACATCCGTCTTTGCAA 486699 28 100.0 36 ............................ TAGTTATAGCTAAAACTTATCTTATTGCCTTGTATT 486763 28 100.0 37 ............................ GTTCAATATAGTTATAAGGATCAAAAAAAGAAAGAAA 486828 28 100.0 37 ............................ TTATTTACAGCGTACTTTACTGCGAAAAATGCCATAG 486893 28 100.0 36 ............................ TAATTATTAACTTTGGCACCTGTCATCTGTCCCAAT 486957 28 100.0 37 ............................ CTAACGACAGTAGTCATATCAGGAGCAGTTTCTTCGG 487022 28 100.0 36 ............................ ACTGTAATCATTTCAGAGATTGGCAAGAAATAATTA 487086 28 100.0 37 ............................ ATTACTAAAGGTGAAATGGTGAGTGCTGATGCAGTAA 487151 28 100.0 37 ............................ AAGACATTACAAGGCTTGCAAACAGTCACTAATAAAA 487216 28 100.0 36 ............................ AGCACTAAGGGAGAACGTAATATGGATCAACAAAGA 487280 28 100.0 37 ............................ GAAATTATTTATGAAAATAATGCTGAATTACAGGCTA 487345 28 100.0 36 ............................ TGTCAACACCAAAACAACACTATTAAAAAAAATAAT 487409 28 100.0 36 ............................ AAATATAAATCATAAACAATAAATAAAAACTAACTT 487473 28 100.0 37 ............................ GAAGGTAATGATTCAGATGTTAAATTTGGATATGCAG 487538 28 100.0 36 ............................ ATATTTCAAACAGTTTTTCCTATAATTGGGCAAATA 487602 28 100.0 36 ............................ TGGGAACGTTGGGAAAATATCATAGAAGAATTTAAA 487666 28 100.0 37 ............................ ACTATTTTCTCTAAGTTCTTATCATTTGCAGTATCAG 487731 28 100.0 36 ............................ CTATAAAAAGTAATCATCTTTCTCTAACTCCTAACT 487795 28 100.0 37 ............................ GTTGAAGTAGCGACTAAAGCTTTTCCAAAAGTAGTTG 487860 28 100.0 36 ............................ CGTATAAGAGCATTTATTAAATTTATAAAGAATACA 487924 28 100.0 36 ............................ TCATATAAAGCAAGAGTGGCAAGGTTAGATTTAATT 487988 28 100.0 37 ............................ ACATTTTTGCAAGGATTGAGTGATTATTTAAGCGATA 488053 28 100.0 37 ............................ ATACATTCAACCTCAGAAACTTTAGCACCAATTGAAA 488118 28 100.0 35 ............................ TCGTAAATTCTTGTAGTACCATCACTAGAGTACTG 488181 28 100.0 36 ............................ CCTTATAATAGCATATCAAGTGCAAGTGCATTATAT 488245 28 100.0 36 ............................ TTGCAAATACTCTTTATTTTGGTTAACTATATTTTC 488309 28 100.0 37 ............................ ACAGGAGAAGAAATTACAGTATTACTTAAAATATCTA 488374 28 100.0 37 ............................ TGATAATGCACAAAGTAGCGTTAAAAACTGTCATTTC 488439 28 100.0 38 ............................ TCTTAAAATCAATTAACTTATTGTATCTAAATTATTTA 488505 28 100.0 36 ............................ TTTAATTTCGTGCATCTATTGTTAATAGATATTAAT 488569 28 100.0 37 ............................ ATATAATATTTAAACTCTTCAATTGTATAAACAGTCT 488634 28 100.0 36 ............................ AAAGGAACATATATCATAGATTGTTTAACGGATCTA 488698 28 100.0 36 ............................ AGTAAGTAATCTAAGCTTACATTGAATAGATCAGCA 488762 28 100.0 36 ............................ GTATTAGATAAATCTTGTGCTTTTAAACCACTTACA 488826 28 100.0 35 ............................ CCTATAACGATACAATCATCTACAACAGCAATTGC 488889 28 100.0 37 ............................ AGAGAATTTCTTTGAATAAGTAAAAAATCTTTTACCA 488954 28 100.0 36 ............................ AATAAAGGGGGAATCCATAACGGAAAAGAATAAGAA 489018 28 100.0 36 ............................ TAAATACCTCCTATTTAGTACCAGTAACAACATAAT 489082 28 100.0 37 ............................ AAAATAGCAGTAACAGCCGAAGTAACATTTTCCATAC 489147 28 100.0 36 ............................ CAAACTATAAAATTAATTAACTATGGAGAATTACCA 489211 28 100.0 37 ............................ GCAAATTCAATAACCGTTAATAAGTCATACACTTCTC 489276 28 100.0 35 ............................ ATGAATATTCAAGAAAACAATCTTCACACAATATA 489339 28 100.0 36 ............................ ACGACAAATAATCAACAGTAACTTTATTACGACGAG 489403 28 100.0 36 ............................ TTTTCTACAAGATATCCCAATATGTCATTAAGAGAA 489467 28 100.0 36 ............................ CCAATCAGAGGATTAAAGAAATGATAAAAGAATCTA 489531 28 100.0 38 ............................ ACTTATAGTTCACGTTCTATATCAAATAATTATTATTA 489597 28 100.0 37 ............................ TTTGATAAGCGTTGAATAGCTTCATTTAAGGTTTCTA GG [489614] 489664 28 100.0 36 ............................ TACTCAGTTTTTAGAGTGGAAGTATGGTAATAAAAC 489728 28 100.0 36 ............................ TAGGCTAAAGTGGCAGGGTTAAACTCGATATATATA 489792 28 100.0 36 ............................ GTGCATATTCTGCATTATACAGACCAGGAACAACTG 489856 28 100.0 36 ............................ CATAAAAGAAAATAAGTTGGATGAAGAAATGAGAGA 489920 28 100.0 35 ............................ GTTAAAGCAAGAGCAATTCAACTTATGATATCTAA 489983 28 100.0 37 ............................ GCAAGAGGTCAACATGTTAAATTTGATGGTGAAATTA 490048 28 96.4 0 .G.......................... | ========== ====== ====== ====== ============================ ====================================== ================== 90 28 100.0 36 GTTTTATCTTAACTAGAGGAATGTAAAT # Left flank : AAGCATCTAATAAAAGATGAAAAATATAAGCCATTGAAAGCTTGGTGGTAAAAATGTTTGTAATAATTACTTATGATGTTAACGAAAAAAGAGTAAATAGAGTAAGAAAAGTTTTAAAAAAATATATAACGTGGTGCCAGAATTCAGTTTTTGAAGGGGAAATAACTGAAGGAAAATTAACAAAATGCATGGCAGAAGTTAAAAAATATTTAGTAGACTCAGAAGATTCACTATATATTTATAGGATTCCTTATACAAAAAACATACAGAAGAAAGTTATAGGGATAGAAAAGAATCTAGATGAATTATTTTTATAATTGCAGTAAGCGATTTTTATTACTAGATACATCTAAAGTTAGAAGAAATCTAGATTTGAAGAACATTTTATTTAGTTGCAAAAATCATTACTGTAGCTTTACTGCAAAAATTTATGTTATAATATAAAAAAATGCACGCTCATGTGGCTAAAATAGGTGATTTGAACTATGTATTTTTTCGGG # Right flank : TTAATTTTAAGAGCTTATAAATAACCAAGAGTAGTTGCCAAAAATAAAAAATAATAACTAAAGCCAAAGAAAATTTAAATTTAATTGATTTTTATGTTTACAAAATGGAAGAAAAACTTCTTTAAGTATATGTAAAGCAAATGAGTTAGCTAACCTCAAAGGCTTAATTAAAATTATTTTTATATTTTAGGAGGAAAAAATTATGGGTTATTTAGGAATTAACATGTCAGGATCAAGTATACCAGTATATTCTACAAATATTGAGGATAACACAAGAATAGGAAGTTTGGGATACAAAGAACGATTTGCAGTTACAAGCAGTGGACCAATTGCAATAGTTATAAAGTTTGTAAATTCTTCAGGGAGCTGGGTTGATGGTAGATTAGATCCAGATGCTGATATTAGTGATTGGTGTGAATATTTATTTAGATCAAGCGCAATACCAGCTGGATATTTCCGCACTGATAGTACAGTAAGAATGTATGATTCATCAGGAAGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTTAACTAGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 933478-941773 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFUP010000002.1 Clostridium beijerinckii strain DJ091 Ga0423251_02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 933478 30 100.0 35 .............................. GCAGGTATTGCATTAGCAGCAGTATCAGCGTTAGG 933543 30 100.0 37 .............................. GAATTAAGTCCTGAACAGCAAATGTTTTATGCTAAAC 933610 30 100.0 35 .............................. GGTAAAACCCATGTAAGATGTATATTAAATGATAA 933675 30 100.0 35 .............................. GCTAATAATATAGTCTCTTTTCTGCATCTTCTTCT 933740 30 100.0 34 .............................. TAATTATCTTCCTGAAGGTGGAACAATTAATGAA 933804 30 100.0 34 .............................. ATTGAAACATTACAAAAGGAGATAAAAGAAAGAC 933868 30 100.0 36 .............................. ACTATGAAGTCACCTTCCTCATTTCTTCCTATTGTC 933934 30 100.0 35 .............................. CCCAGCTATAAGACTTATTTTATCAATAATTACTG 933999 30 100.0 36 .............................. TATAATAATACTATAAAGGTGCATTATGGAAAGAAA 934065 30 100.0 36 .............................. TGGCAGAAGGTTTTGGAAAAAAGGCTTAGAGGAAAT 934131 30 100.0 35 .............................. AATAAACTTAATACTATCAAATTTATACCTCCTTG 934196 30 100.0 35 .............................. GCAATTACCCTTAATTCCATTTCTACCCCTCCAAA 934261 30 100.0 34 .............................. GAGTAATGACCATGACCTATTATTCACTGTAGAA 934325 30 100.0 34 .............................. GGAAGCTTAATAGACAAGGATGGAAATGTTGTAA 934389 30 100.0 36 .............................. TGGTGAAGAATTAGGTATTGGAACAATTTCATTTAT 934455 30 100.0 35 .............................. GCTACAGAAAAGTTCTTAAAGCTCTTTTCCGCCTC 934520 30 100.0 36 .............................. ATTATTATTAGTGTTACATCAGTTACAGTAGCCCCT 934586 30 100.0 35 .............................. GGGAGCTGATGTTGTTAGAATTAAAGAACTAATAG 934651 30 100.0 34 .............................. TGGAAGTTCTCTTTAATACAATTAGGTTTTCTTT 934715 30 100.0 37 .............................. CCATAACTGATTATGAAAATAAGAAAGATTTAGTATT 934782 30 100.0 36 .............................. TTAGTCTTATTAAAGAAAAATGGAATTAATTTAGAG 934848 30 100.0 36 .............................. CGCTTTATGAAACTTAAAAGTACACCTTGATAAAAA 934914 30 100.0 36 .............................. CCTAACATACCTTTCTCGAATTTAGCAAAACTTATA 934980 30 100.0 36 .............................. GTGCATTTTGATTGAATCTCATAATTATATAAAGTC 935046 30 100.0 34 .............................. AGTATATGAGCTATATTATATAGATCAAAATGCT 935110 30 100.0 36 .............................. TGAGAAAAGTTGCTCAAAAAGGTGATGTCATATATA 935176 30 100.0 35 .............................. GCAAATGTTATATAAACTTTAATGTAATAACTTCC 935241 30 100.0 34 .............................. GATATAGGTAATGAAATAAGTGATTTTAGAAATG 935305 30 100.0 35 .............................. CAACAGTTACAAATAATGCTACAAACCCCCAAACC 935370 30 100.0 36 .............................. ACTACATTTTCCGAACCTATTAAAATTCTATTTAAA 935436 30 100.0 36 .............................. ACAATAATATCACCAACAGATGCACAATTAGAAGAT 935502 30 100.0 36 .............................. TCATTTCTTTAGCTGTTTTTTCATCTACTCCGTATT 935568 30 100.0 34 .............................. AGAGGATAGAAAGAAGGCTAGGGAATGGCTTATG 935632 30 100.0 36 .............................. TCTGTTAAGGAAAGGAAGTAATAAAAATGAATATAG 935698 30 100.0 36 .............................. GAGTATAAGTATAAACTTTCAGAATTTATATTAAAT 935764 30 100.0 35 .............................. AATAAGTGTTCCATCAATGTTAGTAGAAAAAATAG 935829 30 100.0 35 .............................. GAAACGCTAACAACTACACCAGTTGGAGTTTTATA 935894 30 100.0 37 .............................. ACGATATACATTTCAGGTCTTGTTAATGCTACATGTC 935961 30 100.0 36 .............................. AGGCACACAAAGCTTGGATTTAACAGGACAAACTAT 936027 30 100.0 36 .............................. ATCTCAATTCCCTTATGACTACGATCTTGCTGTAGA 936093 30 100.0 35 .............................. TTCAGTTAATATTGGAGAAATAGAAATCCAAATCA 936158 30 100.0 36 .............................. CCGAAACGAGGTTTAACTGTGGCTTTAGTACCAAAT 936224 30 100.0 35 .............................. ATAAATGTTAAATATGCTGGAGTTGACATAACTAA 936289 30 100.0 35 .............................. ATAACTCAGTTCCACTAAGCCAAGTTATTGAAAAT 936354 30 100.0 35 .............................. AATTATATATAATTTAAGTAAAAAAAGAAAGAGGT 936419 30 100.0 36 .............................. CCTTTCTGCATAGCTCTTACCTCTATTTATTGCTAG 936485 30 100.0 35 .............................. TGCGCAATTGTCAGATAGGGTGAAGATATCTGATT 936550 30 100.0 36 .............................. ATGGAAAGTAGTACCCCGTTGCGAGGATGATATACA 936616 30 100.0 36 .............................. GACACGATATGAAAAGGCTAAGAAGAATAAAAAGAA 936682 30 100.0 34 .............................. ACTAAAAATAAGTTAAGAATAGTTATATTTGCTG 936746 30 100.0 34 .............................. GTTGTTTCAATATGATTAATATTATAATCTTTAA 936810 30 100.0 36 .............................. AATGCATTTAAAATACATCCTTATGAATTGATTGAA 936876 30 100.0 34 .............................. AGTAATGCAAGTATATATTCTTCAAGGTTTTCTA 936940 30 100.0 35 .............................. TCCACAAATACTACTGGCGTTCAGTTTTCTCACGG 937005 30 100.0 34 .............................. TTAAATCCTAAACCCTGCAACTTTTCAAAATCAG 937069 30 100.0 35 .............................. TACTTGGGATAGTGTTACAAGGACATATGCTATTG 937134 30 100.0 36 .............................. ATAAAACAAGCAGTAAGAAAAATTGCTGATAGTGGA 937200 30 100.0 35 .............................. TTGTTAATCATCCTCTCTAAGTTGCATACAAATTT 937265 30 100.0 36 .............................. GTTAGAACCTTGACTAAGAAGATTACTAAGCTAATT 937331 30 100.0 35 .............................. TGGATAATAACAAAAGAAGCTATGATAAGAGTTTA 937396 30 100.0 35 .............................. TAGGGGGCAAATAATATGCCAACTTCGGTAAGTAT 937461 30 100.0 35 .............................. CTTGTGCCATTTCTCCAATAAATTCAGTTTTTATC 937526 30 100.0 34 .............................. TGCTATTTCTGATATTTATAGGATTTTACAACGT 937590 30 100.0 34 .............................. GAAGGAAAGGACGGAATAAGGTTTAAATTAGCAG 937654 30 100.0 36 .............................. GGTAATTGATAGCGAGACCATAGCTAAAAGTGGCAG 937720 30 100.0 33 .............................. TAACCAAATCCTTTATTTCTTCCTGGATAGTTT 937783 30 100.0 36 .............................. TGAACCATTTGACCAGTGGAATATAAACAATAGTCT 937849 30 100.0 35 .............................. ACCATTAAGTCGGCAGGCCGACTTAATGGTGACAT 937914 30 100.0 35 .............................. GTACCTATATTGGTAGTGAATATTTGACAATTTCT 937979 30 100.0 36 .............................. GTACTACCGATAGTTGCTTTTATTTGTGCTGAAAAA 938045 30 100.0 34 .............................. CCATGCATCTTATAGAATTACTTTTCTCAACAGG 938109 30 100.0 36 .............................. ATGAAATCAACATCCCAATCCATAGGAAATGCAAAG 938175 30 100.0 34 .............................. TCTAAAGGTCTTACTAATTCAAAACCAACAATTT 938239 30 100.0 35 .............................. AAAAGAGCATAAGAATCATACAATTGAGCAATTTT 938304 30 100.0 35 .............................. CTTAATGGGTTGTAGTTATTGTACAGAAGAACAAA 938369 30 100.0 34 .............................. ACTCCTATTGTATAGAACGCTTTTGCGTTAGTAT 938433 30 100.0 34 .............................. GTAAATACTTATCTTAGAAGAACTGAAGAGAAAC 938497 30 100.0 34 .............................. GTGACATATACTTTTGATGTAGATACACAAAGTG 938561 30 100.0 36 .............................. GACGAAACCACTATTGCTAATGTAGAAGATTTGGTA 938627 30 100.0 34 .............................. TAAATAAATGTATTTTGTAAAACCAATAGGTCCG 938691 30 100.0 34 .............................. AGAGAATCGGTCTCTATTTTTCTTTTTCCATTCT 938755 30 100.0 34 .............................. AATAGTCCTTCGGGGATTACTAAAAATACAAACG 938819 30 100.0 35 .............................. TTATTAGTAAAAGTCTTCTCTAACGATTCAATTAC 938884 30 100.0 35 .............................. CGATTTATAATAAATAATATTTTAATTATTTCCAG 938949 30 100.0 35 .............................. ATAAATCTATTTCTTACCTCTTAATTTACCAATAT 939014 30 100.0 34 .............................. TTAGCAGTTTCTATTGAAAGAAAGTCTTCTTGTA 939078 30 100.0 36 .............................. AAATTTATTCTGTCATTCTTCATATAAAATAACAAG 939144 30 100.0 34 .............................. ATATGCTGAAATAAATGAACATGCAACTAATATA 939208 30 100.0 36 .............................. CTTAAAATTTTATTAGATGATGCTACAACAGGAAAG 939274 30 100.0 36 .............................. TATGCTCACCTTCTATATTAACAACCTTTAAGACTA 939340 30 100.0 34 .............................. ACTATTCCACCACCAAACTACAAAAAATTTCTAT 939404 30 100.0 35 .............................. ATAGGTGCTGATGTGATATGATCTACTTCTAAAGG 939469 30 100.0 34 .............................. TCCACCATAATTGCAGATTGACCAGGTATTTGTT 939533 30 100.0 34 .............................. AAAAGATAGATGAAGAAAAAGAAGATAGTGACTT 939597 30 100.0 36 .............................. ACTAGATCCAGTAAAAGAGGCAAATGCTGCAGTAAT 939663 30 100.0 35 .............................. CCAGGAGAAGCGTTTAATACAATACAATCTGCATT 939728 30 100.0 35 .............................. ATCTATTATAGATGTAAGAGTTGATTCATCAAGTC 939793 30 100.0 34 .............................. AACGATGCAGTAAAGCAGCTTATAGCAGGTAACT 939857 30 100.0 35 .............................. GCATGGGCATAGAAATGATTAGTTGAAGAAAGGAT 939922 30 100.0 35 .............................. AGATTTAGCGACAGGACAAACTATTGAACTAGAAC 939987 30 100.0 37 .............................. AATATATTTAGTAGACAATAACTACTCACTTTCGACT 940054 30 100.0 35 .............................. ACTAAAAATGCTAATAAGAAAATGTTAACATTTGA 940119 30 100.0 35 .............................. TCCTCAGTTGAGTTAATGCTTCTTTCGAAAAATCC 940184 30 100.0 35 .............................. TCGAAGGTTCACCCATCAATTATTACCTCCTACAT 940249 30 100.0 35 .............................. CCGAAGGTTCACCCATCAATTATTACCTCCTACAT 940314 30 100.0 36 .............................. CCATTAAACGCCAAATCAAGCATATCAACTTTTACT 940380 30 100.0 35 .............................. TCAGAAACTCGGAGACTAAAAAAGCACTACCACCA 940445 30 100.0 34 .............................. GTGGGTAGCAAATTACAACCAATGTGTGGATAGT 940509 30 100.0 34 .............................. GAGTAATATTAATTCGGTCCACCCTGCAGCTGAA 940573 30 100.0 36 .............................. GTGGGCTTATGGTCCACCAGGTACCGAAGGCCCTTG 940639 30 100.0 35 .............................. TATGGAAAACCTTCAGGTAGTATAGCTGGGTTCAT 940704 30 100.0 34 .............................. TAGGTAGCTATTTGTGTGGCGTCTATGCATAAAT 940768 30 100.0 35 .............................. TTAGCTTTTGTGGATTCATCTTTTTGCCTCCTAAT 940833 30 100.0 36 .............................. TTATCACCAAAATTAGGTGACCAATAATCTTCTGAA 940899 30 100.0 36 .............................. AAAGAAAGAAATTACAGGCTTTAGCATTGGAGGAAC 940965 30 100.0 35 .............................. TCATCATCCAGGCATCTTAAATCGGATTCGGAAAA 941030 30 100.0 35 .............................. AGTTGAGCAATAGATGCTAATGACATTCCATTTCT 941095 30 100.0 35 .............................. AGATGGAGAAAAACAAAAAACTAATGAAGAAGGGA 941160 30 100.0 34 .............................. AGCGGTAGTACAACAGGAGACGCTGAATTAATAG 941224 30 100.0 36 .............................. ACTATTTCCATATAAATATCCTTAAGTAATATAGTT 941290 30 100.0 36 .............................. TGTATATCCTTGATCATATAGTATACAATGTTCAAT 941356 30 100.0 35 .............................. ATTTATCTTCAATTTCTTTAAAGAAGTCGATATAA 941421 30 100.0 36 .............................. TTTGGTTTTGATTTGACTAAGTATATCGGAGTTGAT 941487 30 100.0 34 .............................. ACGCTTCATATACGCTATAATACATAAGTACTCC 941551 30 100.0 35 .............................. TGGAGCTTCAGTAAAATATCAAGTTGCCGAAGGTG 941616 30 100.0 34 .............................. TCATTTTGAACATAATCATTATCGTTTAAAACAC 941680 30 100.0 34 .............................. TATCTGACAATTGCGTATTAACGCTAGCCAACTG 941744 30 93.3 0 ........................A....C | ========== ====== ====== ====== ============================== ===================================== ================== 128 30 99.9 35 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : AGACTTTATTCCTTTTAGTTTAAAGGAGGACATGTAATGAGTAAAACAAGCAATTATAATTATGCATTTGTATTTTATGATGTCAATGAAAAAAGAGTACAAAAAGTTTTTAAGGTATGTAAAAAATATTTGTCTCATTTTCAAAAATCAGTCTTTAGAGGTGAAATGTCGCCATCAAAATTAATAAAATTTAAAACTGATTTAAACAAAGTTATTGATAAAAATGAAGATTTTATATGCATAATAAAGCTAATGAATGACAATGTCTTTGGAGAAGAAGTATTAGGAGTAACATCAGGAGTAACTGGCGAAGATCTAATAATATAATTTACCAGGCAAAAAATAATTGATGCAAGAACAAAACTAGATATAATGCTGAGTTACATAAGTATTTCTAGAACATTAAATTTTGGTAGTGGTACTTGGTAAATTTTTGTGAATATGTTACACTAACTACAGTTAGGGCATTATTCTAGTATAAGAATGGGCTTTTTTCTTTG # Right flank : CCAATAACGAACATAAACTTATATAATTTAAGCTCTTGTCAGAAAGTGACAACAAGAGCTTAGCTTTTTTGATTAAATGGATAAATAGAGCCTTATTTCAAAATATTTACGTATTCTATCTATTAATGTATACTTGTATTGAGTACATATTAGATAATATTTTGTTATGAGGGAGTGATAATATGAGTAAATATAGAAGTTCGTACTGTAAAATTTTCATCAACACAGATGAAGAAGAAGAAGTTATATTGAGTTTAATTGAAAAAATAACAATGGGTAGTAAAAAAAGATGGACAATCATCTCGGATTTAATGAAAATAGAATTGATAAACAATGAAGATTTTAGTGAAGAAAAAAGTGTTAAAGAAGAAGACGGTTTTCTATACTCAAAATATTATCTTGGTATTGAGCCTGGAGAAGGTATAAAGGAAGAACAGTATATTACAGGAGTAATAGTCTTGCTGGAAAATCTAAGATCATCAGGATACAAGGTAGTTGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //