Array 1 1385433-1391268 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNKY01000001.1 Nitrosospira multiformis strain Nl1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1385433 37 100.0 36 ..................................... TAACAGGACGGCGAGCAGAAGGTCTCATAATAAAAA 1385506 37 100.0 35 ..................................... GCTTTGCAGAGTGAGAGATTGATCCTCACACTTAA 1385578 37 100.0 35 ..................................... CCACCAGGTGCAACAGATAACATAGGGTTTAGACC 1385650 37 100.0 36 ..................................... ACGTTGATGCGCAGTATTGGACATGCGCTCCTGAGT 1385723 37 100.0 34 ..................................... ATCAGAAGTGAATTTTGTATGCCAGAAATAGTCT 1385794 37 100.0 35 ..................................... TTCATCCAGGCCGAATCCTGGGCATTTGCAAAATT 1385866 37 100.0 35 ..................................... CAATTTTCCGCCCATAATTGTATTGGTGTAGGCGT 1385938 37 100.0 34 ..................................... ATGGAATGAGGCTTTAAATCGCGGATCAATGTCG 1386009 37 100.0 34 ..................................... TTTATAGATTTAATAAGATAGGAACTTATCCACG 1386080 37 100.0 35 ..................................... TTGTGTCTCGTGATATTTGCTGGCGTAGCGTCCGC 1386152 37 100.0 35 ..................................... ATACCATAGTCCGATCGGTACGGACTCAGTTAGGT 1386224 37 100.0 34 ..................................... TCCGAAGAGATCCACGTTGACAAGTACCTGAATC 1386295 37 100.0 34 ..................................... AATTCTGTAGTCATAGGTTATCCCTGTTATATGG 1386366 37 100.0 35 ..................................... ATACCATGCGTCTCCGTCTGTAGAGTTGTGCTGAG 1386438 37 100.0 34 ..................................... TAGTTCCCGCGCGATTATGAAGGATGGCGCATGG 1386509 37 100.0 35 ..................................... GCTGTAGACATTGAACATGCTACCGAAATGGCCGC 1386581 37 100.0 36 ..................................... CGGGATATCCATGACAAACGGACCATACAGACGCCG 1386654 37 100.0 35 ..................................... ACCTCGCTTGCATCTGATCTCTTGCCGACTCTGAT 1386726 37 100.0 36 ..................................... TGGCGCATTTAGATCTGGATATCCAGCAGCCGCCAT 1386799 37 100.0 36 ..................................... CCCGTTTCGAGCCCTCGTATTCCGGTCCGGACAAAG 1386872 37 100.0 34 ..................................... ATGATCGTAGTAATACCTCTCTGATTTGCTCAGC 1386943 37 100.0 34 ..................................... CTCTCCACCAGCCTCTAAGGCATAAGCCAGCCGC 1387014 37 100.0 36 ..................................... GCTTTCGATGGACGTAAAAAAGCCCTCGGGTGAGGG 1387087 37 100.0 35 ..................................... GAGTTCAATCGAATTATCGGCAACGAGCGGATCAG 1387159 37 100.0 34 ..................................... TGAAGCACGGCGGGATTCTTATCCATGCGCGCCG 1387230 37 100.0 34 ..................................... TGCCCCACATCGAAGGTCGTTACCTGGACGACCT 1387301 37 100.0 33 ..................................... TAATGTGCCGCTGCGGATTGAAGAGAAATTGAC 1387371 37 100.0 34 ..................................... CTTAATTGATCGAGCTAGGGCGGATTGCCCCCCA 1387442 37 100.0 34 ..................................... ATGATCACGTGGGAAATGTTATCCGTCATGGTTT 1387513 37 100.0 35 ..................................... ATCCACAATCCAAGCGATGATCGGAGGATTGAAAC 1387585 37 100.0 34 ..................................... TATCACGCCCTCTTTATGTAGAAAATCAATTCGC 1387656 37 100.0 35 ..................................... CCGCGCGAGATGTAAATGGCCTGCCATGGGACGAG 1387728 37 100.0 34 ..................................... CATTTAAATGGCGCACAGACAGAATATGCCCATG 1387799 37 100.0 35 ..................................... GTGTTAGGAATGGTTGAATCTCCATCCGTAATTTT 1387871 37 100.0 34 ..................................... GAACCTGAAGCGGATCAATGAAGTCGAGGCCGAA 1387942 37 100.0 35 ..................................... ACTGTCAACCCACCCCTGAATCATGTTAGCCATGT 1388014 37 100.0 34 ..................................... TATTTGGACATTATACCCCTCATCTACTAAAAGA 1388085 37 100.0 35 ..................................... CATCCTTACCGACACTGGCTTGCTCGACACCGATC 1388157 37 100.0 36 ..................................... ATCGTGATCGCAAGCACCCCGGTTACGGCGTCATAC 1388230 37 100.0 34 ..................................... GACTACACGAAGTATATCCGCTTGGCTGCCAATG 1388301 37 100.0 33 ..................................... CTAATATCGACATGCCTTGTGCGCTCGCGCCGT 1388371 37 100.0 36 ..................................... TGTAAAAGTTCCAGCTGGCAATACTTCCCACTCACC 1388444 37 100.0 33 ..................................... TGCAATGGATTTCTGGAACTCACGCGCGCACAG 1388514 37 100.0 34 ..................................... TTGAGCGCGACGCGCGAGGCGGTACTCGCTATAC 1388585 37 100.0 34 ..................................... CTAAGATTTATCAGGAAACTGAAACTTCTTCTGC 1388656 37 100.0 34 ..................................... GGATATCAGGAGCGTTGGGCTGAGTATCGCTATT 1388727 37 100.0 34 ..................................... GTTTGCATTCCAAGACTGGTGGTAATGAGCTGTA 1388798 37 100.0 35 ..................................... TTGAGCGCGACGCGCGAGGCGGTACTCGCTATACT 1388870 37 100.0 35 ..................................... AGCTTCACCGACTGCAGGGGTTGATCCATGTCGTC 1388942 37 100.0 34 ..................................... ACAAATCCGATATTCAACGATGTCGCATTCCGAA 1389013 37 100.0 35 ..................................... CTCTTCAACAGGTGCTCCATCGTCGGTTGCCTCAG 1389085 37 100.0 35 ..................................... ATCATAAAACCTCCTATAGTCGGGTGGTACATCAT 1389157 37 100.0 34 ..................................... CTGAATAGCTACTAACGCAGCGCGATAGTCCGTG 1389228 37 100.0 34 ..................................... TGAAGCATGGTGTGGTTACCTGGGTTGGACTGGT 1389299 37 100.0 35 ..................................... TGAAAAATCAACCGACATGCCCGCCGATAGCGTTG 1389371 37 100.0 34 ..................................... TGATCGATTGCGCCCTTATCGTCATTAGCCGCCG 1389442 37 100.0 34 ..................................... ATACCCTTATCCCCTGAAAAGGTGCCGGACACTA 1389513 37 100.0 34 ..................................... GTTTGCAACTTCAACAAGATGCTAATTCTATGAT 1389584 37 100.0 35 ..................................... TTTCAGATTCGTACTGTTCGTCCGATGCCGATGTA 1389656 37 100.0 37 ..................................... CAGACAAAATGATAGAGGGGTATACGCATGACTGAAA 1389730 37 100.0 35 ..................................... CCTTTGATGCGCAGTATTAGACATCCGCTCCTGAA 1389802 37 100.0 35 ..................................... GCACTACAGGCGGACGGATGGTATCTAAGGCAAGA 1389874 37 100.0 35 ..................................... CTTATTAAGAACCGCCTGTTCGCCGAGCATGGCGA 1389946 37 100.0 37 ..................................... TGTTTCAAGGGCTGTGACATTGGCGGTCAAGGCAGCG 1390020 37 100.0 36 ..................................... TGCGGCCAAGGTAAACAAGACGTAAAATAATCGTGC 1390093 37 100.0 35 ..................................... TCTGGCTAATGGCACCAGACTGGCTACCTTCCGGG 1390165 37 100.0 34 ..................................... GAACTAATCCGGGCGCAATTGCTGAAGAAAAAGC 1390236 37 100.0 34 ..................................... AATTTGTCGGTGGCGCTCCGGTGACTACATGGCG 1390307 37 100.0 34 ..................................... ATTAGCGCAATGGGCTGTGTCCAGATTGTTTTCA 1390378 37 100.0 35 ..................................... AAATTCATCCACGAAATCATGGCCGTATTTGAAAT 1390450 37 100.0 33 ..................................... GTAGACGCTGCCATTTTCTACCTCGGTGGTTAG 1390520 37 100.0 34 ..................................... GGTTTCCGAGCGCAATTCAACTGGCGAGAACTTA 1390591 37 100.0 34 ..................................... TTGCTGTCGGGCAGACTGATCCATGCCTGATCAT 1390662 37 100.0 33 ..................................... AATAAAGGTCTGATTCAAAGTAGGAAGAGAAGT 1390732 37 100.0 36 ..................................... TCTAATGACTGGGCAAATTACAACGTGGCAAACAAC 1390805 37 100.0 35 ..................................... GTGTATATAAATCCAAGATTCACCGTGGCACGAGA 1390877 37 100.0 34 ..................................... ACTTTCCGGTACCTCTACCACTGGAACAGCGTCT 1390948 37 100.0 33 ..................................... CTCGACGCCGCCAGGTTTGCTGCAGATACCGCT 1391018 37 100.0 34 ..................................... AAAGGTATTAAAGTCTGGCTCCCACATCAGCTTG 1391089 37 100.0 35 ..................................... ATAGGTCGTACCATTGGGGATATCTTCTTCCTCAG 1391161 37 97.3 34 ........................T............ ATCAACTCAACCGTTACCGGGTAGCTCCCGCCGA 1391232 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 82 37 100.0 35 GTAGCGCCCAGCGAACTGGCTGGGCGAGGATTGAAAC # Left flank : GATATATACCCTTTCTGGCGAAGTAACCATGCTCATTATCGTGACTTACGACGTATCAACCGAAACCCGGGAAGGGCGAAAAAGGCTGCGGCGTGTGGCGAAGATATGCGAAGGGATAGGGCAGCGTGTGCAAAAATCGGTGTTTGAGTGCCGGGTTGATTTGATGCAGTACGAAGAGCTGGAGCGACGGTTGTTAGCAGAAATGGAGCAGAAAGAGGACAATCTTCGCATATACCGTTTGACTGAACCGGTTGAGTTGCATGTGAAGGAATACGGAAATTTCAAGGCAGTAAATTTTGAAGGACCTCTGATTGTTTGAGGCGCGCGAACCCTAAGTGATGGCGAAATAGTGGGGGTGTTCGCGCTTTGGCCAGGTATCTGGCAAATATGAGAAATTCCATGCAGATTCTATTTTTCAGATCGCTTATTCGAACTAAGGGCAAGGGGTTCGCGCATTCGCAGGAAAATTTTCTGTTGTATGATGAAGTTGTAGTTGTACT # Right flank : CGCATCTTCGGGATCGATCACCCCATCGGCCCAGGCCGTAGCGCCCGGCGAATTGGCTGTCCTTGCCACCGTAGCGCTGCACGAGTGTCGCTGGCGATAGCCCGGCAACTTTGCCAGCCTAGGCGAAGGTCAGATTGGACGGATCGATGGACAACATTTGATCCAGCACGGCGTCAAGGGGAGCTTCGTTAGATATGCTTTTGGATCTTGCCATGGATAATTTGTAAACGTATATTCATTTATAAAATCAATAGGAGGTTGGAACGAATGGCGAGAATTCTCGGCTATATTGCCTCAAGCCTTGACGGCTTCATTGCGACCGACGATGACAACCTGGACTGGCTCTTCCAATACAACGATATGGATTTGGGAGAACATGACTACAAGTTGTTTATCAAGGGTATCCGTACGGTTGTTATGGGGCGCGGCACCTACGATTTTATCGCCAACGATCCGACTCCATGGAATTATGGAGACCAAAGGGTTTTGGTTGTTACTTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCGCCCAGCGAACTGGCTGGGCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTAGCGCCCAGCGAACTGGCTGGGCGAGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-16.00,-14.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.42,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //