Array 1 983-757 **** Predicted by CRISPRDetect 2.4 *** >NZ_NASY01000039.1 Anoxybacillus sp. UARK-01 Contig39, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 982 30 100.0 36 .............................. ATCAGGAACTCCGCCAACATGGCGAACAGGTTCCAG 916 30 100.0 35 .............................. GGCCAAATTCCAGATGGTTCTATCACGGAACAAAA 851 30 100.0 35 .............................. TTTTCTAATTCGAAGTCCGAAAGAGCCTTTCGAGC 786 30 93.3 0 .................G....G....... | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 98.3 36 GTTTGTATCTTAACTATCAGGGATTGAAAC # Left flank : ACATGACGCTTTAGAAGAGGAACAAGCGTCATGTTGCTGTTT # Right flank : GACATCAAATTGGTCATCGACACGCTAAAAAAGGCTATAAAAAACGAAATGTCAATGGACTCCTCCTACATAGTGATCAAGGATTCCAATATACATCCGTTGATACAACAACGTGCTAAAAAATACAATATAAAAGCCAGTATGTCCAGAAAAGGAAACGGTTTGGACAATGCCTGCATGGAACACTTCTTCCGCCATTTCAAGGCAAAGTGTTTTAATCTATACTCTTTCCGCACGGCCGAAGAGGTGAAGGAGGCCGTACACCAATCTATTCGTTTTTATAACCACCATCGTTTCCAAAAGAAATTACACAACCTGAGTCCTTATGAATATCGGACTCAGGCTGCTTAAATGTGCTTTTTTATTCCTGTCTACTTGACAGGGGTCACTTCACCTTTGGAGTGCTTTTTATTTTAAGAAGGTGGCGCGGGGAAGGGAACGACATTTACGGAAGCGGTATCGAATTCCTCCTTCTCGCATCCATGGTTTGCTGGGGATGT # Questionable array : NO Score: 8.77 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCTTAACTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 1 460781-462664 **** Predicted by CRISPRDetect 2.4 *** >NZ_NASY01000047.1 Anoxybacillus sp. UARK-01 Contig47, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 460781 30 96.7 36 .................G............ GATGTAGACGCACCTAAATCCAACGCGGCTTGCTCT 460847 30 96.7 36 .................G............ TTTCTTGACCTATTTCATCCGTTACAGTCACGTCTT 460913 30 96.7 35 .................G............ TTTTGTACATATATGAACATGTCCAATGACGAAAG 460978 30 100.0 37 .............................. CTAGCGACGTCACCCCGCGCCCAACCTTCACCTTTTC 461045 30 100.0 38 .............................. ATTAAGTCATGTGTAGCTTTTTTAGTAGCTTCTCTACC 461113 30 100.0 35 .............................. ACGCCTTCATCGCTTCTTCAAAGTTGACGTAACGC 461178 30 100.0 36 .............................. TTGATCAAACCAATTCCAAACTACGTATCTAGGTGT 461244 30 100.0 35 .............................. TTCAATGGAAAGATCAAAACATATTCTCTCTCTTT 461309 30 100.0 35 .............................. AGATTTGCTGGAGATGATCTTCAGCTAGACGAATA 461374 30 100.0 36 .............................. TACGGGGTGGTATCCGTTACTATAACTTCGACTTGC 461440 30 100.0 36 .............................. ACTCTTGTCAGAACATACTTATCTTTAGAAATCATT 461506 30 100.0 37 .............................. CAAGGTTTGAGTCAGTACCGTTCAACACCGTTTCGGA 461573 30 100.0 36 .............................. GTTTTTTGAGTTTGTCCTCTTTTTCGTACTTTCTTC 461639 30 100.0 35 .............................. GTAGGAGGAATGAAAGATGGCAGTGTATACAGGAA 461704 30 96.7 36 .................G............ TTGATCATCCCCTTTTCTTAATTCAATCCTTCTTTT 461770 30 100.0 37 .............................. CATCTTTGAGTAGAATCTCTTTAAAGTAGGGAATTAT 461837 30 100.0 35 .............................. CGTATCCTCCTTTCAAGCCCTCGGCTGCTCTTTCA 461902 30 100.0 38 .............................. ACCGATTGATTGACGGTCAAATCCCTCCCCTCAAATAC 461970 30 100.0 37 .............................. TCGCGTAAAAGTCATCGGGTAAGTCGTATTCTCTTGT 462037 30 100.0 37 .............................. CTAGAAATTCCTTGCGCAATACCCTTCGCTATCGAAC 462104 30 100.0 37 .............................. CATGTTCAGCAACCAAACAGTCAATCTCACGTAGATT 462171 30 100.0 35 .............................. TTTTTCTTTGTTGTGTGGAATACTGTCCCGCACGC 462236 30 100.0 35 .............................. AAAACTCTAATTCCTCTTCACACTCATCACAATTT 462301 30 100.0 34 .............................. CAGATACGCTCATGTTGCTTATTGATGTCAATTT 462365 30 100.0 37 .............................. TGTCGGACAACATCTCCTATGCGATACCCTCCGACCT 462432 30 100.0 37 .............................. TATGATAACGTTTTTCTACTTGTTCATGACCAACCGC 462499 30 100.0 35 .............................. AAAGTTAAAGTTAAAGGAACCGAAGATTTGATGCA 462564 30 100.0 41 .............................. GCTGGTGTGAACGAACGGAACGTATTGATGTCCTGTTCCAC 462635 30 93.3 0 ..................C......A.... | ========== ====== ====== ====== ============================== ========================================= ================== 29 30 99.3 36 GTTTTTATCTTAACTATAAGGAATTGAAAC # Left flank : GCTTTTTTTGTATAATTGATGCAAACAACGATTTAAAATTCAAAACATAACCATCCGGTTCAGTAAGATGTTGGGCTCAGACATCTATTATAAGTATTGTTTACAAACAGAAGGAGAGTTTATGTATTAAAGAGAGCAGGGGAAGTCACGTTCTCGGGAAAATAAAAATGGGCTATAACTAACCATTCACATATCTTTTTCTTTTAATCGACTCGTAGTTGAGAACGCTGTTTTACTGAATGAGTTATGAGAGAATAGGCTATTATCTTCATTTTTTATATGCTGTGTTTCCTGAGAATTGCTAATTATTGAAGATCGTACTGGATAAAATTTGTCGTCGACCTCCAATCGTGTAAAAATCCCGGGGGATCGACGACAAATTTCTAACAGCTAAAATTCCCACTGTGATAAGGAAAAGAAGATGTTGCTCGAATTTTAAGATAAGTTTATAATGACATTGTATCCATTTTCCAAATGCTGATTTCATCATCACTTTTGGG # Right flank : CAAAATAAGGAGGGGAGAATGTGGTTCCGGAGATCATCGTTGCGTTGTTTTGTACGCTATATATTGTGATTTTTTTAAACCTTTTGATTCGCTTTGTAGAAACCGAGCGAAAAAAAGGAAAGGTTCTCTTGCCTACGATGGAAGATACCGCTTCAAGAAATCGGTATCGCATCAGAACTTTAAGTTTTGCTCAAAAAAATATGAAGGGCCTATTTTTTATGTTAGGAATCGTTCTTCCTTTGGTCGTGATGATGCTCATCTTTCATACGGGAAATGTTTCCTCCGTTTTCCCATTTTTATATTGGGCATTGATGCCTTTTATTTATTTGAACTTATTTGATTCTTTTGAGATTTGTGAGAATGGAATTTGTGGAGATAAGCTGTACCGTTGGGATGTAATTAAACAAGTTTCATTTGAACCTATCGATATTTTTCATCGTTATTATGGTTTGTTAGAGACGAATGAAACCACTTATGCGATGTGGCTGTACGATAGGGAA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTAACTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 488068-489090 **** Predicted by CRISPRDetect 2.4 *** >NZ_NASY01000047.1 Anoxybacillus sp. UARK-01 Contig47, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 488068 30 100.0 35 .............................. AATAGATCAGATGTTGAAACAGTTGTGAATGCAGC 488133 30 100.0 35 .............................. CTTCTCCTGTTTGTTCATCCATCAATTTTTCACCT 488198 30 100.0 35 .............................. ACCAGCTACTATTGTAACTGGTTTTTCTTTTTCAT 488263 30 100.0 37 .............................. CTTCATATGGCTTCATAATAAACTCCGTACCTTCTTC 488330 30 100.0 37 .............................. GCCAATATTCCGAATGGCATCGCTTTTGCGAAGCAGC 488397 30 100.0 36 .............................. ATGCCAAACTACTAGATAGAGCCGAAGGGATGGCCG 488463 30 100.0 37 .............................. AGGTTAAGTACATGAAAGAAGAAAAGTTCGTGCCGGA 488530 30 100.0 36 .............................. GCCCTTGACCAAGCTAAATTCCAATTCGCTCAAAAT 488596 30 100.0 35 .............................. CCTTTTTCATCACACATTTCAAAGTATTCATCAAT 488661 30 100.0 38 .............................. TTTCCTTCACAAGTTGTCCGTTTTGTTTTTGTGAGCTA 488729 30 100.0 36 .............................. GCTGAATACGAGAAAAAAAGACAGAAAGGTTGGAAT 488795 30 100.0 36 .............................. TTCGCATGATATCTAACGGTCAAAACGGTGTCTTTT 488861 30 100.0 36 .............................. ATTCCTCAATAAACCTCTGCTTCTGCAATATCACCT 488927 30 100.0 38 .............................. TGACTAGTTACCTGCTCAACCGCACCCCACGTAACACT 488995 30 100.0 36 .............................. TTGTTGAAAAGAGGGAACAAACTAAAATCCGTATAT 489061 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 16 30 100.0 36 GTTTTTATCTTAACTATGAGGGATTGAAAC # Left flank : ACAAAGAGTCATAGGATTTGATCTTTTGTCTACACGCGAAAGACAGAAGCGAAATAAGGCTTCTGTCTTTTGTTTGATTATAGGCAAGTTGATTTTCTGCCCTCCTCCATTATTGTTCCGTTTTTTCTGTCCGTTGAACGCCTTTGTTTGCCTCCATTTATCCGAAAAGCTTCTATTGGCCATAGGGAAAGCATACAAATGAATCGGGTAGCAAAAGAATCTACCGCTATCGTGCTTTTAAAACAGTCTACGACTTTGATATTTCAGAAAGATCGAATGGAAAACGTCGCTGCGAGACAATCGATTTCTTGCTAAATCTATTGAAAAAGAGTTGTCGTCGACCTCCAATAGCGCACAAACCCCGGGGGATCGACGACACATGGCCAATCGCCAAAAATCCCACAGCCATATGGAAAAGAAACGATTGATTGAATTTTAAGATAAGTTTATAATGACATTGTATCCATTTTCCAAACGTTGATTTTATCATCACTTTTTGG # Right flank : CTCCGATAGTTTGTAATGCCCCCCATTGTCAAGACACAATTTCGGAAAAAATAAGTTAAGTCCTCCTTCAATTGTAATGGGGAGCGGATGCCGTTAAGCAGTCCGCGCATACACATCTGCCGGCTTGGCGTAACCCAACGCCTGATGGGGGCGTTCGGTATGGTAAAAGCGTAGATAAGCTGTAATCGCCTTGCGAAGCGCCCGAGGGTTCTCATACTCATTCAGATAGATTTCCTCATATTTGAGCGAACGAAAGAAGCGTTCCGTACGGCTGTTATCCCGTGCCCGGCCTTTGCCGTCCATCGATACGTTTACGTTGTGCTTGATCAACAAGTCCAAGTAATCCTGATTCGTAAAATGACTGCCCTGATCGCTGTTCATAATCTCGGGCTGACAGCGCCCCAGTGCCCGTTTCAGGCACGTCAGCACGAACGCCTTCTCCAACGTGCTGGAAAGCTCGTAATCGATGATTTTGCGGCTGTACCAGTCAATGATCACAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTAACTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 7858-6958 **** Predicted by CRISPRDetect 2.4 *** >NZ_NASY01000053.1 Anoxybacillus sp. UARK-01 Contig53, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 7857 30 100.0 39 .............................. ATCGAATGATCCCATTTAGACCGTTTCCGGGTGTAGCGG 7788 30 100.0 36 .............................. TGTCACAAAAGAAAAAGTGATCTATGTTCCGCAAAC 7722 30 100.0 36 .............................. GCGATTTTGGGATCTTCTTTTTTGCCAGGCGATGAC 7656 30 100.0 36 .............................. CCCATTGTTTCTTTGCTTGCCTACGGTCTAGTATCT 7590 30 100.0 35 .............................. TATTTGCTACTCCAGACGTTTGAAAAGTATAATGT 7525 30 100.0 37 .............................. GCAGAAATCTCTATAAAAGCATATGTTGGAGCGATAA 7458 30 100.0 36 .............................. TCGTACGTGGCGCGAAGTAGAAAAGAATCACGCGTT 7392 30 100.0 37 .............................. TAACTAAAGGAGGGAATGTAAGTGATTTTAGGAATTG 7325 30 100.0 37 .............................. CTATAAGTTGGTGAGCCTTGTAGGCTAATAGTGGAAT 7258 30 100.0 35 .............................. CCGAAAAAATCAACGGTACAACCATCGCAACACGA 7193 30 100.0 40 .............................. TGGTAGTATGTCTCCTTGCAAAACCCAATCAGGTGGTACC 7123 30 100.0 38 .............................. ATTAGTTCTTTCCACATTTTTTCTTTCACACACCGAGG 7055 30 100.0 38 .............................. TCAGCTCGATGGTCTTTGACTTTATACCTTCTAGCCTT 6987 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 14 30 100.0 37 GTTTTTATCTTAACTATGAGGGATTGAAAC # Left flank : ACTTATGAAAACCGATATGGCGATAAGCGAACCCATTTTTTTTCGCCGCTTGATCTTGTTTTTTCAGATATGATAGAGAAAAATTTTTGCAATAAGTTTCAAGCCTATTTTCAAGTGCAGCCAACGGAGAGAGTCAAGATTAAGCCGATCAAAGTAACAGAAAAAGATAAAGTGATTACAGCGTTTAAAGATTTCCGTATCAATGCATGGAATGGAACTTATGAAATTCAGGCCCCGCTTGCTTATTTGAAATTTATGTATGATGTTGGGGTCGGTTCCAAAAACTCGCAGGGATTTGGAATGTTTGAGATCATAGAGTAGTTGTATTTCTTTGTCGTCGACCTCTAGTAGCGTACGAATCCCGGGGGATCGACGACAATTTTCTATTTGCAAAAATTCCTATCGTGATAAGAGAAATAAAATATTGATAGAATCTTTAGATAAGTTTATAATAACGTTGTATTGATTTTCCAAATGTTGATTTAACAATATTTTTTAGG # Right flank : CCTAACAGGGATAACATAGAAGGAACGATCTTTTTTGATTGTGTGGGGAAAATAGAAGAATCTCTGATTTCCTTAAAGCTTAGCTGTCGTTATTTCGTGGTAATCGGTTTACCGCTTGCTGTTCGATTCTTTGCTGTGTGCTTTCGTGACAGAGACAAGTCTGTCACCCTCTTCCGATCTTCGGTGTTCTAGGCGGCTTCATTGTATGGATGGCTCCGCCGCCCTTATTTTGTCATCGTCTGCCGTTTTTCCGCTCCTGCTTTATGCGAATCTGGAAAGGAGCGGATCTTTTCTGTTTTTTAGAAAATTTCCCGTTGCGCTTTCGACTTTCACATGTTCTAATAGGAATGATAGTAAAGCGAATGATTGGTTCGCCGATTTTGCATACAATGGAGGGCTGGAAGTTGAAAGATGCAATCATCCGCTTTGAGCGTGTGACAAAGCTGTATGATGGGGTTGCGGTGCTTGACGATGTAAGCTTCGAAATTGAGAGAGGAAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTAACTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 97890-97462 **** Predicted by CRISPRDetect 2.4 *** >NZ_NASY01000049.1 Anoxybacillus sp. UARK-01 Contig49, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 97889 30 100.0 35 .............................. TTTGGAGTGGATATTGTGAAAGAATGGGCTAAGCA 97824 30 100.0 38 .............................. TGTATGTGGACGGTACCGTTTTTGCCGCTCCCATCAGA 97756 30 100.0 36 .............................. ACAAAAACGGCGAAGAGCGAGCGATGAACATCTTTC 97690 30 100.0 36 .............................. CGGAGAATCTTATTTATCTGATCGCGTTTGCTATTA 97624 30 100.0 36 .............................. TGTTTCATAGCTACTACTGCTGTCGTTCCTGCTCCC 97558 30 93.3 37 ................C............C CCGTCCGGATTAGCTATTGAGCTAGAAAATATCCTTC 97491 30 93.3 0 .................A..A......... | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 98.1 36 GTTTGTATCTTAACTATGAGGAATTGAAAT # Left flank : TATACTGGGAAACAAAAATTTACGGACCGTCGCGGAAGAGCTGAACAATTTATGAAAAAATATCATTTGCAGCAGCAAGATAAATAATGGAAGGATAAAGCCGTACGAGACCGACCGGGAGCCAATGGTTTTATTGATGAGGGAGAAAAAATTGTTTCTCATAAACTGTTGAGTAAAAAAAGAGGATTTCTATATAAACCCAGTCTGCCTTTCCAGATGCGCCCGTTTAAAATTTTACTGGGATGAATTGATAAGCCGGATTGATATAGCTTATTGGTCATGCGATCCCCTTCGGATCGCTACGGGGTCTGAACAAAGCACAGATAAAAAATAAAGTCGTCGACCTCCAATGGCGTAAAAATCCCTGGAGATCGACGACACATACATTTTGAATGAAACGGTTGTCCGATCAACCATTGCACAAACATGCACCTCTCGTTATAATAAAACTAACAAATCGTTCCAAAAACCAAAAAGCTTAATCCATCAACATTTGTTGG # Right flank : ATCGTGTGGGATGTTAAGGGATTAGCTGAAAAAGAACGCAGAGCCAGTGTATGGTTCTACGTTCTTTTTTATATAACTTAAACGATCGTTACTTTTTTGTTGAAAAAACAACCTATAAAAAATACAGATAGAATATAGATGTATTAAATAAATACAGGATATTTTTTGTTTTATTGTTGACAATATTCAGACGATTAATTATTATGTTTTATATACGATATTTACAAAAACATAATAAAAAGGGGTGCCTGAAAATGGATAGGCAAGAGGCGGTGTATTGCTCATTTTGTCATTCGGTGGATGTGGCAAAAATGTCTATGTTTGGAACTGCGCAGCTTGTTTCGCAATATTACTGTCATCAATGCAAAAGTGTTTTCGAATGGGTGCGATGGCGGAGGACATTGGATGAAGTAGAGGAAAAGCGATGAAAATCTGAGGGTGCGCTTTGCCTTTTGAACCGCTTGTTAATGGAAAGATTGCTTGTGGAAGGATGCGAAAGC # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCTTAACTATGAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 108322-107499 **** Predicted by CRISPRDetect 2.4 *** >NZ_NASY01000049.1 Anoxybacillus sp. UARK-01 Contig49, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 108321 30 100.0 35 .............................. CTTCGAACGTGTCCTGGCAATAGTGTTCATCCGAA 108256 30 100.0 36 .............................. ACTCTTCACCACCTTTAACTGTTAATACTTGGCAAT 108190 30 100.0 35 .............................. TCATCAATGATGATGGCGTAGTCAACTTTTTCTCC 108125 30 100.0 35 .............................. TAGCGATGGGAAGGAACGATTTCTATTATCTTCTT 108060 30 100.0 37 .............................. CGAGCAGTCTCGCTTGGTGATAATTCTTTAGGGCTGT 107993 30 100.0 38 .............................. AGATTATACGCTCTTCAAAAGCTCTATGAGGACGTTTA 107925 30 100.0 38 .............................. GCAACTGGTTTCTCTACATTAGAAGGTGCATTCGCTGC 107857 30 100.0 35 .............................. ATAAAAAACGGAAATTTAAGTGCAAGAGCAATTGA 107792 30 100.0 38 .............................. CTTTTTGTTCCTCTTCTAAAGCGTCATGTTGCTGTTTC 107724 30 100.0 36 .............................. ATCAGGAACTCCGCCAACATGGCGAACAGGTTCCAG 107658 30 100.0 35 .............................. GGCCAAATTCCAGATGGTTCTATCACGGAACAAAA 107593 30 100.0 35 .............................. TTTTCTAATTCGAAGTCCGAAAGAGCCTTTCGAGC 107528 30 93.3 0 .................G....G....... | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 99.5 36 GTTTGTATCTTAACTATCAGGGATTGAAAC # Left flank : CATTGTCCGCTTTCTGTCAAACGACACACAACGAAAACAAATGGAGCTTGCGGGGCGCGCCTATGCACTCACCCAAAATTGGGAGGTTATTTTCGAAAACTTAATTTCTGAATATGAAAAAGTATGGCGCCACCATGCGGAGAGGCTACATGCATAGCGTGTGGGGAGACAAACAAAAGAATAAGTTTATATACTTTCGATTCATTACAAACTCAAGATGTATTGATATCACTAGCGATGTTTATTTTATGTGTTTTCCGCAACTGATCAAGATCAGGGTTAATTTGCCAGTTTGGCTTCATGCACAGAAGGATGACAAGCTTCTGATGAAAGCTGTCGTCGACCTCCAATGCTGCTAAAATCCCTAGGAATCGACGACAGTTTATTTTTATAAAAAATCTTGGCACAATCAGCAATTGCCCCCATTTCTGATTTTCGCTATAATAAAACCAACCATTCCACCCAACGAGAGAAACACGGCAACATCAACATTTTTTTGG # Right flank : GACATCAAATTGGTCATCGACACGCTAAAAAAGGCTATAAAAAACGAAATGTCAATGGACTCCTCCTACATAGTGATCAAGGATTCCAATATACATCCGTTGATACAACAACGTGCTAAAAAATACAATATAAAAGCCAGTATGTCCAGAAAAGGAAACGGTTTGGACAATGCCTGCATGGAACACTTCTTCCGCCATTTCAAGGCAAAGTGTTTTAATCTATACTCTTTCCGCACGGCCGAAGAGGTGAAGGAGGCCGTACACCAATCTATTCGTTTTTATAACCACCATCGTTTCCAAAAGAAATTACACAACCTGAGTCCTTATGAATATCGGACTCAGGCTGCTTAAATGTGCTTTTTTATTCCTGTCTACTTGACAGGGGTCACTTCACCTTTGGAGTGCTTTTTATTTTAAGAAGGTGGCGCGGGGAAGGGAACGACATTTACGGAAGCGGTATCGAATTCCTCCTTCTCGCATCCATGGTTTGCTGGGGATGT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCTTAACTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 42502-42928 **** Predicted by CRISPRDetect 2.4 *** >NZ_NASY01000016.1 Anoxybacillus sp. UARK-01 Contig16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 42502 30 100.0 37 .............................. TTTTATGAGCGCAAATGATAGAGCGAAATGGCTTGAA 42569 30 100.0 36 .............................. CTGTAACAGACAATGAAGGGGCTATTTCTACACCAT 42635 30 100.0 35 .............................. GTGAATTAAAAGAGTCGTCTAAAAAAAGAATTCTC 42700 30 100.0 37 .............................. TGTCTAAATGTTGAACCCTTATATCCATGCACCCAAC 42767 30 100.0 35 .............................. GAATACGGGGGCACAAGCAATTTTTCTTCTTCTTT 42832 30 100.0 37 .............................. CATCGAACAAGAGAACTTTATAATTGGGATCCGTCCA 42899 30 83.3 0 ................CA...A..AA.... | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 97.6 36 GTTTTTATCTTAACTATGAGGGATTGAAAC # Left flank : ATTTTCGTTCTCATATTGGATACAAAGAATTTTGCAACTTCTTGAGGTCGCTTCCTATCATATCATGAATCTTTCATGGCTATAAATTATTATAAGTGAACAAGTAGATAGATGCAATGTGACATGTTAATTTTGACATAGATCGAGCGTTTGGACTTTTTCTACGGTCGGGCAGACCCATAGCGCCGCTTTATGGAAACGTGGGCGGAGCTGAGGATGGCGTTATTTCCATTTTCGTTGACGAAAAGGCAAGCCCGAATCTAACAAGCTTCGGCAAACTCAAAAATCCTCATTTGTTTTCCTAAAAATGACGTATGAACGAAAGAAAAACTGTCGTCGACCTCCAGTAGCGTCAAAAACCCGGGGGATCGACGATAATTTTCTAACCGCCAGAATTCCTACAGCGATCAGAAAAAGAAGCTATTGCTCGAACTTTGAGATACGTTTATAATGACATTGTATCCATTTTCCAAATGCTGCTTTTATCATTATTTTTGGGG # Right flank : CATTTTGCACGGACAGTGTTTTTACTGCCATCGACGGCGCGTCAATTATAGGGCTGTGGTGATTGAAATGGCTTTAAGAAAACACATCAGGAAACTTAAGATCAAATTTTATGTTGTGCGGTAGATATATGGGGTCTTCCCTCATTACATTTACGTGATGGGGGATAGACCCCATTATTTGTTTATTATCATATAAGCCTCAAGTCTTATTCGAATATACATTTGAGGTCCATTTTGGAACATTCCCTTTTACTGTATTCTTACAATAAGAAAAGGAAGAGTCGCTTGATCTTATTCCATCCAAGTTGTAGATCGAGGCAAAATGTCGGATATTCCATTAAATGGAAGGTGACTGAAGCATTAGATCATGCGTGAGGTTCAGCCGTTTTAAGGGTGCCTGAAAAAGTTGATGGTTCGAAGTAGGGTGAAGAAACTGATGTAAAATTTAATGGGAAAGGAAGGAAAAACATTGGAAAAGAAAATTCCTGTTTTATTAGGTC # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTAACTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 51811-52364 **** Predicted by CRISPRDetect 2.4 *** >NZ_NASY01000016.1 Anoxybacillus sp. UARK-01 Contig16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 51811 30 100.0 35 .............................. CACTACAAGTGGAGCTTGGCGAGTGTGCAAATGAA 51876 30 100.0 38 .............................. TCGCCTCTTGAGAAATCAACCTGTCCGTCGTGGTAGTA 51944 30 100.0 35 .............................. TTAGTGCAATCCGTTAGAATATCGATTCCATGAAA 52009 30 100.0 35 .............................. AAAATGGCGATTTTCTACCATGCATCCCCAACAAA 52074 30 100.0 36 .............................. AGTTGAGATTTATTTTTCATCAAACACACTCCTTCG 52140 30 100.0 35 .............................. AATCCAATTTCGCTTTTCAAATTTCCTTCTACGAA 52205 30 100.0 35 .............................. AAGATCAAGTAATTGGCACGATCAAAGAAAAATTC 52270 30 100.0 35 .............................. AAAATGGCGATTTTCTACCATGCATCCCCAACAAA 52335 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 9 30 100.0 36 GTTTTTATCTTAACTATGAGGGATTGAAAC # Left flank : CTCTCGTTTTTGTTCACGCTTCAATTATGTGCCTCCTTTCGAGGGTATAGGAGTATTTATCATTAATTATAAATACCGACCGTCGGTTTGTAAATAAAAAATTTTATTGGCCAGATAAAATGATCGATTGTGAGATTCCGTGTTGGCATGATGATGATTCGATTGAAAAGAGATAGGCTCGAGCCTGTTTCCTTAAGTGCAGAATTTTGGAGAGGGATAACTGAAAGGGGGAATCTATTTCAGAAAAACGGGGATAGAACACGTATTAAAGAAATTCAACTTTTAGGAAGTTGGTGATTACGTGCGCATCATAGATCCAATATCTCAACTGTCGTCGATCTCCAGTAGCGTCAAAAACCCGGGGGATCGACGACAATTTTCTAACCGCCAGAATTCCTACAGCGATCAGAAAAAAGAAGCTATTGCTCGAATTTTAAGATAAGTTTATAATAAAATTGTATCCATTTTCCAAATGTTGATTTAATCATGGATTGTGGGGG # Right flank : AATCCAATTTCGCTTTTCAAATTTCCTTCTACGAAGTTTTGGTGTTATGTCAAGAAAACGGACACGTTAAACAGAGAGAAATAGCTGAACTTAGGCAGCTACTTTTCTCTGATTAGCGTAGTAAGCAGCCTCAAATTCATATGGCGATACATAGCCAAGAGCTGAATGAATTCTTTTGCGATTGTAGAAGCATTCGATGTACTCAAAAATGGCTTGTTTCGCTTCTTTCCGCGTGCGGAATCGATTCAGATAAATGCACTCTTTCTTGATTAGGCTATGAAACGACTCCATACAAGCGTTGTCGTAACAGTTCCCAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTAACTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //