Array 1 53065-56025 **** Predicted by CRISPRDetect 2.4 *** >NZ_VPFK02000024.1 Saccharibacillus sp. WB 17 scaffold25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 53065 33 90.9 33 ...........T.....A..............C AGCAGCTGCAGCCGATGCAGCAAATGGAAGTCA 53131 33 90.9 32 ...........T.....A..............C GACGCCTCACCGATAGAATACGAGACATTCAG 53196 33 90.9 33 ...........T.....A..............T TGCGCGTTCTTAACCACGTCTTGCTGCGCGACA 53262 33 90.9 34 ...........T.....A..............C TCGCTGGTCGACGTCATTGTGGCTGGCCAGCAGT 53329 33 93.9 33 ...........T.....A............... GGTTTACCAAGACGCAAACCCTACAGTACTCAA 53395 33 93.9 33 ...........T.....A............... GGTTAAGACGGCTCCCAAGGTTAAGCCTTACAC 53461 33 97.0 34 ................................T TCGGAAAGCATCGAAGCCGCAATCATGATGCCGA 53528 33 100.0 34 ................................. GTGCCTTGCCTTGCGGTAGGACATTTCCGGCTGC 53595 33 97.0 33 ................................C GGTCTTGGGGTAGCGTTCGAACGGTTGGGGATG 53661 33 97.0 34 ................................C AGACGCCTACCCGGACGAACACAAAGTAAGCTTG 53728 33 100.0 34 ................................. CGGATTGGTCGGAAGAAATGGTTCGCGACCTGGG 53795 33 97.0 33 ................................C CTGCCCGTGCTAAGTTCTCGTAGTCTTTGTTCG 53861 33 97.0 32 ................................C ATCAGCATTTTCATTTCTTTATATTTGCCCAA 53926 33 97.0 33 ................................G TATTCATCCTCCAGATTATCGAACACCCCGTGC 53992 33 97.0 38 ................................C CGTTCCGATCCGTGACCGAAACGACGGTGCCTTTTACG 54063 33 97.0 35 ................................T GATTTTCCGGCAGAAGATTGATCGAGGTTTCGAGC 54131 33 100.0 35 ................................. CGAAAGTGAAAGGGGAGGCGCCGACCGCAACGGAT 54199 33 100.0 34 ................................. TCAAAGAATTTAAATGCCGCCGCTACGATTCTAA 54266 33 100.0 34 ................................. GCATCTCCCCGTGTACCCGGCCGGTCACTTTTGC 54333 33 97.0 33 ................................T CGCAAAAGAAGAACTGGTAAATGCCTCGTACAA 54399 33 97.0 33 ................................G GACAAGTACATACTCGTATCGTTTCCGCTTGTC 54465 33 97.0 34 ................................C CCGAAAGTATATCCCCGGCGGCGGCCGTCAACCC 54532 33 97.0 34 ................................C GGCTTGGATGACAGCATACAATTGGACTCCTTTC 54599 33 100.0 33 ................................. TTGACTTAATGCTATGGATGCTCAACGGCATCT 54665 33 97.0 34 ................................T CATCACCTGTACCAAAAGCCCAGGCGGAACGATC 54732 33 97.0 34 ................................T TGTCACATCTCAATGGCTGCGCGATCGGCAGCCT 54799 33 97.0 33 ................................G GGTCCCAATTATCCGTACCGGTGAAGAGATCGA 54865 33 100.0 34 ................................. TTTTGTCCCACTTCGCTTTCGATTGGCGAATACC 54932 33 100.0 34 ................................. AGTATGACTCGAAGCCTCGGCCGCTCAAAAGCAA 54999 33 97.0 33 ................................G CTCAATACGGAGTTGATTTACGCACCGCGCCGT 55065 33 93.9 33 .................A..............C AAGCGTCCGGGCCCGGGTGTTCTTCGGGATATT 55131 33 93.9 34 .....T...........A............... TGGTGCGAGCGAGTCCAGCCGTGGCCTTGTAAGC 55198 33 90.9 32 .....T...........A..............G ATGAAAAAGGAAAACCCTGCGGTATCCCTTCG 55263 33 93.9 35 .....T..........................G TGGCTACGTCTACGGGCGGCGACCGCCTTGCATCG 55331 33 93.9 33 ...........T....................T TGTATGATGCCTATGTAGCGCATCGTGATCCGG 55397 33 93.9 33 ...................T............G AGCGCCGTGTCTTTCTTTCTACCCTCTTCTCGC 55463 33 93.9 34 ......T.........................T CTTACGTCGGACGCTTAGAACGCGGCGAATCCAA 55530 33 97.0 32 ................................G CGAATTGGGCTTTCGATCCGTGTCTTGCTTAG 55595 33 97.0 32 ...........T..................... CCTTTCTGAATGTAGATACTCCTCCCTTTCCG 55660 33 97.0 33 ................................G GGGCCCCACCCACCGGGCGCTACCGGCTCTGCA 55726 33 87.9 35 .........T.T......AT............. CGGATTCCTTTGTAAGCCGCTTCGGCGTGACGCTG 55794 33 100.0 34 ................................. GCGCATGATAAGACTTGCCGCTGCCTATAGTGCC 55861 33 93.9 33 ......A....T..................... AGGATCGCATACGATTCCGGCAGATGATGTGTG 55927 33 78.8 33 ...A.....TAT.A.........A........T CGTAGGATAATCACCGCTCAATCACATCTATGG 55993 33 87.9 0 A..................T...........TC | ========== ====== ====== ====== ================================= ====================================== ================== 45 33 95.5 34 GTCGCACCCCGCGTGGGTGCGTGGATTGAAACA # Left flank : CGAGCCGATCGCCAAGCCGAAGCCGAGCCATTTCTGCTCCGTCGGCCGGCTTTCTCCGCCCTGCGGCTTGTTACTTGGATCTGCGTGGCTCCGATCGTGTTCGTTTTGATGTGGACTCATGCTCGATCGCCTCCCGTTTACGAGTGGGTGAAAGGATACATGCCTAAGGCTGCGCCGGTGATTTTGCAGATGCGGGTTGCGGAGTCGGCGCGGCCACCTGAACGTCTTCTACCTTTCATGGTAAAGTAACGCGGGTCCGTTTGCAATTTTGCAGGTATATATGGAAGGTTCCCACGCGGCTTGCACTTGATACGGAGAAAATACGCCTGAAATTGCGAACCTGAAGCTCACATGAAATCCCGGGTAGGTTCGCACTCCGCACCCCGTATGGGATTAAACGATTTAACTTGTATTTTCGTCTCGTTTTGGGTAGGCTGATTTTGAGGTTCGCACTTTTGGGCTCGGGAAGCCTTGTCGGGCTTGGGCTGGAAGGGTGAACA # Right flank : CATAATCCAAAGTGCTTTATAATCGTCACATAAATCGCACCCCAAGCAAGTAATTAAACCCAATCCAAAAAGCCGCAGGATCCAATCCCCGCGGCTTCTTTTTGTTACGTTCTGGACTCGCTTTTCTACAGCAGCAGTAACCCTTCCGGGTCATAGCTCTGCTTCGCGCCGACGTGCTCCACTTTTCGCTTCCAGTTCGCTCCAAGCATGTAATAGCGCAAGCTATCCGTTTGAGGGTCCATGGCAGCTTCAAGCTGCGTTCTCATCTGCTTGAACTGCAGCGGATCAACCAGACATTCAAACACCGAGTTCTGCACGCGTTGGCCGTAATTTTGACAGATTTTCGAGATGGAACGAAGCCGTTTGGCTCCGTCCGGCGAAGTGGTCTGTACATCGTACGTGATCAGCACCAACATGTCGCACCTCCTTCTCTATTCCCTTAGACTCATTTCCACAAAAAAGGCGGATAATCGGCCAGATCTCCTCGAATGTGACGGGCA # Questionable array : NO Score: 5.29 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.25, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGCGTGGGTGCGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 64466-66286 **** Predicted by CRISPRDetect 2.4 *** >NZ_VPFK02000024.1 Saccharibacillus sp. WB 17 scaffold25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 64466 32 100.0 35 ................................ CCATCTTTGAATGCGGCGTCCACGCTGATCAACTT 64533 32 100.0 33 ................................ TTAAAGGCCCATATGTTTTGATGTCTTGGTCTC 64598 32 100.0 34 ................................ TCTGCATTCTGCTGCGCCTGCCATTGTTGGAACG 64664 32 100.0 33 ................................ TCGGCGAAACCTTCGTTGTAGCTGACCTCGATG 64729 32 100.0 36 ................................ GTGAACTGCTGATTCTCTGCATTCTGCTGCGCCTGC 64797 32 100.0 33 ................................ TGCTGTCCAGGCTTGTACGGCACCTTCTCCAAG 64862 32 100.0 36 ................................ AGCTCGACTCGCCATTATTTACCCCTCCAAGCTTCG 64930 32 100.0 33 ................................ TTTCGTCGGAAGTAGTTGTGTCTTGCCTTTCCA 64995 32 100.0 35 ................................ AACAACCCGGGCACGACTAAAACGACAGACCGGAC 65062 32 100.0 34 ................................ CGGGCCCGGCTTATGCTCGAAGAACTCGTGGAGT 65128 32 100.0 34 ................................ ATACCTGTGTTTTCTATGACATAAATTTCCCCGT 65194 32 100.0 35 ................................ TTTTAAGCCTTTGTTTGTAAAAGAGGTTTCAGAAT 65261 32 100.0 34 ................................ ATACCTGTGTTTTCTATGACATAAATTTCCCCGT 65327 32 100.0 35 ................................ AACCCGTACACTTTCGAGACTTAATCGACTAAGGA 65394 32 100.0 34 ................................ TTTTCGAAGAAGAAGTCGAAGAACCCAAGTCCCT 65460 32 100.0 34 ................................ ATTCCAGTTATCCGGCGTCGATGTGTTCGCTTCC 65526 32 100.0 34 ................................ AAGCACGATGGAAAGGCGTTTTGCAGCCGGAACT 65592 32 100.0 33 ................................ GGCAGCCGTTGCGTCAAATCGTCCGTTCTCGTG 65657 32 100.0 36 ................................ AATCCGTTCGATCTGCTCAACCCACGCCGGCTCATG 65725 32 100.0 35 ................................ TACAGGAATCCGCATTGCTCGTCCATTTCTCGTCG 65792 32 100.0 33 ................................ AAGCCCTTTAGGTTTTCGTCAGGGGGCTTGGGG 65857 32 100.0 33 ................................ ATCCAGCTGCGGGATCTTGGTGTTTATCAGGTT 65922 32 100.0 35 ................................ GGCCTTAACTGGCTGTATATCTCTCCAGCGACATC 65989 32 100.0 34 ................................ CTATCTTGGCTGCTCCTGAAATCGCTCTGGGCGG 66055 32 100.0 36 ................................ CGTGTCATATGACCCTGCGATGTAGGCCATACCGAT 66123 32 100.0 35 ................................ GTTCAGCAGCATCCGAATACCGACCGGGCAGGTTC 66190 32 93.8 34 ..........AC.................... CTCATCTTTTTCGCAACGGCCTTTATCGTTATCC 66256 31 84.4 0 .C...-..............C.C.......G. | ========== ====== ====== ====== ================================ ==================================== ================== 28 32 99.2 34 GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC # Left flank : AGTCTGTGCTGAAAAGCCTCCGAGTATTTGCCCAAATCGTGCAGACGTCCCGCAGCCTTCGCCCACTGTTCGGCTCCGAAAGGCTTGGCCATGTCGCCTGCCAACATTTCAACCTCGGTTAAGTGAGTCCGGAGCAGCTGCCACGTTGATTCCGGACCGATCGACTTGTCTTCCCTCTGTTTCGTATGCGCGTAATAGGGCAAGGCTTGTCCTCCTTTGAATGAGTTCGAGGCTATTCTGGATGCTTGCTTAATTAGATTCGGCATTATCCATAAATATCCTTCAAAGAGATTAATTTATTTTATGTACGTCTGCTTGTTTTTATCTCAAACATGCGAACCTGAAGCTCCCATGCTATTCCCAGGAGGTTCGCACCCCTTACGTGATAAGGGCTGCAGCCTTTTCGCTTGTGTTTTTGTCCGCTTTTCGTTAGGCTGATTTTGAGGTTCGCACTTTTGAGGCCGAAACCCATTGCGGGGTAAGGTCTCGGAGTGGGTGCA # Right flank : CAAAGCGACCCTCGCTACATCCAGTTGGAAGTGTAAATTAAAACGAACAAACTATAAGCCTGCATGATGCAGAGCCCATTTGCTCCTAAGGCCTCCTAAACTGATATTGCGCTGCTCTTTTCCTAGAGTAAGCGCGTAGTTGACAGCTTTATATAGAGCGATTAAAATCAAAATAAAATGCATGCATCCGATGTGTATTTTCTTATCTACCCTTTTGATGGGCTGATAGGCATCTGTAACGCAACCTTTCTCGGCTACCAAATTGCTGAGCTGGGTTGTTTTTGTTTTTAAACCTGTTTCACATCTATCTGTTACATTCAATCATTTCTTTTACGTAGTTTGACTTGTTTTTTTTAGACTTCACAATTTTAAAAATGCTATTCTAAAGCTCTTATAAAACTCGGTTCAAAATTCTAAGCCCAACCGACTAAAACATATACTCCCGGGTCGTTCTTCCGAAGGAAGCCTAAACTGGACCTATCGTTCCAACGAATCCCACC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //