Array 1 1198896-1198740 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP043913.1 Staphylococcus aureus strain GHA11 chromosome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	==============================	=================================	==================
   1198895	    30	 100.0	    33	..............................	TGCATGAGCTTTAGCTNNNGNNNTNNNNNNANN	
   1198832	    30	 100.0	    33	..............................	TGCATGAGCTTTAGCTCAGGCGTTCCGCTTATT	
   1198769	    30	 100.0	     0	..............................	|                                	
==========	======	======	======	==============================	=================================	==================
         3	    30	 100.0	    34	AGTTATCAATTTATTGATTACTGTTTCTTA	                                 	       

# Left flank :   ATTTTAGTATCAAAGCGCTTTCTAAAACGATTAACTATCTCACTTTTCTTTTGTTTAGACATTATTTTATCTCCTTTATGTGTTGCTCTTGAATCATCTTTAATTTTACGTTAAAACTATTGATAATTAAAGAAAAAAACTGAGTCGACAATACTGACGACCCAGATGTAAGATTTATTATTTTTCAAGACTGTTAATAAATTTAACAGCATCACCAACAGTGTTGATTTTTTCAGCTTCTTCATCAGGAATTTCAGTACCAAACTCGTCTTCTAATTCCATTACTAATTCAGCGATATCAAGTGAGTCAGCGCCTAAATCATCTTTGAAAGATGCATCTTCAGTTACTTTATCAGCGTCTACACCTAAACGGTCAACGATGATATCTTTTACTTTATCGAAATTTTCCACGTCGATTCACCTCCTTTAAAAATGCCTATACATAGACTATTATATTTTCCCATTTTAAATTCTAAAAAACAAGTAGAAATTTTAGAAAC
# Right flank :  GGGAGAAATTCTGGAACCATATCTTGGTTGCTTAGAATTTCCCCCGCAAAGTTGACTAGGTCAGGCATTTCTCCATTGGATGACCAGTCAACCACTGCGTCAATGAGCTTTAGCTCAAATATATTACATGTACATTCCACCATTTACATGGATTGTTTGACCTGTAATATATTTTGCTTTGTCTGATGCTAAGAACGCTACTGTATTAGCAATATCTGTGTCTTGACCAAAACGTGCTAACGGAATTTGAGTCAACATTTGTTCTTTAAGCTCATCACTTAAAGCATCTGTCATATCAGAAACAATAAAACCAGGTGCAACTGCATTTACAGTGATACCACGAGATGCTAATTCACGCGCCGCAGATTTAGTTAAACCAATAACACCTGCTTTTGTTGCAACATAGTTTGCTTGTCCCGGATTACCTACTGCTCCAACAACACTTGATAAATTAATGATAGCACCACTACGTTGTCTTAACATTTGTGGTGTTGCTTTTT

# Questionable array : NO	 Score: 2.67
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AGTTATCAATTTATTGATTACTGTTTCTTA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:80.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [55.0-80.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.27   Confidence: MEDIUM] 

# Array family : NA
//