Array 1 8411-8983 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRAJ01000011.1 Caminicella sporogenes DSM 14501, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 8411 30 100.0 38 .............................. TAAAAATATTGCCCAAAAGAAGATAAATTTTTTCTAAT 8479 30 100.0 37 .............................. GCATGAGCGTTTATCTCATCAACAATTCGAGACATTT 8546 30 100.0 36 .............................. TAGACGATAGTCACAAAGTTATTTTTGACAACACAG 8612 30 100.0 39 .............................. AATATTATTATCCAGAAATTGAAATTGAATTTTTAGAAG 8681 30 100.0 39 .............................. TGTCCTCAAAATATACGTCTGCTGCAAGGTTGCCAAGGT 8750 30 100.0 40 .............................. CTTGCCATTTCTTTAAACCAATGAATCATAGCTCCTCTGT 8820 30 96.7 38 .................A............ ATAACCGTGCCTTTTGGAAGGTCTGGAGGCAGGAAAGC 8888 30 96.7 36 .................A............ AGTTTTGCAGGTGGGTTTACTTTTCCAAATATTTTG 8954 30 73.3 0 ............T....A......AATTTT | ========== ====== ====== ====== ============================== ======================================== ================== 9 30 96.3 38 GTTATTAGACTACCTATGAGGAATTGAAAC # Left flank : TTGTTATACTTGTATATGATGTTGAGCAGAAAAGAGTTGCTAAGGTACTTAAAACATGTAGAAAATATCTTTATTGGGTGCAAAATTCAGTTTTAGAAGGAGAAATAACAGAAGCAAATTTAATAAAGCTAAAGACAGAACTTAGAAGAATAATAAAAGAAGATAGAGATTCTGTTATAATATATAGATTTAGAACTACTAAATATTCTGCAATTGAAACATTGGGTATTAAAAAGGGTGGAGAAGAAAATATATTATAAATAAAGGAGTATGTAAAATGAAATAATTGTAAAACATGTGTTTAAAATACATATTCAAAATGTCGTCGACCTTCAGTAGTGCAAAAACCCCTGGGGATCGACGACATTTTATTTTTTATCAAAAACGTGTAAATTTCAATATATAGAAGGGTGAAATCATACTAAAATAGTAGGAATTAAGGCGAAAATCAGTTAATTGACGAAAATAAAGAAATGTGGTAGTATCAAGGTATATGATTG # Right flank : TTTTATTTTTGCATAAAATTTTGTTCTGAAATCTTAAATAAATTATAAAAAAGAAAAATCAGGAGGGTTTTTATTTATGAAATCCTATAGAAAAGAATTGTGGTTTAATACTGAAACTAGAAGAGCTTTTATAAATATTACTGCTAAAATAGAAGAATGTTTAAGAGAAAGTGGTATTAAAGAAGGACTTTTATTGTGCAATGCTATGCATATAACATCAAGTGTTTTCATTAATGATGATGAACCGGGATTACATAGAGATTTTGAACGTTTTTTAGAAAAACTAGCTCCAGAGAAACCATATGAGCAATATGACCATAACGGATTTGAAGATAATGCAGATGCCCATTTAAAAAGAACAATTATGGGAAGGGAAGTTGTTGTTGCCATAACAGATGGAAAATTAGATTTTGGACCGTGGGAGCAGATTTTTTACGGAGAATTTGATGGAAAAAGACCAAAAAGAGTGCTTGTAAAGATTATTGGAGAATAAAAAACTA # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAGACTACCTATGAGGAATTGAAAC # Alternate repeat : GTTATTAGACTACCTATAAGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 59286-58918 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRAJ01000013.1 Caminicella sporogenes DSM 14501, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 59285 31 96.8 34 ..............................A ATCTTCAAGCTCAGCGTGTGTAAGTTTGAGGTTG 59220 31 100.0 37 ............................... GCTTTTGTAAATGAAATACCTACTCTAGATAGTGCTC 59152 31 100.0 37 ............................... CAGCAATTGGTTTGAATATATCGTCTATTAAATCAAA 59084 31 100.0 37 ............................... ATCTATTTATAAAACTATGATACGTCCCTAAAGCAGC 59016 31 100.0 36 ............................... TTTCTATGTTTAAGAAGATGTAATGAGTTCCTAAAA 58949 31 77.4 0 G....C...................TT.TTA | A [58920] ========== ====== ====== ====== =============================== ===================================== ================== 6 31 95.7 36 ATTATTAGACTACCTATAAGGAATTGAAACT # Left flank : CAACACCTTTTGGTAGAGAGATAACAGATATGCTTGTAGCAGTGAATAGACCTTATAAGAAGTCTGATTACATACCATGTATAGCTTGGGGAAGAAATGCGAGGTTTTCAGAAAAAATGAAAGTAGGAGATAGAATAAAAATTTGGGGCAGGATACAGAGTAGAGAATATCAAAAGAAAATAGATGAAGAAAATGTAGTTAAAAAGGTTGCTTATGAAGTTTCTATTTCTAAAATGAGTGCATTGCCTGAAGACAATAATAGGTTGAGTGAGTGAAAATAAAATAAAAGTTAAAAATTGTTTGAGGATGTTGTTTTAAAAAGTTGTCGACCTCCAGTAGTGCAAAAACCCCTGGGGATCGACGACTTTTTGTTTTTGATAAAGAATGTGTAAATTTCAATACTTTAAGTATTGAAAACATAGTAAAATAGTATGAATTAAGGTAAAAATCAGCAATTTGACAGAAATATAAGAATATGGTAATATCAATATGTGTAATGT # Right flank : ATATATGATAGAATTTAAACCTTCGTAAAATTAATATTTTGACGAAGGTTTTCATGTTTTTTTGTAGAAAATAAAATTATAAAATGTTGTTATAAAAAATGGCAAAATATAAGAAATTCGGAGGTAGTAATATTTTGAAAATAAAAATTCCTGAAGAAGTAGAAAAGATATTAAATACTTTATATAAAAATGGTTTTCAAGGATATGTAGTTGGAGGATGTGTAAGAGATACTCTTTTAGGTAGAATTCCTAATGATTGGGATATAGCTACAAATGCTAAACCTAATCAGATGTTAAATATTTTTAAGGATTATAAAGTAGTACCGACAGGGATAAAACATGGGACAGTAACTATTATTGTAAATAATAAACAATTTGAAGTAACTACTTACAGAATAGAAGGAAAATATTCTGATAATAGAAGACCAGATAAAGTCGAATTTACAGATGATTTAGAAAAAGATTTAAGTAGAAGAGATTTTACTATAAATGCAATGGCT # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATTAGACTACCTATAAGGAATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 6438-7022 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRAJ01000003.1 Caminicella sporogenes DSM 14501, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================================== ================== 6438 30 100.0 38 .............................. CCTCCTATCTATCTGCTGATGATACAAAGAAAATATCT 6506 30 100.0 40 .............................. AGGTATTTGTAATAATTTAAAAAGGAGTGAAAAAATGCAG 6576 30 100.0 38 .............................. AGGTATTTGTAATAATTTAAAAAGGAGTGAAAAAATGT 6644 30 100.0 35 .............................. GTAACAGTTGTTGAAAATAAAGCAATATTAAAACA 6709 30 100.0 37 .............................. ATGCATCTATCAAAGATTTAGAATTTTGCTCAGCCAT 6776 30 100.0 38 .............................. TACGGTATACCTAAGTCTTGTAAATAAGTAATTACGTC 6844 30 90.0 36 G...C........................T TTAAATTAGCAAAATCCAATAATGACCTGCTCATTA 6910 29 73.3 54 G..........T.T.....-.TT.....GA AATACAATTCTTAATTCTCAATTTTCAATTATCAATTATCAATTCTCAATTATC 6993 30 86.7 0 ........G..........A.....A...T | ========== ====== ====== ====== ============================== ====================================================== ================== 9 30 94.4 40 ATTATTAGACTACCTATAAGGAATTGAAAC # Left flank : GATTGGGAAATAATTTAAACCAAAGAGATGTTATAGCAGTTAGAAAAACAGTTTCTGAACTTGTAAAAATTATATATCCTAATGGAGAATTTAAAAAAGATGATATAGAGGAGATTCTAAAGTACGCTTTAGTTGGGAGAAGAAGGGTAAAAGAGCAATTGAAGAAAATTGGTGGTATGGAATTTTATGATGTTCATTTTTCTTACATAGATAAAGAAAGTTTTAATGAAGAATTTGTAACTGTACCAGAGCAGGGTGGAGGCAAATTAATTCCAGGTAGAATCATTTTTAAAATATTCTGAAATTTTAACTTTTTATTTTGTCGTCGACCTTCAGTAGTGTAAAAATACCTGGGGATCGACGACTTTTTGTTTTGAGCAAAAAATGTGTAAATTTCAATATATAGAGATGTTAAATCATAGTAAATTAGTATGAATTAGCATAAAAAACAATAAATTGACACAAACTAAAAGATATGATAATATCAACATGTGCAATGG # Right flank : TAAAGTATAAGTAAACATTTTAAATTTTTTAGTTGCATAAATCTAAATATTTATTTATAATTCTATTTACATACTAAAATTTTAAGTATGCTTAATTGTATAATATCGACACTAGCATGAAGCTAGTGTTTTTATGTTTGTTTAAAAATTTCAATATAAAAAATATAATATTTAAACAAAATAAAATTAAAATACACAGTGAATTGAAAATTATTTACAGCAAAAATACTGGAGGGGAATGAAATGATTTTTGTTTTTGGACATAGAAATCCTGATACAGATTCTGTTGCTTCTGCAATAGCTCTATCATATTTAAAAAATAAATTGGGATACAATACAATTCCTTGTGTACTAGGAGATTTAAATAAAGAAACGGAGTATATATTAGATAAATTTGAAATTGAAAAGCCTAAACTGCTTGATAATGTAAAAACTCAAATAAAGGATTTAGATTACGATAAAGTAGATAGTATAGGACCTTACGATACAATATTAACGGC # Questionable array : NO Score: 8.89 # Score Detail : 1:0, 2:3, 3:3, 4:0.72, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATTAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [75.0-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //