Array 1 16-900 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVHX01000019.1 Serratia marcescens strain AS012299 AS012299_19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 16 29 100.0 32 ............................. TACGTCAGCGCCGGGAAATAGATATCTTCGAT 77 29 100.0 32 ............................. GTGGCCGAGCAGTACAAGATTAACAGCGTCAA 138 29 100.0 32 ............................. CGTCCGGGCCTGGTTCGCACCACTTTTCCCAC 199 29 100.0 32 ............................. GTGACCCGGACGGGATTAAATTCATCCCGATC 260 29 100.0 32 ............................. TTGGCGCTTATCCAGCAGTTCGAGACTGAGAA 321 29 100.0 33 ............................. CCGTCCATGATCCACGGCTGCAGGGAGCCGAAC 383 29 100.0 32 ............................. ATCGCCCGGGTAATATCGGTCGATGGTAAACA 444 29 100.0 32 ............................. CAAACCGATCCAGTGATGCCGCGTGGCGTTGC 505 29 100.0 32 ............................. TCCTGGATCATATCGGCGCAGCCCAATACGGT 566 29 100.0 32 ............................. TCCCTTCGCCTCACACCATGCCTTGGGGAATA 627 29 100.0 33 ............................. ATTACAGTAAAACCGAGATCGCGCCGATGTTGC 689 29 100.0 32 ............................. GCGAAGCCCTCGGCGACTGCCGCGTATGGGTT 750 29 100.0 32 ............................. CCAGGCCAAAATATTCGAGTTGTCGGGGCTGA 811 29 100.0 32 ............................. GCCAAAGATGCCGAGGGCATGAAACGTAAAGA 872 29 96.6 0 ....................A........ | ========== ====== ====== ====== ============================= ================================= ================== 15 29 99.8 32 GTGTTCCCCGCGAGAGCGGGGATAAACCG # Left flank : CATGAAACGTAGAGAG # Right flank : GCATGTTCGCGATTTCTGGTTGCGGGGAATGGCGAAAGGTTCGTTCGGAACGGCGTGCATTGCCGCAAACAATGGGAATGCCGGAGTACCCGGATTGTCAGGTGCCACGGGATCTCACCCGAGAGGGGGGCTGCGCGGGCTTGAGAAGCCCTGCATCAGTACATCTATGAAGTGGGGGCTTGAGGATTATTAAAGATATGGTATTGTATAATAACCGTGATAATCAGCAGGAGGTCAATCCATGAACGTCGTTCACGACCATCCAGGGGTCTCTACTCTTGTTGGAACCCCAAAAGAAATACAGGACAAGCTCCGGAAGTCGCATGCCGACAAGGTGATGGTGCTCACTTTCGAGCACATGAATGCCCATGTGCTGAAGACCTTGGCCGAGAACATGTCAAACGTTGCCTCGTCGATGTTCGAAGTGCTGCTGACACGGCAGGATCGCGAAGTCGTAGAGCTTCTGGCTGACGCGCTCGTTCCGCGAAAGCCGGCTTCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [15.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 13978-14924 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVHX01000019.1 Serratia marcescens strain AS012299 AS012299_19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 13978 29 100.0 32 ............................. CGTCAGGGCGTCGTCAATTTTCTTTTCCAGAT 14039 29 100.0 32 ............................. ATGTCGAAATCCGCACGACGCCGCCGTCATCG 14100 29 100.0 33 ............................. AACATCCTTGTGGCTGAGCGGTGCGTTACTCGC 14162 29 100.0 32 ............................. CTGTCCGAGCTGGGCAAACTCGAACAAGAAAT 14223 29 100.0 32 ............................. AACGAGAAACGGGCGGCCCGCATTTTGAGTCG 14284 29 100.0 32 ............................. CGGGGTGCGCGGTGGCGGCGGCCACCGTTGAA 14345 29 100.0 32 ............................. AAACCGGCATCACCACGCCGGCCGAGACCTGG 14406 29 100.0 32 ............................. GCGACATTGCGGCAGGCTAAAAAGCTGCGGCA 14467 29 100.0 32 ............................. AATTTAACAAGGCGTTGGCACGTCAACTACAG 14528 29 100.0 33 ............................. AATCCGTCCTTGTCGGTGTAGCCGGAATTATTC 14590 29 100.0 32 ............................. CGCTATCCCATAGGATGTTACGCCAGCTCTCA 14651 29 100.0 32 ............................. CAAAACTTCATTGGTACTCAAGTGGCGCAGGT 14712 29 100.0 32 ............................. GCCCAGGTTAACGGCGCCGTGCCGCTGGTGAT 14773 29 100.0 32 ............................. GGTAACTGGGCCATCATTTGGGCGCTGTTCAT 14834 29 96.6 32 .............T............... CTTAAAAAGAGAACGGGGTGACGCCATGATGA 14895 29 86.2 0 .........................TGAC | C [14916] ========== ====== ====== ====== ============================= ================================= ================== 16 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TTGATTGAGGAGGTTCTGGCCGCGGGGGGAATCGAACTCCCTAAACCTTTTGAAGATGCGCAGCCCCCTGCGATTCCTGAACCTGTTTCGTTAGGTGATGCGGGCCACAGGAGTCGGAACTGATGGGAATGCTGGTTGTCGTGACGGAAAACATTCCTCCACGGCTGCGAGGCCGGTTGGCTGTGTGGCTATTGGAGGTGCGGGCCGGGGTCTATGTCGGTAATACCTCGCGTAAAGTCCGTGAAATGATCTGGCATCAGGTTACCGCCTTAGCGGGGGAAGGTAATGCCGTTATGGCTTGGGCGATGAATAACGAGTCAGGTTTTGATTTTCAAACATGGGGAGAAAACCGGCGTGAACCGGTAGATCTCGATGGGCTAAGGTTGGTCTCTTTCCTCCCTATTGAAAATCAGTAAGTTATCGATCTTTAAAAACATGGAAAAGTTGGTGGAATTTTAGAGTCTTAAAAAGTTCTATTATAACAAACAGTTATGCCTAGA # Right flank : CTTTTAGTGAACGGTATGTCAGAACAATCACTCATCAGTGGCTAAATACCGGCAGTACTTAAAAATAAAACGCTCTCATATCACCCCACCAACTCCAACCCCGCCACGCGGCGCCAGTAGCCGTTGCAGTCGACGTGGTTGGTCAAGGCCAGCGGCTGCTCGCCGCGCTCGTTGGCGCGGAAGGCGTCGATCTGTGCCAGCGTCTCGGCGCCCTGCGGCGACAGTCGCACGATGTCCACCAGCCCCTGCATGCTTGGCAGCTCGTTGCCGAGGTTGTAGCAGTAACCGCTCATGGTCTGGATGCCGTTGAGTACGAACACCTGCTGCTGTTCCTGGGAGCGCATCATGCGACCCTGCGGATACTTGATGCAGCAGGTTTCGCACTCGTCCTTGCCACGGTTTTCCGAGCGGGCGGTGAAGCAGCGCGCCGAATAGGCCAGCGGCAGATGGCCGTAGCTCAGCACCTCCACCTCGAAGTCGTGGCGGAAGCCCAGCTCGTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //