Array 1 57490-55669 **** Predicted by CRISPRDetect 2.4 *** >NZ_SETI01000045.1 Lactobacillus delbrueckii strain LDELB18P2 Contig_45, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 57489 36 100.0 38 .................................... CAAAAATGTTAAATTTAGATTATGCAAAAAGCGCAATT 57415 36 100.0 39 .................................... CGACATCAACAAATGGATCGTAATTGTAGCTATGTTTGA 57340 36 100.0 36 .................................... ATGTAGGAATTGATGATAATGATGAAATTTTTAGTC 57268 36 100.0 46 .................................... ACAAGCCGCAAAGCTTCTAGGAATCAACCCGGACACGCTGAGCAGA 57186 36 100.0 36 .................................... GAGGTAAGATAGAAAAGAGGTAAAAAATGGAGATTA 57114 36 100.0 38 .................................... AACGGGGATTTTTCTGAGGAGTGCTAACTTTTTGGAAA 57040 36 100.0 37 .................................... AGATCTAGATCAATAAAAATCAAAAAATTCTAAAAAA 56967 36 100.0 39 .................................... AAAAAGATGGCTTCAGCAGAAAAAATTTATAACCAGATC 56892 36 100.0 39 .................................... GTAAACAGTGAAAACACTCAAAGTTTTTCTGAATTTATG 56817 36 100.0 40 .................................... GTTTTACGTAAAAAGCGCAATGGGCAAGTTTATTTGGGAC 56741 36 100.0 35 .................................... TTGAATTGCTCAAAAAATTGTCTGAGTTGTACAGA 56670 36 100.0 38 .................................... ATGTTTGAGGAGTATTGTAGTTATTTGCTTGAAGATCT 56596 36 100.0 40 .................................... ATTCTGATCGGGACTGGAGAGCTTTGGCTAAAAGCAAGAA 56520 36 100.0 42 .................................... TAAAAAAGATTTTAAAAATCCCTTGACATGATTAAGGCTTGA 56442 36 100.0 42 .................................... ACTGAAACGGGGTTAAATCCATGGGAACTTTTCAATGAATGG 56364 36 100.0 38 .................................... TTTGATGGAAAAAGACAACGATAAAAACAGTTTGGAAG 56290 36 100.0 37 .................................... GGAGACAAAAAATGGAAACTAAAAAAACTTTTTTAGC 56217 36 100.0 34 .................................... TAGAGTACTAAAAAAAGGAGACAAAAAATGGAAA 56147 36 100.0 36 .................................... AGAAATGAGGTAAAAAATGGATAACTTTAGCACTGT 56075 36 100.0 39 .................................... AGAAAACGAGGCAATTAAAATGAAAGAAACAGTTAATGT 56000 36 100.0 36 .................................... CTGGAGTTTTCATGATGGAGGAATAAAAAAATGAAT 55928 36 100.0 35 .................................... AGAAAATTGAAGACTAAGGAGTTTAAAATGGAAAA 55857 36 100.0 43 .................................... AAAATTTTTGGATTTTATTAAGTCAAGATTTAACGATGATGAA 55778 36 100.0 38 .................................... TCTTCATAATGAAAAGTTTTTTTGTTGCTCATAATTCC 55704 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================== ================== 25 36 100.0 38 GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGC # Left flank : TTTCTCGCCTTCCAAAGTACATGCAAGAGGCATTATCGCCATCACTAGTAGCTTAATTGAATATTTACTGGCTAAACTATTGAGTTTTCAAGGCTTCATAGTTCTTTTTGGTGTGGGAAGTTTAAGTAAGTTAACTAACTCCACTATACTATCACTATCTCCAGAACGCAAGTCTTTTAAAGCATCTTGTACCATCAACAGATACTTAGAAGGCTTTTGATTGCTTAATTTATTCTGCTCTTCGTCAATCTTCTTTAAAATCTCCAAGAGTGAAGTATCGCAATGGATGTCTGTTTCGTTCTTCCAGACGTGATTTGAAAAAAAGACGTGACCTTCGACAGGAACCAATTCCAAAAAAAATTCAAGTTGTAACCAAATTCTTCTTCTAGAAGACGATAATCGATCCTAATCGTCTCTTCATTATCTTTTAGATGGATTACTTCTGGTTGAAAATTAACGCTTTCGATTA # Right flank : AGATCCTGTTTAAAACGTTATTACGTCGCGCATCCCCAAGCATTTGTCTCGTCTAAATCCTGGTCAACGCCCATCAAACAGCATCCCTCTTTGTCCTATTTTTGGACAAAAAAGGCACCTCTGCTAATTGAGAACATATAAATTATACCACACCAGATGCTACACCACGATCACCTTAGGTACTGACACTGCCTTCATTGGTGCGTCTGGACCCAAAATGTTAATCTGCTTGTTATTCACCTCATCTGGCAACAGATATAGAGTTATCATTCCATCATCTGGAACTTCTTTTTTCAAAATCCCAATCAAATGGTCTTTCGTAGTATCTGACTCCACCTCCCGTTCATACAGGCTGTACTGCTTCATGTCAAATCCCAACTCAACCAGCCGTTTCCTGTATTCCGCGGCTTTCTTTCGCTCTTCTTTGGTATTTCTAGGCAGATCAAAGCTTAAAAGAAGTACCATCATTTTCCTCCTTGAATGAAAGTCGGCAACTTCAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.60,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 63379-69631 **** Predicted by CRISPRDetect 2.4 *** >NZ_SETI01000038.1 Lactobacillus delbrueckii strain LDELB18P2 Contig_38, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 63379 28 100.0 33 ............................ CAAAAGTTTACACCAAAAGAAGAACAGCACTTG 63440 28 100.0 33 ............................ ATCACCGGCATGAACAAGCTGGCTTTCGTCTGG 63501 28 100.0 33 ............................ TAATACCATTAATAAAATCATTCGCTTTTTCCG 63562 28 100.0 33 ............................ CCATCTAATAAGTAATGACAATACTCTTCAAAC 63623 28 100.0 33 ............................ TGATCGATAAGCTGGAAGATTGCAAGGGTCTAG 63684 28 100.0 33 ............................ TTCGATCGGCTCCATTGAGGGATACACCGAAAA 63745 28 100.0 33 ............................ TTGATCCGTCCACTGACAGATCTGGCAACCGCT 63806 28 100.0 33 ............................ CTTATGAACAATTGTTTGCTTGGTTGGCGTTTG 63867 28 100.0 33 ............................ GCATCTTCAGTCACTTCTTCTTTCTTCTTGGCA 63928 28 100.0 33 ............................ TTTTTGATTGCCCGGCCGACTACCGGCCGGAGT 63989 28 100.0 33 ............................ CGCTAGAGCTGAGTTCTACACCAACTTTACGAA 64050 28 100.0 33 ............................ TGGGTGGATCACCTCAAACTATTGATGTAACTA 64111 28 100.0 33 ............................ CTTTAAACTCGTTTACGGTAGGTCACACCAGCA 64172 28 100.0 33 ............................ GAAGACAAGCCTGCTGGCAAGCCAATCCAGGCA 64233 28 100.0 33 ............................ CCCAACCTGGGAGGGCGACATCACTAATTGCGT 64294 28 100.0 33 ............................ CAAGCCCTTGATGGTCCAGCGGTTGCCAGATCT 64355 28 100.0 33 ............................ TTAGCATGAGTTTTTTGTAGCTGTTCAATCTTT 64416 28 100.0 33 ............................ TCAAGGCTGCGACAACCAAGCGGAACGCCAAGA 64477 28 100.0 33 ............................ AAAAGTCGTAAAGCGGTAGCCGCAGTTTTCGCA 64538 28 100.0 33 ............................ TCCCAATTCGGGAAAATTTCCCATGGTTTTAAC 64599 28 100.0 33 ............................ TAGCCGCCCCGTCAAGGACATCGGCAAGGTCAA 64660 28 100.0 33 ............................ CATTTTCTCATAGTCCTCACAGTCGGTAGCGGC 64721 28 100.0 33 ............................ ACATCACCAAAAATTATCACGTTATGATAAACA 64782 28 100.0 33 ............................ CATTCTTGAGATACATAGTTAACCGGTTCTCGA 64843 28 100.0 33 ............................ TCCTTTATATGCTTTAAAAACGCGTAAAACGGG 64904 28 100.0 33 ............................ TGGTTAAAAGTATTAGTTCAGAACTGATTAATT 64965 28 100.0 33 ............................ TTGCCAAATCGCCACGCCTTCCATTGACGGGAA 65026 28 100.0 33 ............................ GCTGATAGTGGTTATGTCTTAAACGGTTCTGGT 65087 28 100.0 33 ............................ GAGGAAATGATCTAAATATTTTTGGTGCTATGA 65148 28 100.0 33 ............................ ATGCCAATGACGCCAAAAGATGTTGGGGATATG 65209 28 100.0 33 ............................ TGATCTCAAAACCCCCGCAAAAGCTTGATCTAA 65270 28 100.0 33 ............................ TTTAGAAATTGTAAAAGTCTTTGATGAAACCGT 65331 28 100.0 33 ............................ TACGTGCGAGGTCTTTTGAATCTAAAACAATCA 65392 28 100.0 33 ............................ CATAAAGCCCGCAAATTCATTACCCGACAATTT 65453 28 100.0 33 ............................ CAAAAAGATGCTATGATAAAAAGCGTCAAAAGT 65514 28 100.0 33 ............................ TTTTTTTAAAAAAGGCTTGTACAAAAAGCAAAA 65575 28 100.0 33 ............................ CAAAAAAATGGGGTGTAGCAAAAGCGAAAAAAT 65636 28 100.0 33 ............................ TTTTTTTCGCCTTTGTTGTAAAAGCCTTTAAAG 65697 28 100.0 33 ............................ TGCTAGGCCTTTTTTCCTGCTTATCTTACTTGC 65758 28 100.0 33 ............................ TGATGAAGAGGTCCGGGATCAAATCGCGGCCGC 65819 28 100.0 33 ............................ TTCCTGGGAGTTCGGTTCAGTCATGGAAAAGGT 65880 28 100.0 33 ............................ ATTAAGGATTGACAGATGGCTTGCTAAGATGAT 65941 28 100.0 33 ............................ GCTGATAGTGGTTATGTCTTAAACGGTTCTGGT 66002 28 100.0 33 ............................ GAGGAAATGATCTAAATATTTTTGGTGCTATGA 66063 28 100.0 33 ............................ ATGCCAATGACGCCAAAAGATGTTGGGGATATG 66124 28 100.0 33 ............................ TGATCTCAAAACCCCCGCAAAAGCTTGATCTAA 66185 28 100.0 33 ............................ TTTAGAAATTGTAAAAGTCTTTGATGAAACCGT 66246 28 100.0 33 ............................ TTTTGGGGATCATGTTATACTAGTAAGCGTCAA 66307 28 100.0 33 ............................ TGAAGCTGAGTTACAGTAAATTTTATCTTGATA 66368 28 100.0 33 ............................ TACGTGCGAGGTCTTTTGAATCTAAAACAATCA 66429 28 100.0 33 ............................ CATAAAGCCCGCAAATTCATTACCCGACAATTT 66490 28 100.0 33 ............................ TTTTTTTCGCCTTTGTTGTAAAAGCCTTTAAAG 66551 28 100.0 33 ............................ CAAACATTACGTAGCCGCCTGGAACTTCGTTGT 66612 28 100.0 33 ............................ CTCGGCTGTTGTAAAACTTGGCGCTAACCTTTG 66673 28 100.0 33 ............................ TACTAAAAATGTTTCACGTGAAACATAAATTAA 66734 28 100.0 33 ............................ TCAACGTGCCACTGATCAAGCTCTAGCTCTACT 66795 28 100.0 33 ............................ CGATAAAAACAGTTTGGAAGCTGTGAATAACCG 66856 28 100.0 33 ............................ CATTTTTTGTAGCCTCCTTGTTTTTCTGCCTTG 66917 28 100.0 34 ............................ TGGCCAAGTTTAAGGTAATCCACGACTTTTGGGG 66979 28 100.0 33 ............................ TTTAAGACTACTATTGCCGGTCTTGGTAAAAAA 67040 28 100.0 33 ............................ CGGATGATTGGCAAACCACGGGCAGTTAAGAAG 67101 28 100.0 33 ............................ CCGATCGGCAAAAAACGAAATTCCTCTCTAGCA 67162 28 100.0 33 ............................ TCATCAAAGATCAGACTGAAGGCTATGACTTGA 67223 28 100.0 34 ............................ TCATAGCATCTTTTTGCTTTTTGTGCAAACCCCA 67285 28 100.0 33 ............................ GTTCAATCTCAAACCCTAGATGACCGTCAATGA 67346 28 100.0 33 ............................ TAGAATTAAAGAAACTCACGAAAAGTAGTATTT 67407 28 100.0 33 ............................ AAGCCGCTTGGGCGGCCGCAGACTTCAACCATG 67468 28 100.0 33 ............................ AGAACGAGACAGCCCCGGCCAAGGTTACGGAAA 67529 28 100.0 33 ............................ CTCTTCGGCCAGTGCTCTTGCCATTGCTGTTTC 67590 28 100.0 33 ............................ CTTAGTAGCGTCTACCTTAAATGGATTGTTACC 67651 28 100.0 33 ............................ CATTTTTCTATTTTTTAGTAAAAGCGCTTATAC 67712 28 100.0 33 ............................ TATAACGGGTGTACCGTTTACAAGGCTAACGGC 67773 28 100.0 33 ............................ CATGGACAGCCGATGAGGAGGAAGTGCGCGATC 67834 28 100.0 33 ............................ TAAGCATTATCAAGGGCTTTGATGAGATCATCA 67895 28 100.0 33 ............................ CCTCCTTGTTTTTCTTGTCTTGCTTTTGACGCT 67956 28 100.0 33 ............................ TAGTGTTCCTGGAGAAACAGACCTTCACCTTCA 68017 28 100.0 33 ............................ TTTTTCCCGTCAATTTCAAAAACCGGGCGGTCA 68078 28 100.0 33 ............................ TACATGCTATATAAAGGTATGCTGAATAGTCTT 68139 28 100.0 33 ............................ TTATTTAAAAAGTACTTCTTACCTTTATTGGGG 68200 28 100.0 33 ............................ TACTCCTCAAACATTGCTACAATAACAATAAAT 68261 28 100.0 33 ............................ TACTCCTCAAACATGGATGTCATCACAATCCAT 68322 28 100.0 33 ............................ CACGCTGCATTCTTCAAGGATTCGAACCAAGAA 68383 28 100.0 33 ............................ TTGGTCGGTAACATGGCAATTTACGTTAAACAG 68444 28 100.0 33 ............................ CTCATGCTCTTGCCTACTTTCTCCACTCTTTCT 68505 28 100.0 33 ............................ TCTAGACCTTCAAGCAAATAATGACAATAATTT 68566 28 100.0 33 ............................ TCGAGATCAAAGCCCCAAACGCCGCTCTCGGAG 68627 28 100.0 33 ............................ CAGAAAAAACAGCACAAAAAAGGCCTAGCAAAA 68688 28 100.0 33 ............................ TGCAAGCAAGACATGCAAGTAAGACAAGACAAA 68749 28 100.0 33 ............................ TTAAAAAAAGGCCTAGCATTTTGCTAGGCCTTT 68810 28 100.0 33 ............................ TCTAAGATATCACTCATGCTTACGCCTAAGCCA 68871 28 100.0 33 ............................ CTCGACATCTAACCAGTCGTAGCATTTTTCGAT 68932 28 100.0 33 ............................ TTTACCAGCTGATTGAAAGTAAGACGAACTCGC 68993 28 100.0 33 ............................ CTACACTTAAGTCAACCCGCCAAGAATCAATTG 69054 28 100.0 34 ............................ CGTCCTCTTGGCCCTTTTTTATGCTGGATTCATA 69116 28 100.0 33 ............................ TCAATTTGATTAGCAAGATGATGACTAGAATCA 69177 28 100.0 33 ............................ TTTACAACGCTTTGCCGCCGTTCCTGGTTTGGC 69238 28 100.0 33 ............................ CATATAGCCGCTCTTCCAGCTCTTTGGCCAGGA 69299 28 100.0 33 ............................ TACCATTTGGCCTTGGTAGTAGACTACCGGCAA 69360 28 100.0 33 ............................ TTGTTGGTCTAGCAAGCTTGTGCTTGTTTTAAC 69421 28 100.0 33 ............................ TGGGACTAGACAATGTGCTGAACATGGAGCAGG 69482 28 100.0 33 ............................ CTTATACTAATGCTTCTGCTTCATCTTTCCATT 69543 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 69604 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================== ================== 103 28 99.9 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTGGATAAGGAAGGCGTTCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAATAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : CGTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGGTAATAGGGAAGGAGTGAGGAACAAGCGTGAGCATTTACGGAAAGTATGCCGACTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAGGAGAAGAAAGCATGACGCAAAAGTGCGAGAGAAAAGGTATGCCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGCTCATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 417-1269 **** Predicted by CRISPRDetect 2.4 *** >NZ_SETI01000094.1 Lactobacillus delbrueckii strain LDELB18P2 Contig_94, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 417 35 75.0 39 .C.T.....C...G.G.-...G...T.T........ GCATAGTGCGGATTGTAAGTAGCGACAAGCTTTGTTGCA C [430] 492 35 80.6 35 C..-.T.C......T...................AT GTGCAAAGCAGAATGAGTCTCCGTAAGGAATAAAA C,G [521,524] 564 36 94.4 41 ....C..C............................ GCAAGTGGTTACTGGGTATCTGATGACGGGAAACTGTTTGA 641 36 100.0 40 .................................... CAAGAGCAAATTCTACAAATAAAGGAGGTGATGGTATGAG 717 36 100.0 40 .................................... CCAAGGCACAAGGAAACTATTACGGGGCATCATGCTTGAT 793 36 100.0 37 .................................... CATGAAAAAAGGTCGGCCAATTTTGGCAAGAAAATAT 866 36 100.0 37 .................................... GGAATAGAAATGGTATCAATTTGGGAGACTGTTTGCT 939 36 100.0 38 .................................... CTTGGGTGATCCCAACAAAAAGAAGTACTTCAACTAAG 1013 36 100.0 37 .................................... CGTGAACTCGCAGAAAAGGCTATGCAATAATTTTTTT 1086 36 97.2 39 ....................T............... CTTACTGCTAAAACAATAGTGTTTTGAAAGTCTGTCCCT 1161 36 100.0 37 .................................... GAATTTCTTGATGAATACGGCAATATGGAAATTTTGG 1234 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 12 36 95.6 38 GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGC # Left flank : GACTAGAGCAGAACATCATTTGCTTCAAAAAAAGCACTAAACAGACGTGTTCTGTTTAGTGCCTTCATCAAACATATGTAAGATTTCTTGACAAGCATCAGTAAGATTTGACAAAGAGCCTAAATAAAGTCCCATAAACTGATTAATCCCATCTTAGCATTGCTAGGATGGGATTTTAATATACTCTGCTATTGGGTGCTTACCAAGCATCAGTAAGATTTGACAAAGAGCCTAAATAAAGTCCCATAAACTGATTAATCCCATCTTAGCATTGCTAGGATGGGATTTTAATATACTCTGCTATTGGGTGCTTACGAAAAAACGGCCAGCAACTGGCCGTTTGGCTTATGTCTCCTTTTAACGGAGATTGTGCATTGAAAATAGATTGATTAATAATATAGCTCTTTTCTTTAAATG # Right flank : CTTAGTGGTATAGTCACCATTAAAATATTTATCAAAGTCCATGTTACTCGCCACCATGCATACTCTTTTCTGATTTGTAGGCGGCCCAGAGCACAAAAGGCATTACAAATAAGCCAGCCAAGCCGACAAGAAGTCCCAAAGCAGCTCCCAGTGGTGGAAATACGATAAATAAGATTAACAAAACCCATAAAAATTCCATGATTACTACACTTCCTATTTTTGTCTATTGTCATCATCGTGCGTGGCTTTGTGAATATCGATCATGTTAGCCACAAAGACTATAATTATAGCCAACGGAATTGCAAAAATACCAAGAAGCAGACCAAATCCTGTACCAAAAGAAGGAAATAAAATTAAAAGAATTAAAAGGTACCACAAATATTTCTTCATAATGACCACACTTTCTATTATTCTTCGTTAGCTTCGATTAAGTTACTTAAACTTCCCACTTACAAAAGTGGGCTTGTACCTTGAAAATTCAATAGTTTAGCCAATAAAAA # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //