Array 1 382-1 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CUHP01000201.1 Staphylococcus haemolyticus strain 643, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                                                                               	Insertion/Deletion
==========	======	======	======	=====================================	==============================================================================================	==================
       381	    37	 100.0	    34	.....................................	TAAAGGAATTGATAACAATGCAATTAGATTTTAA                                                            	
       310	    37	  97.3	    36	G....................................	TGATACTTGTTCAGTAGAGAGTGGGGTGCTAGTATG                                                          	
       237	    37	 100.0	    33	.....................................	GGAATACATCGACCACTTAGATAATAACATTCT                                                             	
       167	    37	 100.0	    94	.....................................	ACAGGATTGTATCTTTTAATAGAGAACAACACTATTAATTCTTTCGGGGTAGTTATCGATCCAAGATCATAGATGATCTGAAAGGGTGGAAAAA	
        36	    36	  97.3	     0	....................................-	|                                                                                             	
==========	======	======	======	=====================================	==============================================================================================	==================
         5	    37	  98.9	    50	AATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC	                                                                                              	       

# Left flank :   TATCGATCGAAAAAATTATGATTACATTAAATGAATACATTACA
# Right flank :  T

# Questionable array : NO	 Score: 4.48
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-1.52, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AATTCTCGTCCCCTGTTATTCGGGGTAGTTATCGATC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:54.05%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.80,-7.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [0.0-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.68   Confidence: LOW] 

# Array family : NA
//


Array 1 360-37 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CUHP01000281.1 Staphylococcus haemolyticus strain 643, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	=====================================	===================================	==================
       359	    37	 100.0	    34	.....................................	TAAACCCGTTCAATTCGTTATCTTTAAATTCTTG 	
       288	    37	 100.0	    35	.....................................	CAACTTCGTCATCTTTCATCATTTCTCTTACATCA	
       216	    37	 100.0	    35	.....................................	TATTTCTTCCATGAATAACACCCTCCTTTTTTCTA	
       144	    37	 100.0	    34	.....................................	AGTTAACGGCATTACCTAATAAAAATATTTTAGG 	
        73	    37	  94.6	     0	...................................CT	|                                  	
==========	======	======	======	=====================================	===================================	==================
         5	    37	  98.9	    35	GATCGATAACTACCCCGAATAACAGGGGACGAGAATA	                                   	       

# Left flank :   TAG
# Right flank :  TCATCTTTCATGTCACTGATTAATTCATTTGTAGATC

# Questionable array : NO	 Score: 6.01
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GATCGATAACTACCCCGAATAACAGGGGACGAGAATA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:54.05%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-7.00,-7.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [41.7-5.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,0.78   Confidence: MEDIUM] 

# Array family : NA
//